RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 A0A087WYN8 130 aa10.1□□□□□ -0.79
PDE4D-203ENST00000340635 FBXL19-AS1Q494R0 122 aa10.1□□□□□ -0.79
PDE4D-203ENST00000340635 COL4A4P53420 1690 aaPredicted RBP10.09□□□□□ -0.79
PDE4D-203ENST00000340635 ANKHD1Q8IWZ3 2542 aaKnown RBP10.09□□□□□ -0.79
PDE4D-203ENST00000340635 CXCL6P80162 114 aa10.09□□□□□ -0.79
PDE4D-203ENST00000340635 TMEM254Q8TBM7 123 aa10.08□□□□□ -0.8
PDE4D-203ENST00000340635 Q9UF83 564 aa10.08□□□□□ -0.8
PDE4D-203ENST00000340635 HIVEP3Q5T1R4 2406 aa10.07□□□□□ -0.8
PDE4D-203ENST00000340635 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
PDE4D-203ENST00000340635 C10orf99Q6UWK7 81 aa10.06□□□□□ -0.8
PDE4D-203ENST00000340635 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
PDE4D-203ENST00000340635 Q6ZTC4 211 aa10.06□□□□□ -0.8
PDE4D-203ENST00000340635 C1orf134Q5TEV5 83 aa10.06□□□□□ -0.8
PDE4D-203ENST00000340635 CACNA1AO00555 2505 aa10.05□□□□□ -0.8
PDE4D-203ENST00000340635 PRM2P04554 102 aa10.05□□□□□ -0.8
PDE4D-203ENST00000340635 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
PDE4D-203ENST00000340635 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
PDE4D-203ENST00000340635 EIF4EBP1Q13541 118 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-203ENST00000340635 Q8N6K4 173 aa10.05□□□□□ -0.8
PDE4D-203ENST00000340635 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
PDE4D-203ENST00000340635 ATP11AUNQ6ZP68 121 aa10.03□□□□□ -0.8
PDE4D-203ENST00000340635 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
PDE4D-203ENST00000340635 FSTL3O95633 263 aa10.02□□□□□ -0.8
PDE4D-203ENST00000340635 C6orf48Q9UBA6 75 aa10.02□□□□□ -0.8
PDE4D-203ENST00000340635 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
PDE4D-203ENST00000340635 C19orf84I3L1E1 186 aa10.02□□□□□ -0.81
PDE4D-203ENST00000340635 COX6A2Q02221 97 aa10.02□□□□□ -0.81
PDE4D-203ENST00000340635 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
PDE4D-203ENST00000340635 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
PDE4D-203ENST00000340635 F8WDY8 70 aa10.01□□□□□ -0.81
PDE4D-203ENST00000340635 PRORYQ9H606 182 aa10.01□□□□□ -0.81
PDE4D-203ENST00000340635 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
PDE4D-203ENST00000340635 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
PDE4D-203ENST00000340635 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
PDE4D-203ENST00000340635 KLLNB2CW77 178 aa10□□□□□ -0.81
PDE4D-203ENST00000340635 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
PDE4D-203ENST00000340635 PIEZO2Q9H5I5 2752 aa10□□□□□ -0.81
PDE4D-203ENST00000340635 TP53AIP1Q9HCN2 124 aa10□□□□□ -0.81
PDE4D-203ENST00000340635 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
PDE4D-203ENST00000340635 PRR9Q5T870 116 aa9.98□□□□□ -0.81
PDE4D-203ENST00000340635 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
PDE4D-203ENST00000340635 Q8NA96 180 aa9.98□□□□□ -0.81
PDE4D-203ENST00000340635 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
PDE4D-203ENST00000340635 NOTCH2Q04721 2471 aa9.97□□□□□ -0.81
PDE4D-203ENST00000340635 BRI3O95415 125 aa9.96□□□□□ -0.82
PDE4D-203ENST00000340635 EP400Q96L91 3159 aa9.95□□□□□ -0.82
PDE4D-203ENST00000340635 IGIPA6NJ69 53 aa9.95□□□□□ -0.82
PDE4D-203ENST00000340635 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
PDE4D-203ENST00000340635 PLA2G5P39877 138 aa9.95□□□□□ -0.82
PDE4D-203ENST00000340635 Q8N2B8 174 aa9.95□□□□□ -0.82
PDE4D-203ENST00000340635 ZNF295-AS1Q8N0V1 137 aa9.94□□□□□ -0.82
PDE4D-203ENST00000340635 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
PDE4D-203ENST00000340635 BRWD1-AS2P59051 145 aa9.93□□□□□ -0.82
PDE4D-203ENST00000340635 FN1P02751 2386 aaKnown RBP9.92□□□□□ -0.82
PDE4D-203ENST00000340635 MOBPQ13875 183 aa9.92□□□□□ -0.82
PDE4D-203ENST00000340635 IGLV4-60A0A075B6I1 120 aa9.92□□□□□ -0.82
PDE4D-203ENST00000340635 A8MTW9 85 aa9.91□□□□□ -0.82
PDE4D-203ENST00000340635 SMCR5Q8TEV8 140 aa9.91□□□□□ -0.82
PDE4D-203ENST00000340635 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.82
PDE4D-203ENST00000340635 C1orf229Q6ZS94 237 aaPredicted RBP9.9□□□□□ -0.82
PDE4D-203ENST00000340635 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
PDE4D-203ENST00000340635 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
PDE4D-203ENST00000340635 LINC00313P59037 77 aa9.89□□□□□ -0.83
PDE4D-203ENST00000340635 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
PDE4D-203ENST00000340635 IGLV1-40P01703 118 aa9.88□□□□□ -0.83
PDE4D-203ENST00000340635 RPS28P62857 69 aaKnown RBP9.87□□□□□ -0.83
PDE4D-203ENST00000340635 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
PDE4D-203ENST00000340635 MYO9AB2RTY4 2548 aa9.87□□□□□ -0.83
PDE4D-203ENST00000340635 FHL2Q14192 279 aa9.87□□□□□ -0.83
PDE4D-203ENST00000340635 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
PDE4D-203ENST00000340635 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
PDE4D-203ENST00000340635 C11orf71Q6IPW1 123 aa9.85□□□□□ -0.83
PDE4D-203ENST00000340635 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
PDE4D-203ENST00000340635 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
PDE4D-203ENST00000340635 CENPFP49454 3210 aa9.85□□□□□ -0.83
PDE4D-203ENST00000340635 TRAV22A0A0B4J277 110 aa9.85□□□□□ -0.83
PDE4D-203ENST00000340635 BCE1O60756 84 aa9.84□□□□□ -0.83
PDE4D-203ENST00000340635 Q6ZRU5 148 aa9.84□□□□□ -0.83
PDE4D-203ENST00000340635 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 COL27A1Q8IZC6 1860 aaPredicted RBP9.83□□□□□ -0.84
PDE4D-203ENST00000340635 A0A1B0GUV1 79 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 WISP2O76076 250 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 EDN2P20800 178 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 TSPEAR-AS2P59090 65 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 TLN2Q9Y4G6 2542 aa9.83□□□□□ -0.84
PDE4D-203ENST00000340635 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
PDE4D-203ENST00000340635 Q6ZPA2 131 aa9.82□□□□□ -0.84
PDE4D-203ENST00000340635 A0A1W2PNU3 283 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-203ENST00000340635 COX6B2Q6YFQ2 88 aa9.82□□□□□ -0.84
PDE4D-203ENST00000340635 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
PDE4D-203ENST00000340635 ANKRD17O75179 2603 aaKnown RBP9.8□□□□□ -0.84
PDE4D-203ENST00000340635 ODF3L2Q3SX64 289 aa9.8□□□□□ -0.84
PDE4D-203ENST00000340635 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
PDE4D-203ENST00000340635 AMELXQ99217 191 aa9.8□□□□□ -0.84
PDE4D-203ENST00000340635 NHLRC4P0CG21 123 aaPredicted RBP9.8□□□□□ -0.84
PDE4D-203ENST00000340635 Q96NJ1 140 aa9.8□□□□□ -0.84
PDE4D-203ENST00000340635 SMR3AQ99954 134 aa9.79□□□□□ -0.84
PDE4D-203ENST00000340635 H3BPC8 53 aa9.79□□□□□ -0.84
PDE4D-203ENST00000340635 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
PDE4D-203ENST00000340635 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms