RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 LINC00846Q9NV44 126 aa5.79□□□□□ -1.48
UBE4B-202ENST00000343090 TRAV7A0A075B6U4 112 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 KPRPQ5T749 579 aaPredicted RBP5.78□□□□□ -1.48
UBE4B-202ENST00000343090 C7orf33Q8WU49 177 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 SPTBN4Q9H254 2564 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 FAM19A1Q7Z5A9 133 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 LRCOL1A6NCL2 159 aa5.78□□□□□ -1.48
UBE4B-202ENST00000343090 OXLD1Q5BKU9 147 aa5.77□□□□□ -1.49
UBE4B-202ENST00000343090 A0A087WZ39 114 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 RPL37AP8A6NKH3 93 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 UNQ6190/PRO20217Q6UXQ8 127 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 LELP1Q5T871 98 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.76□□□□□ -1.49
UBE4B-202ENST00000343090 AMELXQ99217 191 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 FN1P02751 2386 aaKnown RBP5.76□□□□□ -1.49
UBE4B-202ENST00000343090 RPL28P46779 137 aaKnown RBP5.76□□□□□ -1.49
UBE4B-202ENST00000343090 CYSRT1A8MQ03 144 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 RETNQ9HD89 108 aa5.76□□□□□ -1.49
UBE4B-202ENST00000343090 COL4A2P08572 1712 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 NANOS2P60321 138 aaKnown RBP5.75□□□□□ -1.49
UBE4B-202ENST00000343090 Q8IZM0 81 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 IGHV4-30-4P0DP06 118 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 FHL2Q14192 279 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 KIF25-AS1Q9Y6Z4 181 aa5.75□□□□□ -1.49
UBE4B-202ENST00000343090 IGLV1-51P01701 117 aa5.74□□□□□ -1.49
UBE4B-202ENST00000343090 ZFYVE26Q68DK2 2539 aa5.74□□□□□ -1.49
UBE4B-202ENST00000343090 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
UBE4B-202ENST00000343090 TRBV7-6A0A0J9YX20 115 aa5.74□□□□□ -1.49
UBE4B-202ENST00000343090 WFDC10BQ8IUB3 73 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 POLQO75417 2590 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 ZNF73O43830 326 aaPredicted RBP5.73□□□□□ -1.49
UBE4B-202ENST00000343090 BRI3O95415 125 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 ZNF706Q9Y5V0 76 aaPredicted RBP5.73□□□□□ -1.49
UBE4B-202ENST00000343090 CHD7Q9P2D1 2997 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 PCSK5Q92824 1860 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 A0A0J9YWU9 116 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 M0R378 163 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 Q8N2B8 174 aa5.73□□□□□ -1.49
UBE4B-202ENST00000343090 PTPRBP23467 1997 aa5.72□□□□□ -1.49
UBE4B-202ENST00000343090 BEAN1Q3B7T3 259 aa5.72□□□□□ -1.49
UBE4B-202ENST00000343090 C6orf223Q8N319 242 aa5.72□□□□□ -1.49
UBE4B-202ENST00000343090 COX17Q14061 63 aa5.71□□□□□ -1.49
UBE4B-202ENST00000343090 FAM19A3Q7Z5A8 133 aa5.71□□□□□ -1.49
UBE4B-202ENST00000343090 DOPEY1Q5JWR5 2465 aa5.71□□□□□ -1.49
UBE4B-202ENST00000343090 LINC00315P59091 139 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 TRAV10A0A0B4J240 114 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 M0R2N4 97 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 PRR4Q16378 134 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 FAM218AQ96MZ4 157 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 Q9UF83 564 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 PKD1L2Q7Z442 2459 aa5.71□□□□□ -1.5
UBE4B-202ENST00000343090 Q8N814 137 aa5.7□□□□□ -1.5
UBE4B-202ENST00000343090 A8MTW9 85 aa5.7□□□□□ -1.5
UBE4B-202ENST00000343090 WFDC13Q8IUB5 93 aa5.7□□□□□ -1.5
UBE4B-202ENST00000343090 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 Q8N3U1 123 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 MTORP42345 2549 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 ZNF462Q96JM2 2506 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 LINC00337Q8N6G1 96 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 C11orf72Q8NBR9 251 aa5.69□□□□□ -1.5
UBE4B-202ENST00000343090 Q6ZTC4 211 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 PRYO14603 147 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 HTTP42858 3142 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 LRRK2Q5S007 2527 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 A0A0C4DFX4 3053 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 FAM30AQ9NZY2 134 aa5.68□□□□□ -1.5
UBE4B-202ENST00000343090 LITAFQ99732 161 aa5.67□□□□□ -1.5
UBE4B-202ENST00000343090 PSPHP1O15172 72 aa5.67□□□□□ -1.5
UBE4B-202ENST00000343090 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.67□□□□□ -1.5
UBE4B-202ENST00000343090 DHRS4-AS1Q9P1J3 65 aa5.67□□□□□ -1.5
UBE4B-202ENST00000343090 CELA1Q9UNI1 258 aa5.67□□□□□ -1.5
UBE4B-202ENST00000343090 COL27A1Q8IZC6 1860 aaPredicted RBP5.67□□□□□ -1.5
UBE4B-202ENST00000343090 TMEM254Q8TBM7 123 aa5.66□□□□□ -1.5
UBE4B-202ENST00000343090 LINC01547P58512 204 aaPredicted RBP5.66□□□□□ -1.5
UBE4B-202ENST00000343090 C16orf95Q9H693 158 aa5.66□□□□□ -1.5
UBE4B-202ENST00000343090 SPINK6Q6UWN8 80 aa5.65□□□□□ -1.5
UBE4B-202ENST00000343090 LINC00336Q6ZUF6 198 aa5.65□□□□□ -1.5
UBE4B-202ENST00000343090 LINC00474Q9P2X8 69 aa5.65□□□□□ -1.5
UBE4B-202ENST00000343090 Q6ZVQ6 151 aa5.65□□□□□ -1.5
UBE4B-202ENST00000343090 RANBP2P49792 3224 aaKnown RBP5.65□□□□□ -1.5
UBE4B-202ENST00000343090 EGFEM1PQ0D2K5 195 aa5.65□□□□□ -1.51
UBE4B-202ENST00000343090 LY6G6CO95867 125 aa5.65□□□□□ -1.51
UBE4B-202ENST00000343090 MKI67P46013 3256 aaKnown RBP5.65□□□□□ -1.51
UBE4B-202ENST00000343090 IGLV9-49A0A0B4J1Y8 123 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 ESRGQ1W209 222 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 EIF4EBP3O60516 100 aaPredicted RBP5.64□□□□□ -1.51
UBE4B-202ENST00000343090 BRCA2P51587 3418 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 A6NED7 52 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 WIPF1O43516 503 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 LINC01561Q8N1V8 128 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 Q8N9L7 120 aa5.64□□□□□ -1.51
UBE4B-202ENST00000343090 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
UBE4B-202ENST00000343090 A0A1B0GUV1 79 aa5.63□□□□□ -1.51
UBE4B-202ENST00000343090 ACANP16112 2415 aa5.63□□□□□ -1.51
UBE4B-202ENST00000343090 PLAC8L1A1L4L8 177 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms