RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 LINC00959A0A1B0GUT2 108 aa15.98■□□□□ 0.15
CLPTM1-201ENST00000337392 M0QXV9 152 aa15.97■□□□□ 0.15
CLPTM1-201ENST00000337392 LYRM9A8MSI8 78 aa15.97■□□□□ 0.15
CLPTM1-201ENST00000337392 MGAM2Q2M2H8 2515 aa15.96■□□□□ 0.15
CLPTM1-201ENST00000337392 RPL13AP40429 203 aaKnown RBP15.96■□□□□ 0.15
CLPTM1-201ENST00000337392 CLEC2BQ92478 149 aa15.96■□□□□ 0.15
CLPTM1-201ENST00000337392 LINC00269Q8N2A0 174 aa15.96■□□□□ 0.14
CLPTM1-201ENST00000337392 COX7B2Q8TF08 81 aa15.96■□□□□ 0.14
CLPTM1-201ENST00000337392 IFITM1P13164 125 aa15.95■□□□□ 0.14
CLPTM1-201ENST00000337392 ANKRD29Q8N6D5 301 aa15.95■□□□□ 0.14
CLPTM1-201ENST00000337392 DNAH3Q8TD57 4116 aa15.95■□□□□ 0.14
CLPTM1-201ENST00000337392 C9JAW5 83 aa15.95■□□□□ 0.14
CLPTM1-201ENST00000337392 H7C423 109 aa15.94■□□□□ 0.14
CLPTM1-201ENST00000337392 CIRBPQ14011 172 aaKnown RBP15.94■□□□□ 0.14
CLPTM1-201ENST00000337392 TTC32Q5I0X7 151 aa15.94■□□□□ 0.14
CLPTM1-201ENST00000337392 PFN2P35080 140 aa15.93■□□□□ 0.14
CLPTM1-201ENST00000337392 ICOSQ9Y6W8 199 aa15.93■□□□□ 0.14
CLPTM1-201ENST00000337392 C2orf82Q6UX34 121 aa15.92■□□□□ 0.14
CLPTM1-201ENST00000337392 SNCGO76070 127 aa15.91■□□□□ 0.14
CLPTM1-201ENST00000337392 PRB2P02812 416 aaPredicted RBP15.91■□□□□ 0.14
CLPTM1-201ENST00000337392 MIR7-3HGQ8N6C7 128 aa15.91■□□□□ 0.14
CLPTM1-201ENST00000337392 TIMM17BO60830 172 aa15.91■□□□□ 0.14
CLPTM1-201ENST00000337392 ATP5G1P05496 136 aa15.91■□□□□ 0.14
CLPTM1-201ENST00000337392 ANGP03950 147 aaKnown RBP15.9■□□□□ 0.14
CLPTM1-201ENST00000337392 C3orf56Q8N813 242 aa15.9■□□□□ 0.14
CLPTM1-201ENST00000337392 MIFP14174 115 aa15.89■□□□□ 0.13
CLPTM1-201ENST00000337392 A0A087WZ39 114 aa15.88■□□□□ 0.13
CLPTM1-201ENST00000337392 SPART-AS1P0CW21 52 aa15.88■□□□□ 0.13
CLPTM1-201ENST00000337392 LYRM7Q5U5X0 104 aa15.87■□□□□ 0.13
CLPTM1-201ENST00000337392 LINC00158P58513 81 aa15.87■□□□□ 0.13
CLPTM1-201ENST00000337392 LYSTQ99698 3801 aa15.86■□□□□ 0.13
CLPTM1-201ENST00000337392 SLC25A20O43772 301 aa15.86■□□□□ 0.13
CLPTM1-201ENST00000337392 LINC00526Q96FQ7 95 aa15.85■□□□□ 0.13
CLPTM1-201ENST00000337392 TRBV30A0A0K0K1B3 111 aa15.84■□□□□ 0.13
CLPTM1-201ENST00000337392 WIPF1O43516 503 aa15.84■□□□□ 0.13
CLPTM1-201ENST00000337392 A0A1B0GUV1 79 aa15.83■□□□□ 0.13
CLPTM1-201ENST00000337392 C6orf226Q5I0X4 101 aa15.83■□□□□ 0.13
CLPTM1-201ENST00000337392 Q6Q795 121 aa15.83■□□□□ 0.13
CLPTM1-201ENST00000337392 SS18Q15532 418 aa15.82■□□□□ 0.12
CLPTM1-201ENST00000337392 LINC01620Q4KN68 170 aa15.82■□□□□ 0.12
CLPTM1-201ENST00000337392 REG3AQ06141 175 aa15.81■□□□□ 0.12
CLPTM1-201ENST00000337392 CHCHD10Q8WYQ3 142 aaPredicted RBP15.81■□□□□ 0.12
CLPTM1-201ENST00000337392 C9orf116Q5BN46 136 aaPredicted RBP15.81■□□□□ 0.12
CLPTM1-201ENST00000337392 Q6ZTC4 211 aa15.8■□□□□ 0.12
CLPTM1-201ENST00000337392 ATXN8Q156A1 80 aa15.8■□□□□ 0.12
CLPTM1-201ENST00000337392 LINC00337Q8N6G1 96 aa15.8■□□□□ 0.12
CLPTM1-201ENST00000337392 IGKV2-28A0A075B6P5 120 aa15.79■□□□□ 0.12
CLPTM1-201ENST00000337392 IGKV2D-28P01615 120 aa15.79■□□□□ 0.12
CLPTM1-201ENST00000337392 KLK12Q9UKR0 248 aa15.78■□□□□ 0.12
CLPTM1-201ENST00000337392 CCL18P55774 89 aa15.78■□□□□ 0.12
CLPTM1-201ENST00000337392 COL7A1Q02388 2944 aa15.77■□□□□ 0.12
CLPTM1-201ENST00000337392 C5orf47Q569G3 176 aa15.77■□□□□ 0.12
CLPTM1-201ENST00000337392 MRPL23Q16540 153 aaKnown RBP15.77■□□□□ 0.11
CLPTM1-201ENST00000337392 C15orf53Q8NAA6 179 aa15.77■□□□□ 0.11
CLPTM1-201ENST00000337392 NTN5Q8WTR8 489 aaPredicted RBP15.77■□□□□ 0.11
CLPTM1-201ENST00000337392 SND1-IT1Q9HBX3 110 aa15.77■□□□□ 0.11
CLPTM1-201ENST00000337392 TEX49A0A1B0GTD5 131 aa15.76■□□□□ 0.11
CLPTM1-201ENST00000337392 PRR3P79522 188 aaKnown RBP15.76■□□□□ 0.11
CLPTM1-201ENST00000337392 TMEM126AQ9H061 195 aa15.76■□□□□ 0.11
CLPTM1-201ENST00000337392 C6orf223Q8N319 242 aa15.75■□□□□ 0.11
CLPTM1-201ENST00000337392 HUWE1Q7Z6Z7 4374 aaKnown RBP15.74■□□□□ 0.11
CLPTM1-201ENST00000337392 FAM218AQ96MZ4 157 aa15.73■□□□□ 0.11
CLPTM1-201ENST00000337392 COX6CP09669 75 aa15.73■□□□□ 0.11
CLPTM1-201ENST00000337392 NANOS2P60321 138 aaKnown RBP15.73■□□□□ 0.11
CLPTM1-201ENST00000337392 A0A0J9YWU9 116 aa15.72■□□□□ 0.11
CLPTM1-201ENST00000337392 WFDC10BQ8IUB3 73 aa15.72■□□□□ 0.11
CLPTM1-201ENST00000337392 LOC107984640A0A0U1RRK4 108 aa15.72■□□□□ 0.11
CLPTM1-201ENST00000337392 LST1O00453 97 aa15.71■□□□□ 0.11
CLPTM1-201ENST00000337392 COX7A2LO14548 114 aa15.71■□□□□ 0.11
CLPTM1-201ENST00000337392 MALP21145 153 aa15.71■□□□□ 0.11
CLPTM1-201ENST00000337392 LYPD5Q6UWN5 251 aa15.71■□□□□ 0.11
CLPTM1-201ENST00000337392 KIAA0087Q14695 138 aa15.7■□□□□ 0.1
CLPTM1-201ENST00000337392 CD164L2Q6UWJ8 174 aa15.7■□□□□ 0.1
CLPTM1-201ENST00000337392 KPRPQ5T749 579 aaPredicted RBP15.7■□□□□ 0.1
CLPTM1-201ENST00000337392 STAB2Q8WWQ8 2551 aa15.7■□□□□ 0.1
CLPTM1-201ENST00000337392 C10orf25Q5T742 122 aa15.69■□□□□ 0.1
CLPTM1-201ENST00000337392 LELP1Q5T871 98 aa15.69■□□□□ 0.1
CLPTM1-201ENST00000337392 TRBV10-2A0A0K0K1G8 114 aa15.68■□□□□ 0.1
CLPTM1-201ENST00000337392 IBA57-AS1B1ANH7 110 aa15.68■□□□□ 0.1
CLPTM1-201ENST00000337392 EGFEM1PQ0D2K5 195 aa15.68■□□□□ 0.1
CLPTM1-201ENST00000337392 TRAV8-4A0A0B4J246 113 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 ENHOQ6UWT2 76 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 CRPP02741 224 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 Q8IZM0 81 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 MRAPQ8TCY5 172 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 UBE2WQ96B02 151 aa15.67■□□□□ 0.1
CLPTM1-201ENST00000337392 OR13C6PQ8NH95 151 aa15.65■□□□□ 0.1
CLPTM1-201ENST00000337392 Q9HAA7 133 aa15.65■□□□□ 0.1
CLPTM1-201ENST00000337392 TENM2Q9NT68 2774 aa15.65■□□□□ 0.1
CLPTM1-201ENST00000337392 Q8NDZ9 215 aa15.65■□□□□ 0.1
CLPTM1-201ENST00000337392 UNQ6190/PRO20217Q6UXQ8 127 aa15.64■□□□□ 0.09
CLPTM1-201ENST00000337392 SMIM11BQ8TCY0 68 aa15.64■□□□□ 0.09
CLPTM1-201ENST00000337392 COPS9Q8WXC6 57 aa15.62■□□□□ 0.09
CLPTM1-201ENST00000337392 ESRGQ1W209 222 aa15.6■□□□□ 0.09
CLPTM1-201ENST00000337392 CSMD3Q7Z407 3707 aa15.6■□□□□ 0.09
CLPTM1-201ENST00000337392 FAM19A5Q7Z5A7 132 aaPredicted RBP15.59■□□□□ 0.09
CLPTM1-201ENST00000337392 A0A087WYN8 130 aa15.59■□□□□ 0.09
CLPTM1-201ENST00000337392 TRAV13-2A0A0B4J235 113 aa15.58■□□□□ 0.08
CLPTM1-201ENST00000337392 SPAG11BQ08648 103 aa15.58■□□□□ 0.08
CLPTM1-201ENST00000337392 PRR34Q9NV39 138 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms