RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 HAMPP81172 84 aa9.06□□□□□ -0.96
TPM4-202ENST00000344824 VAMP8Q9BV40 100 aa9.06□□□□□ -0.96
TPM4-202ENST00000344824 PAM16Q9Y3D7 125 aa9.06□□□□□ -0.96
TPM4-202ENST00000344824 A0A087WZ39 114 aa9.05□□□□□ -0.96
TPM4-202ENST00000344824 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
TPM4-202ENST00000344824 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
TPM4-202ENST00000344824 TOMM7Q9P0U1 55 aa9.05□□□□□ -0.96
TPM4-202ENST00000344824 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
TPM4-202ENST00000344824 SPATA45Q537H7 98 aa9.04□□□□□ -0.96
TPM4-202ENST00000344824 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
TPM4-202ENST00000344824 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
TPM4-202ENST00000344824 NMUP48645 174 aa9.03□□□□□ -0.96
TPM4-202ENST00000344824 S100A12P80511 92 aa9.03□□□□□ -0.96
TPM4-202ENST00000344824 C12orf57Q99622 126 aa9.03□□□□□ -0.96
TPM4-202ENST00000344824 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
TPM4-202ENST00000344824 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
TPM4-202ENST00000344824 APOMO95445 188 aa9.02□□□□□ -0.97
TPM4-202ENST00000344824 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
TPM4-202ENST00000344824 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
TPM4-202ENST00000344824 E9PLD3 99 aa9.01□□□□□ -0.97
TPM4-202ENST00000344824 LEPROTO15243 131 aa9.01□□□□□ -0.97
TPM4-202ENST00000344824 TSPEAR-AS2P59090 65 aa9.01□□□□□ -0.97
TPM4-202ENST00000344824 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
TPM4-202ENST00000344824 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
TPM4-202ENST00000344824 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
TPM4-202ENST00000344824 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
TPM4-202ENST00000344824 PRSS2P07478 247 aa9□□□□□ -0.97
TPM4-202ENST00000344824 XGP55808 180 aa9□□□□□ -0.97
TPM4-202ENST00000344824 SPAG11BQ08648 103 aa9□□□□□ -0.97
TPM4-202ENST00000344824 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
TPM4-202ENST00000344824 Q8N1X5 172 aa9□□□□□ -0.97
TPM4-202ENST00000344824 C15orf56Q8N910 161 aa9□□□□□ -0.97
TPM4-202ENST00000344824 COX7B2Q8TF08 81 aa9□□□□□ -0.97
TPM4-202ENST00000344824 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
TPM4-202ENST00000344824 KRTAP17-1Q9BYP8 105 aa9□□□□□ -0.97
TPM4-202ENST00000344824 TTTY13Q9BZ97 58 aa9□□□□□ -0.97
TPM4-202ENST00000344824 J3QQQ9 107 aa8.99□□□□□ -0.97
TPM4-202ENST00000344824 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
TPM4-202ENST00000344824 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
TPM4-202ENST00000344824 LINC00518Q8N0U6 118 aa8.99□□□□□ -0.97
TPM4-202ENST00000344824 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
TPM4-202ENST00000344824 C6orf226Q5I0X4 101 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 PCP2Q8IVA1 136 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 C14orf144Q96I85 54 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 FAM30AQ9NZY2 134 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 TP73-AS1Q9UF72 201 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 ZNF561-AS1K7EIQ3 104 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 Q8IZM0 81 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
TPM4-202ENST00000344824 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
TPM4-202ENST00000344824 EPM2AB3EWF7 344 aa8.96□□□□□ -0.98
TPM4-202ENST00000344824 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
TPM4-202ENST00000344824 C2orf82Q6UX34 121 aa8.96□□□□□ -0.98
TPM4-202ENST00000344824 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
TPM4-202ENST00000344824 FAT1Q14517 4588 aa8.95□□□□□ -0.98
TPM4-202ENST00000344824 CKS1BP61024 79 aa8.95□□□□□ -0.98
TPM4-202ENST00000344824 Q5VSD8 79 aa8.95□□□□□ -0.98
TPM4-202ENST00000344824 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
TPM4-202ENST00000344824 GVQW2A0A096LPI5 108 aaPredicted RBP8.94□□□□□ -0.98
TPM4-202ENST00000344824 COX8AP10176 69 aa8.94□□□□□ -0.98
TPM4-202ENST00000344824 MYMXA0A1B0GTQ4 84 aa8.93□□□□□ -0.98
TPM4-202ENST00000344824 CAMK2N2Q96S95 79 aa8.93□□□□□ -0.98
TPM4-202ENST00000344824 NDUFA1O15239 70 aa8.92□□□□□ -0.98
TPM4-202ENST00000344824 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
TPM4-202ENST00000344824 CXCL5P42830 114 aa8.91□□□□□ -0.98
TPM4-202ENST00000344824 C10orf25Q5T742 122 aa8.91□□□□□ -0.98
TPM4-202ENST00000344824 SLC25A34Q6PIV7 304 aa8.91□□□□□ -0.98
TPM4-202ENST00000344824 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
TPM4-202ENST00000344824 SCGB1D4Q6XE38 83 aa8.9□□□□□ -0.98
TPM4-202ENST00000344824 Q6ZRU5 148 aa8.9□□□□□ -0.98
TPM4-202ENST00000344824 Q6ZSA8 131 aa8.9□□□□□ -0.98
TPM4-202ENST00000344824 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
TPM4-202ENST00000344824 A0A0U1RRA0 63 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 MEIG1Q5JSS6 88 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 BOD1L2Q8IYS8 172 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 C2orf48Q96LS8 159 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
TPM4-202ENST00000344824 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.88□□□□□ -0.99
TPM4-202ENST00000344824 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 SLPIP03973 132 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
TPM4-202ENST00000344824 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 TSTD3H0UI37 97 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 PFN2P35080 140 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 HERV-K104P63124 156 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 C6orf48Q9UBA6 75 aa8.88□□□□□ -0.99
TPM4-202ENST00000344824 SFTA2Q6UW10 78 aa8.87□□□□□ -0.99
TPM4-202ENST00000344824 DLEU1O43261 78 aa8.86□□□□□ -0.99
TPM4-202ENST00000344824 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
TPM4-202ENST00000344824 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
TPM4-202ENST00000344824 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
TPM4-202ENST00000344824 MIEN1Q9BRT3 115 aa8.86□□□□□ -0.99
TPM4-202ENST00000344824 ERG28Q9UKR5 140 aa8.86□□□□□ -0.99
TPM4-202ENST00000344824 F8WDY8 70 aa8.85□□□□□ -0.99
TPM4-202ENST00000344824 INAFM2P0DMQ5 153 aa8.85□□□□□ -0.99
TPM4-202ENST00000344824 LINC00158P58513 81 aa8.85□□□□□ -0.99
TPM4-202ENST00000344824 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms