RNA–Protein interactions for RNA: ENST00000349556.4

FGFR1OP-201, Transcript of FGFR1 oncogene partner, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FGFR1OP, Length 1,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1OP-201ENST00000349556 ODF1Q14990 250 aa9.62□□□□□ -0.87
FGFR1OP-201ENST00000349556 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
FGFR1OP-201ENST00000349556 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
FGFR1OP-201ENST00000349556 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
FGFR1OP-201ENST00000349556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
FGFR1OP-201ENST00000349556 XGP55808 180 aa9.61□□□□□ -0.87
FGFR1OP-201ENST00000349556 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
FGFR1OP-201ENST00000349556 PRSS2P07478 247 aa9.6□□□□□ -0.87
FGFR1OP-201ENST00000349556 LINC01561Q8N1V8 128 aa9.6□□□□□ -0.87
FGFR1OP-201ENST00000349556 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
FGFR1OP-201ENST00000349556 F8VRH5 84 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 H3BRM9 83 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 NDUFA1O15239 70 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 Q6ZSA8 131 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 FAT1Q14517 4588 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 CDK2AP2O75956 126 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 COX7B2Q8TF08 81 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 MAP1LC3CQ9BXW4 147 aa9.59□□□□□ -0.87
FGFR1OP-201ENST00000349556 A0A096LNI7 61 aa9.58□□□□□ -0.88
FGFR1OP-201ENST00000349556 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
FGFR1OP-201ENST00000349556 Q8IZM0 81 aa9.58□□□□□ -0.88
FGFR1OP-201ENST00000349556 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
FGFR1OP-201ENST00000349556 CKS1BP61024 79 aa9.57□□□□□ -0.88
FGFR1OP-201ENST00000349556 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
FGFR1OP-201ENST00000349556 KRTDAPP60985 99 aa9.56□□□□□ -0.88
FGFR1OP-201ENST00000349556 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
FGFR1OP-201ENST00000349556 IGLV5-39A0A0G2JS06 123 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 SYS1-DBNDD2H3BUS1 97 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 HIST3H2BBQ8N257 126 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
FGFR1OP-201ENST00000349556 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
FGFR1OP-201ENST00000349556 S100A6P06703 90 aa9.54□□□□□ -0.88
FGFR1OP-201ENST00000349556 DPH3Q96FX2 82 aa9.54□□□□□ -0.88
FGFR1OP-201ENST00000349556 DPM2O94777 84 aa9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 IGKCP01834 107 aa9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 SNRPEP62304 92 aaKnown RBP9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 GAGE2EQ4V326 116 aa9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 GAGE2DQ9UEU5 116 aa9.53□□□□□ -0.88
FGFR1OP-201ENST00000349556 PLNP26678 52 aa9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 Q6ZRP5 223 aa9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 HIST1H2BLQ99880 126 aa9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 KRTAP4-8Q9BYQ9 185 aa9.52□□□□□ -0.89
FGFR1OP-201ENST00000349556 A0A087WYN8 130 aa9.51□□□□□ -0.89
FGFR1OP-201ENST00000349556 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
FGFR1OP-201ENST00000349556 F8WDY8 70 aa9.51□□□□□ -0.89
FGFR1OP-201ENST00000349556 S100A2P29034 98 aa9.51□□□□□ -0.89
FGFR1OP-201ENST00000349556 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
FGFR1OP-201ENST00000349556 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
FGFR1OP-201ENST00000349556 CIRBPQ14011 172 aaKnown RBP9.5□□□□□ -0.89
FGFR1OP-201ENST00000349556 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
FGFR1OP-201ENST00000349556 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
FGFR1OP-201ENST00000349556 STPG4Q8N801 248 aa9.5□□□□□ -0.89
FGFR1OP-201ENST00000349556 CXCL5P42830 114 aa9.49□□□□□ -0.89
FGFR1OP-201ENST00000349556 TMA7Q9Y2S6 64 aaKnown RBP9.49□□□□□ -0.89
FGFR1OP-201ENST00000349556 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
FGFR1OP-201ENST00000349556 ATOH7Q8N100 152 aa9.48□□□□□ -0.89
FGFR1OP-201ENST00000349556 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 KRTAP4-5Q9BYR2 181 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 A0A1W2PNN7 141 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 PFN2P35080 140 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
FGFR1OP-201ENST00000349556 C5orf52A6NGY3 159 aa9.46□□□□□ -0.9
FGFR1OP-201ENST00000349556 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
FGFR1OP-201ENST00000349556 PKIGQ9Y2B9 76 aa9.46□□□□□ -0.9
FGFR1OP-201ENST00000349556 A0A0U1RRA0 63 aa9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 HERVK_113P61574 105 aa9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 Q8N1X5 172 aa9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 PLAC8Q9NZF1 115 aa9.45□□□□□ -0.9
FGFR1OP-201ENST00000349556 LEPROTO15243 131 aa9.44□□□□□ -0.9
FGFR1OP-201ENST00000349556 Q5VSD8 79 aa9.44□□□□□ -0.9
FGFR1OP-201ENST00000349556 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
FGFR1OP-201ENST00000349556 C20orf202A1L168 122 aa9.43□□□□□ -0.9
FGFR1OP-201ENST00000349556 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
FGFR1OP-201ENST00000349556 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
FGFR1OP-201ENST00000349556 J3QQQ9 107 aa9.42□□□□□ -0.9
FGFR1OP-201ENST00000349556 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
FGFR1OP-201ENST00000349556 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
FGFR1OP-201ENST00000349556 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
FGFR1OP-201ENST00000349556 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
FGFR1OP-201ENST00000349556 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.9
FGFR1OP-201ENST00000349556 LGALS3P17931 250 aaKnown RBP9.4□□□□□ -0.9
FGFR1OP-201ENST00000349556 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
FGFR1OP-201ENST00000349556 PHF5AQ7RTV0 110 aaKnown RBP9.4□□□□□ -0.9
FGFR1OP-201ENST00000349556 EPM2AB3EWF7 344 aa9.4□□□□□ -0.91
FGFR1OP-201ENST00000349556 E9PLD3 99 aa9.4□□□□□ -0.91
FGFR1OP-201ENST00000349556 SMIM13P0DJ93 91 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms