RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 FAM236AA0A1B0GUQ0 79 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 FAM236BA0A1B0GV22 79 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 C14orf132Q9NPU4 83 aa4.44□□□□□ -1.7
PRKDC-202ENST00000338368 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
PRKDC-202ENST00000338368 SLPIP03973 132 aa4.43□□□□□ -1.7
PRKDC-202ENST00000338368 A0A0J9YWU9 116 aa4.43□□□□□ -1.7
PRKDC-202ENST00000338368 MP68P56378 58 aa4.43□□□□□ -1.7
PRKDC-202ENST00000338368 A0A1B0GUV1 79 aa4.43□□□□□ -1.7
PRKDC-202ENST00000338368 UNQ6190/PRO20217Q6UXQ8 127 aa4.43□□□□□ -1.7
PRKDC-202ENST00000338368 SYCNQ0VAF6 134 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 VCANP13611 3396 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 MAST4O15021 2626 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 CYSRT1A8MQ03 144 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 ZNF575Q86XF7 245 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 RBM3P98179 157 aaKnown RBP4.42□□□□□ -1.7
PRKDC-202ENST00000338368 C3orf22Q8N5N4 141 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 X6R8D5 127 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 KRTAP1-3Q8IUG1 177 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 IGKV2-24A0A0C4DH68 120 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 COX7BP24311 80 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 MT-ATP8P03928 68 aa4.42□□□□□ -1.7
PRKDC-202ENST00000338368 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
PRKDC-202ENST00000338368 IGLV5-39A0A0G2JS06 123 aa4.41□□□□□ -1.7
PRKDC-202ENST00000338368 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
PRKDC-202ENST00000338368 K7ERS5 55 aa4.41□□□□□ -1.7
PRKDC-202ENST00000338368 LYPD5Q6UWN5 251 aa4.41□□□□□ -1.7
PRKDC-202ENST00000338368 IGLV5-45A0A087WSX0 123 aa4.4□□□□□ -1.7
PRKDC-202ENST00000338368 RPL28P46779 137 aaKnown RBP4.4□□□□□ -1.7
PRKDC-202ENST00000338368 SPTSSBQ8NFR3 76 aa4.4□□□□□ -1.7
PRKDC-202ENST00000338368 HECTD1Q9ULT8 2610 aa4.4□□□□□ -1.71
PRKDC-202ENST00000338368 C9orf116Q5BN46 136 aaPredicted RBP4.4□□□□□ -1.71
PRKDC-202ENST00000338368 CENPEQ02224 2701 aa4.4□□□□□ -1.71
PRKDC-202ENST00000338368 CELA1Q9UNI1 258 aa4.4□□□□□ -1.71
PRKDC-202ENST00000338368 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
PRKDC-202ENST00000338368 WFDC9Q8NEX5 89 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 Q6ZQY7 126 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 A0A1B0GX51 115 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 M0R378 163 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 EGFEM1PQ0D2K5 195 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 WFDC10BQ8IUB3 73 aa4.39□□□□□ -1.71
PRKDC-202ENST00000338368 CR1P17927 2039 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 IGKV2-28A0A075B6P5 120 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 IGKV2D-28P01615 120 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 TRAV23DV6A0A075B6W5 121 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 XGP55808 180 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 NREPQ16612 68 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 KRTAP10-3P60369 221 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 HIGD2AQ9BW72 106 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 ATRQ13535 2644 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
PRKDC-202ENST00000338368 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
PRKDC-202ENST00000338368 DHRS4-AS1Q9P1J3 65 aa4.37□□□□□ -1.71
PRKDC-202ENST00000338368 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-202ENST00000338368 CSNK1G2-AS1Q8NCQ2 148 aa4.37□□□□□ -1.71
PRKDC-202ENST00000338368 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-202ENST00000338368 FLNAP21333 2647 aaKnown RBP4.37□□□□□ -1.71
PRKDC-202ENST00000338368 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 GIG44P09565 113 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-202ENST00000338368 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 NDUFS5O43920 106 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 SMCPP49901 116 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-202ENST00000338368 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
PRKDC-202ENST00000338368 SOSTDC1Q6X4U4 206 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 PLAC8L1A1L4L8 177 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
PRKDC-202ENST00000338368 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 SPATA3Q8NHX4 192 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 Q8NAQ8 132 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 A0A087WYN8 130 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 LITAFQ99732 161 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 LIMD2Q9BT23 127 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 ESRGQ1W209 222 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
PRKDC-202ENST00000338368 Q6ZRU5 148 aa4.34□□□□□ -1.71
PRKDC-202ENST00000338368 H3BNG1 76 aa4.34□□□□□ -1.71
PRKDC-202ENST00000338368 FAM19A1Q7Z5A9 133 aa4.34□□□□□ -1.71
PRKDC-202ENST00000338368 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.72
PRKDC-202ENST00000338368 FAM236CP0DP71 79 aa4.34□□□□□ -1.72
PRKDC-202ENST00000338368 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.72
PRKDC-202ENST00000338368 COX7CP15954 63 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 LAMA2P24043 3122 aaKnown RBP4.33□□□□□ -1.72
PRKDC-202ENST00000338368 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
PRKDC-202ENST00000338368 Q8N3U1 123 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
PRKDC-202ENST00000338368 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 TRANK1O15050 2925 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
PRKDC-202ENST00000338368 ITPR2Q14571 2701 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 RPL37AP8A6NKH3 93 aa4.32□□□□□ -1.72
PRKDC-202ENST00000338368 CCKP06307 115 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms