RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 B4DSR2 109 aa17.14■□□□□ 0.33
SOX1-201ENST00000330949 K7EQD1 137 aa17.14■□□□□ 0.33
SOX1-201ENST00000330949 TMEM256-PLSCR3K7ERE1 68 aa17.14■□□□□ 0.33
SOX1-201ENST00000330949 INSP01308 110 aa17.14■□□□□ 0.33
SOX1-201ENST00000330949 LINC00336Q6ZUF6 198 aa17.14■□□□□ 0.33
SOX1-201ENST00000330949 TRAV7A0A075B6U4 112 aa17.13■□□□□ 0.33
SOX1-201ENST00000330949 C18orf65Q6ZTR6 163 aa17.11■□□□□ 0.33
SOX1-201ENST00000330949 NBPF19A0A087WUL8 3843 aa17.11■□□□□ 0.33
SOX1-201ENST00000330949 TRGV1A0A0A0MS02 117 aa17.09■□□□□ 0.33
SOX1-201ENST00000330949 KLKP1Q107X0 134 aa17.09■□□□□ 0.33
SOX1-201ENST00000330949 JMJD1CQ15652 2540 aa17.09■□□□□ 0.33
SOX1-201ENST00000330949 AKAP9Q99996 3911 aa17.08■□□□□ 0.33
SOX1-201ENST00000330949 Q8N814 137 aa17.08■□□□□ 0.32
SOX1-201ENST00000330949 KHDC1LQ5JSQ8 128 aa17.07■□□□□ 0.32
SOX1-201ENST00000330949 SMIM26A0A096LP01 95 aa17.06■□□□□ 0.32
SOX1-201ENST00000330949 PRB1P04280 392 aa17.05■□□□□ 0.32
SOX1-201ENST00000330949 SLURP1P55000 103 aa17.05■□□□□ 0.32
SOX1-201ENST00000330949 C1orf43Q9BWL3 253 aa17.04■□□□□ 0.32
SOX1-201ENST00000330949 IGHV3OR16-9A0A0B4J2B5 98 aa17.04■□□□□ 0.32
SOX1-201ENST00000330949 J3QLI3 93 aa17.03■□□□□ 0.32
SOX1-201ENST00000330949 TMEM86BQ8N661 226 aa17.02■□□□□ 0.32
SOX1-201ENST00000330949 IGKV3OR2-268A0A0C4DH90 116 aa17.02■□□□□ 0.32
SOX1-201ENST00000330949 MAP6D1Q9H9H5 199 aa17.02■□□□□ 0.32
SOX1-201ENST00000330949 A0A087WZ39 114 aa17.01■□□□□ 0.31
SOX1-201ENST00000330949 IL17DQ8TAD2 202 aa17.01■□□□□ 0.31
SOX1-201ENST00000330949 UBE2E2Q96LR5 201 aa17.01■□□□□ 0.31
SOX1-201ENST00000330949 C16orf95Q9H693 158 aa16.99■□□□□ 0.31
SOX1-201ENST00000330949 LINC01356Q8N9X3 169 aa16.98■□□□□ 0.31
SOX1-201ENST00000330949 LINC00482Q8N8I6 264 aa16.97■□□□□ 0.31
SOX1-201ENST00000330949 FP248Q71RG6 208 aaPredicted RBP16.97■□□□□ 0.31
SOX1-201ENST00000330949 C11orf44Q8N8P7 122 aa16.97■□□□□ 0.31
SOX1-201ENST00000330949 Q6ZTI0 123 aa16.97■□□□□ 0.31
SOX1-201ENST00000330949 C6orf226Q5I0X4 101 aa16.96■□□□□ 0.3
SOX1-201ENST00000330949 A0A096LNT2 108 aa16.95■□□□□ 0.3
SOX1-201ENST00000330949 NANOS2P60321 138 aaKnown RBP16.95■□□□□ 0.3
SOX1-201ENST00000330949 F8WEM9 126 aa16.94■□□□□ 0.3
SOX1-201ENST00000330949 Q6ZQT0 140 aa16.94■□□□□ 0.3
SOX1-201ENST00000330949 SNURFQ9Y675 71 aa16.94■□□□□ 0.3
SOX1-201ENST00000330949 NDUFC1O43677 76 aa16.94■□□□□ 0.3
SOX1-201ENST00000330949 RNASE1P07998 156 aaKnown RBP16.94■□□□□ 0.3
SOX1-201ENST00000330949 LINC01547P58512 204 aaPredicted RBP16.94■□□□□ 0.3
SOX1-201ENST00000330949 RBM3P98179 157 aaKnown RBP16.93■□□□□ 0.3
SOX1-201ENST00000330949 MTORP42345 2549 aa16.93■□□□□ 0.3
SOX1-201ENST00000330949 A0A1W2PRX2 142 aa16.93■□□□□ 0.3
SOX1-201ENST00000330949 RPL35AP18077 110 aaKnown RBP16.93■□□□□ 0.3
SOX1-201ENST00000330949 RMI2Q96E14 147 aa16.93■□□□□ 0.3
SOX1-201ENST00000330949 IGLV4-60A0A075B6I1 120 aa16.92■□□□□ 0.3
SOX1-201ENST00000330949 C1orf158Q8N1D5 194 aa16.92■□□□□ 0.3
SOX1-201ENST00000330949 ZNF702PQ9H963 129 aa16.92■□□□□ 0.3
SOX1-201ENST00000330949 ACANP16112 2415 aa16.91■□□□□ 0.3
SOX1-201ENST00000330949 LOC110117498A0A087WWA1 95 aa16.91■□□□□ 0.3
SOX1-201ENST00000330949 ATP5EP56381 51 aaPredicted RBP16.91■□□□□ 0.3
SOX1-201ENST00000330949 KRTAP10-9P60411 292 aa16.91■□□□□ 0.3
SOX1-201ENST00000330949 HAMPP81172 84 aa16.9■□□□□ 0.3
SOX1-201ENST00000330949 TRAV10A0A0B4J240 114 aa16.9■□□□□ 0.3
SOX1-201ENST00000330949 F8WDY8 70 aa16.9■□□□□ 0.3
SOX1-201ENST00000330949 C11orf68Q9H3H3 251 aaKnown RBP16.9■□□□□ 0.3
SOX1-201ENST00000330949 APCP25054 2843 aa16.89■□□□□ 0.3
SOX1-201ENST00000330949 WFDC11Q8NEX6 87 aa16.89■□□□□ 0.29
SOX1-201ENST00000330949 DYNLRB2Q8TF09 96 aa16.89■□□□□ 0.29
SOX1-201ENST00000330949 PKIGQ9Y2B9 76 aa16.89■□□□□ 0.29
SOX1-201ENST00000330949 FASNP49327 2511 aaKnown RBP16.88■□□□□ 0.29
SOX1-201ENST00000330949 TRBV7-6A0A0J9YX20 115 aa16.87■□□□□ 0.29
SOX1-201ENST00000330949 ZNF561-AS1K7EIQ3 104 aa16.87■□□□□ 0.29
SOX1-201ENST00000330949 CXCL6P80162 114 aa16.87■□□□□ 0.29
SOX1-201ENST00000330949 Q6ZVQ6 151 aa16.87■□□□□ 0.29
SOX1-201ENST00000330949 UBR5O95071 2799 aaPredicted RBP16.86■□□□□ 0.29
SOX1-201ENST00000330949 ITPR3Q14573 2671 aa16.85■□□□□ 0.29
SOX1-201ENST00000330949 STHQ8IWL8 128 aa16.85■□□□□ 0.29
SOX1-201ENST00000330949 PRR3P79522 188 aaKnown RBP16.85■□□□□ 0.29
SOX1-201ENST00000330949 FLNAP21333 2647 aaKnown RBP16.85■□□□□ 0.29
SOX1-201ENST00000330949 Q8IZM0 81 aa16.84■□□□□ 0.29
SOX1-201ENST00000330949 TRBV6-8A0A0A6YYG3 113 aa16.84■□□□□ 0.29
SOX1-201ENST00000330949 LOC100131303A0A0U1RQF7 123 aa16.84■□□□□ 0.29
SOX1-201ENST00000330949 NOP10Q9NPE3 64 aaKnown RBP16.83■□□□□ 0.29
SOX1-201ENST00000330949 LAMTOR3Q9UHA4 124 aa16.83■□□□□ 0.29
SOX1-201ENST00000330949 LINC00959A0A1B0GUT2 108 aa16.83■□□□□ 0.28
SOX1-201ENST00000330949 C6orf99Q4VX62 202 aa16.83■□□□□ 0.28
SOX1-201ENST00000330949 Q6YL49 198 aa16.83■□□□□ 0.28
SOX1-201ENST00000330949 C6orf223Q8N319 242 aa16.83■□□□□ 0.28
SOX1-201ENST00000330949 SETXQ7Z333 2677 aaKnown RBP16.82■□□□□ 0.28
SOX1-201ENST00000330949 LINC00575Q6W349 94 aa16.82■□□□□ 0.28
SOX1-201ENST00000330949 PDE6GP18545 87 aa16.81■□□□□ 0.28
SOX1-201ENST00000330949 DEFB114Q30KQ6 69 aa16.81■□□□□ 0.28
SOX1-201ENST00000330949 DSCR9P59020 149 aa16.81■□□□□ 0.28
SOX1-201ENST00000330949 Q8N3U1 123 aa16.81■□□□□ 0.28
SOX1-201ENST00000330949 TRGV2A0A075B6R0 118 aa16.8■□□□□ 0.28
SOX1-201ENST00000330949 BBC3Q96PG8 261 aaPredicted RBP16.8■□□□□ 0.28
SOX1-201ENST00000330949 LINC00474Q9P2X8 69 aa16.8■□□□□ 0.28
SOX1-201ENST00000330949 IGHV4-31P0DP07 118 aa16.8■□□□□ 0.28
SOX1-201ENST00000330949 TRBV7-4A0A0J9YYF1 115 aa16.78■□□□□ 0.28
SOX1-201ENST00000330949 MIFP14174 115 aa16.78■□□□□ 0.28
SOX1-201ENST00000330949 BRK1Q8WUW1 75 aa16.78■□□□□ 0.28
SOX1-201ENST00000330949 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
SOX1-201ENST00000330949 CR1P17927 2039 aa16.77■□□□□ 0.28
SOX1-201ENST00000330949 M0R2N4 97 aa16.77■□□□□ 0.28
SOX1-201ENST00000330949 COX17Q14061 63 aa16.77■□□□□ 0.28
SOX1-201ENST00000330949 TRGV4A0A0C4DH28 118 aa16.76■□□□□ 0.27
SOX1-201ENST00000330949 TM2D3Q9BRN9 247 aa16.76■□□□□ 0.27
SOX1-201ENST00000330949 FN1P02751 2386 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms