RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SPAG11BQ08648 103 aa9.8□□□□□ -0.84
CDK5RAP3-201ENST00000338399 HSD52Q0P140 79 aa9.8□□□□□ -0.84
CDK5RAP3-201ENST00000338399 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
CDK5RAP3-201ENST00000338399 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
CDK5RAP3-201ENST00000338399 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
CDK5RAP3-201ENST00000338399 HERV-K104P63124 156 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 OCIAD2Q56VL3 154 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 TTC32Q5I0X7 151 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 C3orf84H3BNL1 204 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 CKS1BP61024 79 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 SRSF9Q13242 221 aaKnown RBP eCLIP9.79□□□□□ -0.842e-12■■□□□ 12.4
CDK5RAP3-201ENST00000338399 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
CDK5RAP3-201ENST00000338399 RNF151Q2KHN1 245 aa9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 HIGD2BQ4VC39 106 aa9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 C15orf56Q8N910 161 aa9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 LITAFQ99732 161 aa9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 SPANXB1Q9NS25 103 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-201ENST00000338399 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
CDK5RAP3-201ENST00000338399 TMEM238C9JI98 176 aa9.77□□□□□ -0.85
CDK5RAP3-201ENST00000338399 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
CDK5RAP3-201ENST00000338399 M0R2N4 97 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 GCSHP23434 173 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 CXCL5P42830 114 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 TAL2Q16559 108 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 ZNF561-AS1K7EIQ3 104 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 CIRBPQ14011 172 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 SFTA2Q6UW10 78 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 CEND1Q8N111 149 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
CDK5RAP3-201ENST00000338399 TIMM17BO60830 172 aa9.75□□□□□ -0.85
CDK5RAP3-201ENST00000338399 LY6G6CO95867 125 aa9.75□□□□□ -0.85
CDK5RAP3-201ENST00000338399 SMIM13P0DJ93 91 aa9.75□□□□□ -0.85
CDK5RAP3-201ENST00000338399 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-201ENST00000338399 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
CDK5RAP3-201ENST00000338399 DAND5Q8N907 189 aa9.74□□□□□ -0.85
CDK5RAP3-201ENST00000338399 FXYD2P54710 66 aa9.74□□□□□ -0.85
CDK5RAP3-201ENST00000338399 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
CDK5RAP3-201ENST00000338399 USP17L23D6RBM5 183 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 PSCAO43653 123 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 PFN2P35080 140 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 VPS25Q9BRG1 176 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 DNAH10Q8IVF4 4471 aa9.73□□□□□ -0.85
CDK5RAP3-201ENST00000338399 GVQW2A0A096LPI5 108 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 LECT2O14960 151 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 NPC2P61916 151 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 ERG28Q9UKR5 140 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 K7ERU9 68 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 LINC00158P58513 81 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 C9orf116Q5BN46 136 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 MUSTN1Q8IVN3 82 aa9.72□□□□□ -0.85
CDK5RAP3-201ENST00000338399 KMT2AQ03164 3969 aa9.71□□□□□ -0.85
CDK5RAP3-201ENST00000338399 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.85
CDK5RAP3-201ENST00000338399 C2orf48Q96LS8 159 aa9.7□□□□□ -0.86
CDK5RAP3-201ENST00000338399 Q6ZR54 194 aa9.7□□□□□ -0.86
CDK5RAP3-201ENST00000338399 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
CDK5RAP3-201ENST00000338399 A6NDN8 102 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 C9orf118A6NHY6 69 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 WFDC2Q14508 124 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 Q6ZRU5 148 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 C6orf48Q9UBA6 75 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
CDK5RAP3-201ENST00000338399 EIF4EBP3O60516 100 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-201ENST00000338399 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
CDK5RAP3-201ENST00000338399 GTF2H5Q6ZYL4 71 aa9.68□□□□□ -0.86
CDK5RAP3-201ENST00000338399 LINC00308Q8TCZ7 52 aa9.68□□□□□ -0.86
CDK5RAP3-201ENST00000338399 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
CDK5RAP3-201ENST00000338399 K7EP34 96 aa9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 IFITM1P13164 125 aa9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 RPL24P83731 157 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 COX17Q14061 63 aa9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 SOSTDC1Q6X4U4 206 aa9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 DNAH6Q9C0G6 4158 aa9.67□□□□□ -0.86
CDK5RAP3-201ENST00000338399 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 A4D1N5 150 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 F8WDY8 70 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 TMEM238LA0A1B0GVL6 79 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 A6NJY4 79 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 SLPIP03973 132 aa9.66□□□□□ -0.86
CDK5RAP3-201ENST00000338399 K7ERJ3 54 aa9.64□□□□□ -0.87
CDK5RAP3-201ENST00000338399 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
CDK5RAP3-201ENST00000338399 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
CDK5RAP3-201ENST00000338399 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
CDK5RAP3-201ENST00000338399 H3BUT2 72 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 CFC1BP0CG36 223 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 CFC1P0CG37 223 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 RAB37Q96AX2 223 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
CDK5RAP3-201ENST00000338399 A0A1W2PPM0 123 aa9.61□□□□□ -0.87
CDK5RAP3-201ENST00000338399 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
CDK5RAP3-201ENST00000338399 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
CDK5RAP3-201ENST00000338399 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
CDK5RAP3-201ENST00000338399 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms