RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 IGKV2D-30A0A075B6S6 120 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 IGKV2-30P06310 120 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 C7orf65Q6ZTY9 151 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 SPINT4Q6UDR6 99 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 Q8N2B8 174 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 IGLV1-40P01703 118 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 VPREB1P12018 145 aa11.69□□□□□ -0.54
SMAD3-201ENST00000327367 SPATA3Q8NHX4 192 aa11.68□□□□□ -0.54
SMAD3-201ENST00000327367 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 LY6G6CO95867 125 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 IL17DQ8TAD2 202 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 ATRXP46100 2492 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 C11orf71Q6IPW1 123 aa11.67□□□□□ -0.54
SMAD3-201ENST00000327367 FHL2Q14192 279 aa11.66□□□□□ -0.54
SMAD3-201ENST00000327367 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
SMAD3-201ENST00000327367 PRO0461Q9UI25 63 aa11.65□□□□□ -0.54
SMAD3-201ENST00000327367 PLA2G1BP04054 148 aaKnown RBP11.65□□□□□ -0.54
SMAD3-201ENST00000327367 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
SMAD3-201ENST00000327367 ODF3L2Q3SX64 289 aa11.64□□□□□ -0.55
SMAD3-201ENST00000327367 RPS28P62857 69 aaKnown RBP11.64□□□□□ -0.55
SMAD3-201ENST00000327367 TM2D3Q9BRN9 247 aa11.64□□□□□ -0.55
SMAD3-201ENST00000327367 LINC00474Q9P2X8 69 aa11.63□□□□□ -0.55
SMAD3-201ENST00000327367 BRI3O95415 125 aa11.63□□□□□ -0.55
SMAD3-201ENST00000327367 PRRC2AP48634 2157 aaKnown RBP11.63□□□□□ -0.55
SMAD3-201ENST00000327367 ATP11AUNQ6ZP68 121 aa11.62□□□□□ -0.55
SMAD3-201ENST00000327367 CEP192Q8TEP8 1941 aa11.61□□□□□ -0.55
SMAD3-201ENST00000327367 Q6ZRU5 148 aa11.61□□□□□ -0.55
SMAD3-201ENST00000327367 OXLD1Q5BKU9 147 aa11.6□□□□□ -0.55
SMAD3-201ENST00000327367 C8orf87E5RJ46 101 aa11.59□□□□□ -0.55
SMAD3-201ENST00000327367 Q6ZTC4 211 aa11.59□□□□□ -0.55
SMAD3-201ENST00000327367 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
SMAD3-201ENST00000327367 AGRNO00468 2067 aa11.57□□□□□ -0.56
SMAD3-201ENST00000327367 MDFIQ99750 246 aa11.57□□□□□ -0.56
SMAD3-201ENST00000327367 TECTAO75443 2155 aa11.56□□□□□ -0.56
SMAD3-201ENST00000327367 AVPP01185 164 aa11.56□□□□□ -0.56
SMAD3-201ENST00000327367 SMCR5Q8TEV8 140 aa11.56□□□□□ -0.56
SMAD3-201ENST00000327367 C6orf48Q9UBA6 75 aa11.55□□□□□ -0.56
SMAD3-201ENST00000327367 EXPH5Q8NEV8 1989 aa11.55□□□□□ -0.56
SMAD3-201ENST00000327367 COL5A1P20908 1838 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-201ENST00000327367 DSCAMO60469 2012 aa11.55□□□□□ -0.56
SMAD3-201ENST00000327367 LY6G6DO95868 133 aa11.55□□□□□ -0.56
SMAD3-201ENST00000327367 RPL37AP61513 92 aaKnown RBP11.55□□□□□ -0.56
SMAD3-201ENST00000327367 A8MUN3 132 aa11.54□□□□□ -0.56
SMAD3-201ENST00000327367 ACYP2P14621 99 aa11.54□□□□□ -0.56
SMAD3-201ENST00000327367 PTPRQQ9UMZ3 2332 aa11.53□□□□□ -0.56
SMAD3-201ENST00000327367 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
SMAD3-201ENST00000327367 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
SMAD3-201ENST00000327367 IGLV5-52A0A0A0MRZ9 124 aa11.52□□□□□ -0.57
SMAD3-201ENST00000327367 CSPG4Q6UVK1 2322 aa11.52□□□□□ -0.57
SMAD3-201ENST00000327367 NHLRC4P0CG21 123 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-201ENST00000327367 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
SMAD3-201ENST00000327367 CDSNQ15517 529 aa11.51□□□□□ -0.57
SMAD3-201ENST00000327367 COX8CQ7Z4L0 72 aa11.5□□□□□ -0.57
SMAD3-201ENST00000327367 Q6ZQT0 140 aa11.5□□□□□ -0.57
SMAD3-201ENST00000327367 MUC4Q99102 2169 aa11.49□□□□□ -0.57
SMAD3-201ENST00000327367 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
SMAD3-201ENST00000327367 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
SMAD3-201ENST00000327367 LINC01546A6NGU7 62 aa11.47□□□□□ -0.57
SMAD3-201ENST00000327367 SMR3AQ99954 134 aa11.47□□□□□ -0.57
SMAD3-201ENST00000327367 RAI1Q7Z5J4 1906 aaPredicted RBP11.46□□□□□ -0.58
SMAD3-201ENST00000327367 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.58
SMAD3-201ENST00000327367 NAV3Q8IVL0 2385 aa11.46□□□□□ -0.58
SMAD3-201ENST00000327367 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
SMAD3-201ENST00000327367 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
SMAD3-201ENST00000327367 NUPR2A6NF83 97 aa11.44□□□□□ -0.58
SMAD3-201ENST00000327367 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
SMAD3-201ENST00000327367 LRP4O75096 1905 aa11.43□□□□□ -0.58
SMAD3-201ENST00000327367 FHL3Q13643 280 aa11.43□□□□□ -0.58
SMAD3-201ENST00000327367 MOBPQ13875 183 aa11.43□□□□□ -0.58
SMAD3-201ENST00000327367 SPACA4Q8TDM5 124 aa11.42□□□□□ -0.58
SMAD3-201ENST00000327367 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
SMAD3-201ENST00000327367 HIVEP2P31629 2446 aa11.4□□□□□ -0.58
SMAD3-201ENST00000327367 BCE1O60756 84 aa11.4□□□□□ -0.58
SMAD3-201ENST00000327367 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
SMAD3-201ENST00000327367 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.58
SMAD3-201ENST00000327367 SRCAPQ6ZRS2 3230 aa11.39□□□□□ -0.59
SMAD3-201ENST00000327367 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
SMAD3-201ENST00000327367 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
SMAD3-201ENST00000327367 OTOGLQ3ZCN5 2332 aa11.38□□□□□ -0.59
SMAD3-201ENST00000327367 COA5Q86WW8 74 aa11.38□□□□□ -0.59
SMAD3-201ENST00000327367 LINC00476Q8WZB0 136 aa11.38□□□□□ -0.59
SMAD3-201ENST00000327367 C11orf72Q8NBR9 251 aa11.38□□□□□ -0.59
SMAD3-201ENST00000327367 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
SMAD3-201ENST00000327367 IGHV3OR16-9A0A0B4J2B5 98 aa11.37□□□□□ -0.59
SMAD3-201ENST00000327367 SPG11Q96JI7 2443 aa11.36□□□□□ -0.59
SMAD3-201ENST00000327367 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
SMAD3-201ENST00000327367 ELOF1P60002 83 aaKnown RBP11.36□□□□□ -0.59
SMAD3-201ENST00000327367 LINC00315P59091 139 aa11.36□□□□□ -0.59
SMAD3-201ENST00000327367 ZFHX2Q9C0A1 2572 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-201ENST00000327367 LOC110117498A0A087WWA1 95 aa11.36□□□□□ -0.59
SMAD3-201ENST00000327367 PTPN13Q12923 2485 aa11.33□□□□□ -0.6
SMAD3-201ENST00000327367 CPAMD8Q8IZJ3 1885 aa11.33□□□□□ -0.6
SMAD3-201ENST00000327367 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
SMAD3-201ENST00000327367 CHTF8P0CG12 524 aa11.32□□□□□ -0.6
SMAD3-201ENST00000327367 K7EQZ3 153 aa11.32□□□□□ -0.6
SMAD3-201ENST00000327367 TRBV7-4A0A0J9YYF1 115 aa11.31□□□□□ -0.6
SMAD3-201ENST00000327367 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-201ENST00000327367 CD164Q04900 197 aa11.31□□□□□ -0.6
SMAD3-201ENST00000327367 F8WDY8 70 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms