RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 hDV103S1A0JD37 113 aa14.9□□□□□ -0.02
RNF40-201ENST00000324685 LYPD5Q6UWN5 251 aa14.9□□□□□ -0.02
RNF40-201ENST00000324685 HCFC1P51610 2035 aa14.9□□□□□ -0.02
RNF40-201ENST00000324685 C10orf142B7Z368 130 aa14.89□□□□□ -0.03
RNF40-201ENST00000324685 CXCL6P80162 114 aa14.89□□□□□ -0.03
RNF40-201ENST00000324685 RETNLBQ9BQ08 111 aa14.89□□□□□ -0.03
RNF40-201ENST00000324685 MUC6Q6W4X9 2439 aa14.89□□□□□ -0.03
RNF40-201ENST00000324685 PSPHP1O15172 72 aa14.88□□□□□ -0.03
RNF40-201ENST00000324685 PRR14LQ5THK1 2151 aa14.87□□□□□ -0.03
RNF40-201ENST00000324685 LINC00846Q9NV44 126 aa14.87□□□□□ -0.03
RNF40-201ENST00000324685 TANC2Q9HCD6 1990 aa14.87□□□□□ -0.03
RNF40-201ENST00000324685 SMR3AQ99954 134 aa14.86□□□□□ -0.03
RNF40-201ENST00000324685 X6R8D5 127 aa14.86□□□□□ -0.03
RNF40-201ENST00000324685 LIMD2Q9BT23 127 aa14.84□□□□□ -0.03
RNF40-201ENST00000324685 Q8N2B8 174 aa14.84□□□□□ -0.03
RNF40-201ENST00000324685 Q6ZRU5 148 aa14.83□□□□□ -0.04
RNF40-201ENST00000324685 KRTAP10-9P60411 292 aa14.83□□□□□ -0.04
RNF40-201ENST00000324685 LINC01546A6NGU7 62 aa14.82□□□□□ -0.04
RNF40-201ENST00000324685 LINC00337Q8N6G1 96 aa14.82□□□□□ -0.04
RNF40-201ENST00000324685 SPINK1P00995 79 aa14.82□□□□□ -0.04
RNF40-201ENST00000324685 DEFB116Q30KQ4 102 aa14.82□□□□□ -0.04
RNF40-201ENST00000324685 CEP192Q8TEP8 1941 aa14.81□□□□□ -0.04
RNF40-201ENST00000324685 C1orf134Q5TEV5 83 aa14.8□□□□□ -0.04
RNF40-201ENST00000324685 CRYGAP11844 174 aa14.79□□□□□ -0.04
RNF40-201ENST00000324685 SBSPONQ8IVN8 264 aa14.79□□□□□ -0.04
RNF40-201ENST00000324685 WNK1Q9H4A3 2382 aa14.79□□□□□ -0.04
RNF40-201ENST00000324685 IGLV5-39A0A0G2JS06 123 aa14.78□□□□□ -0.04
RNF40-201ENST00000324685 A8MTW9 85 aa14.77□□□□□ -0.04
RNF40-201ENST00000324685 C1orf64Q8NEQ6 169 aa14.77□□□□□ -0.04
RNF40-201ENST00000324685 KIF25-AS1Q9Y6Z4 181 aa14.77□□□□□ -0.04
RNF40-201ENST00000324685 LRP4O75096 1905 aa14.77□□□□□ -0.04
RNF40-201ENST00000324685 SMCR5Q8TEV8 140 aa14.77□□□□□ -0.05
RNF40-201ENST00000324685 PLXNB1O43157 2135 aa14.76□□□□□ -0.05
RNF40-201ENST00000324685 C22orf24Q9Y442 160 aa14.76□□□□□ -0.05
RNF40-201ENST00000324685 PRLHP81277 87 aa14.75□□□□□ -0.05
RNF40-201ENST00000324685 EML5Q05BV3 1969 aa14.75□□□□□ -0.05
RNF40-201ENST00000324685 FSHBP01225 129 aa14.74□□□□□ -0.05
RNF40-201ENST00000324685 CDIP1Q9H305 208 aa14.74□□□□□ -0.05
RNF40-201ENST00000324685 SORL1Q92673 2214 aa14.74□□□□□ -0.05
RNF40-201ENST00000324685 C11orf72Q8NBR9 251 aa14.72□□□□□ -0.05
RNF40-201ENST00000324685 ACACBO00763 2458 aa14.72□□□□□ -0.05
RNF40-201ENST00000324685 A0A1W2PPR1 153 aa14.71□□□□□ -0.05
RNF40-201ENST00000324685 SMIM29Q86T20 159 aa14.71□□□□□ -0.06
RNF40-201ENST00000324685 BCE1O60756 84 aa14.7□□□□□ -0.06
RNF40-201ENST00000324685 KIAA0087Q14695 138 aa14.7□□□□□ -0.06
RNF40-201ENST00000324685 SPATA3Q8NHX4 192 aa14.7□□□□□ -0.06
RNF40-201ENST00000324685 ARHGAP32A7KAX9 2087 aa14.69□□□□□ -0.06
RNF40-201ENST00000324685 TP53AIP1Q9HCN2 124 aa14.68□□□□□ -0.06
RNF40-201ENST00000324685 SPG11Q96JI7 2443 aa14.68□□□□□ -0.06
RNF40-201ENST00000324685 CSPG4Q6UVK1 2322 aa14.66□□□□□ -0.06
RNF40-201ENST00000324685 A0A1B0GW54 56 aa14.66□□□□□ -0.06
RNF40-201ENST00000324685 OTOGLQ3ZCN5 2332 aa14.66□□□□□ -0.06
RNF40-201ENST00000324685 RAI1Q7Z5J4 1906 aaPredicted RBP14.66□□□□□ -0.06
RNF40-201ENST00000324685 IGHV3OR16-9A0A0B4J2B5 98 aa14.65□□□□□ -0.06
RNF40-201ENST00000324685 NHLRC4P0CG21 123 aaPredicted RBP14.64□□□□□ -0.07
RNF40-201ENST00000324685 C7orf65Q6ZTY9 151 aa14.64□□□□□ -0.07
RNF40-201ENST00000324685 FHL3Q13643 280 aa14.63□□□□□ -0.07
RNF40-201ENST00000324685 FAM19A4Q96LR4 140 aa14.63□□□□□ -0.07
RNF40-201ENST00000324685 IGKV2D-30A0A075B6S6 120 aa14.62□□□□□ -0.07
RNF40-201ENST00000324685 IGKV2-30P06310 120 aa14.62□□□□□ -0.07
RNF40-201ENST00000324685 PTPRSQ13332 1948 aa14.62□□□□□ -0.07
RNF40-201ENST00000324685 CPAMD8Q8IZJ3 1885 aa14.61□□□□□ -0.07
RNF40-201ENST00000324685 A0A1B0GU69 56 aa14.61□□□□□ -0.07
RNF40-201ENST00000324685 PRO0628Q9UI54 55 aa14.61□□□□□ -0.07
RNF40-201ENST00000324685 IGLV5-45A0A087WSX0 123 aa14.6□□□□□ -0.07
RNF40-201ENST00000324685 ACYP2P14621 99 aa14.6□□□□□ -0.07
RNF40-201ENST00000324685 LINC00315P59091 139 aa14.6□□□□□ -0.07
RNF40-201ENST00000324685 LINC00167Q96N53 147 aa14.59□□□□□ -0.07
RNF40-201ENST00000324685 NAV3Q8IVL0 2385 aa14.58□□□□□ -0.08
RNF40-201ENST00000324685 Q9UF83 564 aa14.58□□□□□ -0.08
RNF40-201ENST00000324685 ELOF1P60002 83 aaKnown RBP14.57□□□□□ -0.08
RNF40-201ENST00000324685 C6orf48Q9UBA6 75 aa14.57□□□□□ -0.08
RNF40-201ENST00000324685 CUL9Q8IWT3 2517 aa14.56□□□□□ -0.08
RNF40-201ENST00000324685 COL5A1P20908 1838 aaPredicted RBP14.56□□□□□ -0.08
RNF40-201ENST00000324685 H3BPC8 53 aa14.56□□□□□ -0.08
RNF40-201ENST00000324685 SMCPP49901 116 aaPredicted RBP14.55□□□□□ -0.08
RNF40-201ENST00000324685 LOC110117498A0A087WWA1 95 aa14.53□□□□□ -0.08
RNF40-201ENST00000324685 H3BNG1 76 aa14.52□□□□□ -0.08
RNF40-201ENST00000324685 MOBPQ13875 183 aa14.52□□□□□ -0.08
RNF40-201ENST00000324685 FAM218AQ96MZ4 157 aa14.51□□□□□ -0.09
RNF40-201ENST00000324685 BDP1A6H8Y1 2624 aa14.51□□□□□ -0.09
RNF40-201ENST00000324685 Q6ZQT0 140 aa14.51□□□□□ -0.09
RNF40-201ENST00000324685 NOTCH2Q04721 2471 aa14.51□□□□□ -0.09
RNF40-201ENST00000324685 PRRC2AP48634 2157 aaKnown RBP14.5□□□□□ -0.09
RNF40-201ENST00000324685 RPS28P62857 69 aaKnown RBP14.5□□□□□ -0.09
RNF40-201ENST00000324685 MDFIQ99750 246 aa14.49□□□□□ -0.09
RNF40-201ENST00000324685 SPAG11AQ6PDA7 123 aa14.49□□□□□ -0.09
RNF40-201ENST00000324685 PRO0461Q9UI25 63 aa14.49□□□□□ -0.09
RNF40-201ENST00000324685 EXPH5Q8NEV8 1989 aa14.49□□□□□ -0.09
RNF40-201ENST00000324685 SPACA4Q8TDM5 124 aa14.47□□□□□ -0.09
RNF40-201ENST00000324685 SONP18583 2426 aaKnown RBP14.47□□□□□ -0.09
RNF40-201ENST00000324685 Q8NBF4 154 aa14.46□□□□□ -0.09
RNF40-201ENST00000324685 HIVEP3Q5T1R4 2406 aa14.46□□□□□ -0.09
RNF40-201ENST00000324685 PTPN13Q12923 2485 aa14.46□□□□□ -0.09
RNF40-201ENST00000324685 ADAMTS20P59510 1910 aa14.46□□□□□ -0.1
RNF40-201ENST00000324685 ATRXP46100 2492 aa14.46□□□□□ -0.1
RNF40-201ENST00000324685 Q6ZRX8 168 aa14.46□□□□□ -0.1
RNF40-201ENST00000324685 NAV2Q8IVL1 2488 aa14.44□□□□□ -0.1
RNF40-201ENST00000324685 LINC00476Q8WZB0 136 aa14.44□□□□□ -0.1
RNF40-201ENST00000324685 TTC28Q96AY4 2481 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 602.9 ms