RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PKIGQ9Y2B9 76 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 A0A087WYN8 130 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 XCL1P47992 114 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 XCL2Q9UBD3 114 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 F6UB75 175 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 C10orf99Q6UWK7 81 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 C1orf43Q9BWL3 253 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 S100A4P26447 101 aaKnown RBP3.98□□□□□ -1.77
CSDE1-202ENST00000339438 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 Q9UF83 564 aa3.98□□□□□ -1.77
CSDE1-202ENST00000339438 IGKV2-28A0A075B6P5 120 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 IGKV2D-28P01615 120 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 CHCHD7Q9BUK0 85 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 LINC00474Q9P2X8 69 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 COX6A2Q02221 97 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
CSDE1-202ENST00000339438 MINOS1Q5TGZ0 78 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 Q8N9W7 124 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 MINOS1-NBL1R4GNA1 71 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 IGHV3-16A0A0C4DH30 117 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 DSCR9P59020 149 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 LINC00482Q8N8I6 264 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
CSDE1-202ENST00000339438 HERC2O95714 4834 aa3.96□□□□□ -1.77
CSDE1-202ENST00000339438 A0A1W2PRX2 142 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 CLEC19AQ6UXS0 136 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 FAM19A3Q7Z5A8 133 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 FAM19A1Q7Z5A9 133 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 LINC00337Q8N6G1 96 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 WFDC9Q8NEX5 89 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-202ENST00000339438 GHRHP01286 108 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 TMEM243Q9BU79 118 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 TGP01266 2768 aa3.96□□□□□ -1.78
CSDE1-202ENST00000339438 UNQ9165/PRO28630Q6UXU0 137 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 FAM229BQ4G0N7 80 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 C20orf197Q8N268 126 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 CD28P10747 220 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-202ENST00000339438 KRTAP24-1Q3LI83 254 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 MOB4Q9Y3A3 225 aa3.95□□□□□ -1.78
CSDE1-202ENST00000339438 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 CCKP06307 115 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 CIRBPQ14011 172 aaKnown RBP3.94□□□□□ -1.78
CSDE1-202ENST00000339438 TRAV23DV6A0A075B6W5 121 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 NCR3O14931 201 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 C5orf56Q8N8D9 126 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 C11orf72Q8NBR9 251 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 LINC00167Q96N53 147 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 PROK1P58294 105 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 OXLD1Q5BKU9 147 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 FAM74A4Q5TZK3 123 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 Q6YL49 198 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 V9GYY9 64 aa3.94□□□□□ -1.78
CSDE1-202ENST00000339438 TRBV10-3A0A0K0K1G6 114 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 F5H697 171 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 DNAL4O96015 105 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 DEFB136Q30KP8 78 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 Q9H8V8 135 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 NBEAL1Q6ZS30 2694 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 IGHV3OR16-12A0A075B7B8 117 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 BCE1O60756 84 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 LINC00242Q5T6M2 205 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 Q6ZSN1 163 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 SMIM11BQ8TCY0 68 aa3.93□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1BA6NDE4 496 aaKnown RBP3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1EA6NEQ0 496 aaKnown RBP3.92□□□□□ -1.78
CSDE1-202ENST00000339438 INAFM1C9JVW0 142 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1DP0C7P1 496 aaKnown RBP3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1A1P0DJD3 496 aaKnown RBP3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RBMY1FQ15415 496 aaKnown RBP3.92□□□□□ -1.78
CSDE1-202ENST00000339438 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 MIR7-3HGQ8N6C7 128 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 LINC00467Q9BRT7 94 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 TNXBP22105 4242 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 IBA57-AS1B1ANH7 110 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 PF4P02776 101 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 ATP5EP2Q5VTU8 51 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 ENHOQ6UWT2 76 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 RMI2Q96E14 147 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 TRBV7-4A0A0J9YYF1 115 aa3.92□□□□□ -1.78
CSDE1-202ENST00000339438 STAB1Q9NY15 2570 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 TRAV7A0A075B6U4 112 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 TRAV10A0A0B4J240 114 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 A6NDX4 124 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 C18orf65Q6ZTR6 163 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
CSDE1-202ENST00000339438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms