RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
RAB28-203ENST00000338176 C18orf32Q8TCD1 76 aa12.94□□□□□ -0.34
RAB28-203ENST00000338176 PACRGQ96M98 296 aaPredicted RBP12.94□□□□□ -0.34
RAB28-203ENST00000338176 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
RAB28-203ENST00000338176 A0A096LNJ9 63 aa12.93□□□□□ -0.34
RAB28-203ENST00000338176 NDUFA5Q16718 116 aa12.93□□□□□ -0.34
RAB28-203ENST00000338176 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
RAB28-203ENST00000338176 SEC11AP67812 179 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 C6orf226Q5I0X4 101 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 KRTAP11-1Q8IUC1 163 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 PSORS1C2Q9UIG4 136 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 Q8IZM0 81 aa12.92□□□□□ -0.34
RAB28-203ENST00000338176 CKS1BP61024 79 aa12.91□□□□□ -0.34
RAB28-203ENST00000338176 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
RAB28-203ENST00000338176 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
RAB28-203ENST00000338176 SMIM1B2RUZ4 78 aa12.9□□□□□ -0.34
RAB28-203ENST00000338176 NDUFC2-KCTD14E9PQ53 114 aa12.9□□□□□ -0.34
RAB28-203ENST00000338176 SRSF9Q13242 221 aaKnown RBP eCLIP12.9□□□□□ -0.34
RAB28-203ENST00000338176 YPEL4Q96NS1 127 aa12.9□□□□□ -0.34
RAB28-203ENST00000338176 LINC00614P0C842 121 aa12.89□□□□□ -0.35
RAB28-203ENST00000338176 PMVKQ15126 192 aa12.89□□□□□ -0.35
RAB28-203ENST00000338176 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
RAB28-203ENST00000338176 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
RAB28-203ENST00000338176 SPINK8P0C7L1 97 aa12.87□□□□□ -0.35
RAB28-203ENST00000338176 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
RAB28-203ENST00000338176 C1orf137Q5JT78 98 aa12.86□□□□□ -0.35
RAB28-203ENST00000338176 NDUFA6P56556 154 aa12.86□□□□□ -0.35
RAB28-203ENST00000338176 ODF1Q14990 250 aa12.86□□□□□ -0.35
RAB28-203ENST00000338176 F8VRH5 84 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 COX7B2Q8TF08 81 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 XAGE1AQ9HD64 81 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 M0QXV9 152 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 HBDP02042 147 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
RAB28-203ENST00000338176 SLC7A5P1Q8MH63 180 aa12.82□□□□□ -0.36
RAB28-203ENST00000338176 IGLC3P0DOY3 106 aa12.81□□□□□ -0.36
RAB28-203ENST00000338176 CXCL5P42830 114 aa12.79□□□□□ -0.36
RAB28-203ENST00000338176 REG3GQ6UW15 175 aa12.79□□□□□ -0.36
RAB28-203ENST00000338176 IGLV7-43P04211 117 aa12.78□□□□□ -0.36
RAB28-203ENST00000338176 ZNF22P17026 224 aaPredicted RBP12.78□□□□□ -0.36
RAB28-203ENST00000338176 RAB5BP61020 215 aa12.78□□□□□ -0.36
RAB28-203ENST00000338176 UBE2BP63146 152 aa12.78□□□□□ -0.36
RAB28-203ENST00000338176 BAGE3Q86Y29 109 aa12.76□□□□□ -0.37
RAB28-203ENST00000338176 H3BRM9 83 aa12.76□□□□□ -0.37
RAB28-203ENST00000338176 PLA2G2DQ9UNK4 145 aa12.76□□□□□ -0.37
RAB28-203ENST00000338176 C22orf24Q9Y442 160 aa12.76□□□□□ -0.37
RAB28-203ENST00000338176 C11orf86A6NJI1 115 aa12.75□□□□□ -0.37
RAB28-203ENST00000338176 IGLV5-39A0A0G2JS06 123 aa12.74□□□□□ -0.37
RAB28-203ENST00000338176 ATP5LO75964 103 aa12.74□□□□□ -0.37
RAB28-203ENST00000338176 KRTAP10-8P60410 259 aa12.74□□□□□ -0.37
RAB28-203ENST00000338176 TRGC2P03986 189 aa12.71□□□□□ -0.38
RAB28-203ENST00000338176 CHCHD1Q96BP2 118 aaKnown RBP12.71□□□□□ -0.38
RAB28-203ENST00000338176 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
RAB28-203ENST00000338176 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
RAB28-203ENST00000338176 CHTOPQ9Y3Y2 248 aaKnown RBP12.69□□□□□ -0.38
RAB28-203ENST00000338176 PFN2P35080 140 aa12.69□□□□□ -0.38
RAB28-203ENST00000338176 IFI27L1Q96BM0 104 aa12.69□□□□□ -0.38
RAB28-203ENST00000338176 UBR4Q5T4S7 5183 aa12.68□□□□□ -0.38
RAB28-203ENST00000338176 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
RAB28-203ENST00000338176 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
RAB28-203ENST00000338176 H0Y9J4 135 aa12.67□□□□□ -0.38
RAB28-203ENST00000338176 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
RAB28-203ENST00000338176 GAGE10A6NGK3 116 aa12.66□□□□□ -0.38
RAB28-203ENST00000338176 RPL37AP8A6NKH3 93 aa12.66□□□□□ -0.38
RAB28-203ENST00000338176 LINC00310P59036 64 aa12.66□□□□□ -0.38
RAB28-203ENST00000338176 SCO1O75880 301 aa12.65□□□□□ -0.38
RAB28-203ENST00000338176 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
RAB28-203ENST00000338176 LINC00167Q96N53 147 aa12.65□□□□□ -0.38
RAB28-203ENST00000338176 HSBP1O75506 76 aa12.64□□□□□ -0.39
RAB28-203ENST00000338176 PRR26Q8N8Z3 221 aa12.64□□□□□ -0.39
RAB28-203ENST00000338176 TP73-AS1Q9UF72 201 aa12.64□□□□□ -0.39
RAB28-203ENST00000338176 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
RAB28-203ENST00000338176 TRAV12-1A0A0B4J245 112 aa12.63□□□□□ -0.39
RAB28-203ENST00000338176 COLCA2A8K830 154 aa12.62□□□□□ -0.39
RAB28-203ENST00000338176 SERF1AO75920 110 aa12.62□□□□□ -0.39
RAB28-203ENST00000338176 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
RAB28-203ENST00000338176 NUPR1O60356 82 aa12.61□□□□□ -0.39
RAB28-203ENST00000338176 KRTAP1-4P0C5Y4 121 aa12.61□□□□□ -0.39
RAB28-203ENST00000338176 H0Y8G0 127 aa12.61□□□□□ -0.39
RAB28-203ENST00000338176 SND1-IT1Q9HBX3 110 aa12.61□□□□□ -0.39
RAB28-203ENST00000338176 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
RAB28-203ENST00000338176 Q8NDZ9 215 aa12.59□□□□□ -0.39
RAB28-203ENST00000338176 ZNF861PO60384 105 aa12.58□□□□□ -0.39
RAB28-203ENST00000338176 NKAPP1Q8N9T2 125 aa12.58□□□□□ -0.39
RAB28-203ENST00000338176 LRP2P98164 4655 aa12.57□□□□□ -0.4
RAB28-203ENST00000338176 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
RAB28-203ENST00000338176 BCE1O60756 84 aa12.56□□□□□ -0.4
RAB28-203ENST00000338176 VPREB1P12018 145 aa12.56□□□□□ -0.4
RAB28-203ENST00000338176 IGKV2-28A0A075B6P5 120 aa12.55□□□□□ -0.4
RAB28-203ENST00000338176 LEPROTL1O95214 131 aa12.55□□□□□ -0.4
RAB28-203ENST00000338176 IGKV2D-28P01615 120 aa12.55□□□□□ -0.4
RAB28-203ENST00000338176 FABP4P15090 132 aa12.54□□□□□ -0.4
RAB28-203ENST00000338176 COX17Q14061 63 aa12.54□□□□□ -0.4
RAB28-203ENST00000338176 LINC00158P58513 81 aa12.53□□□□□ -0.4
RAB28-203ENST00000338176 PMCHL2Q9BQD1 86 aa12.51□□□□□ -0.41
RAB28-203ENST00000338176 SMIM13P0DJ93 91 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms