RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 SLC7A5P1Q8MH63 180 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 TPPP3Q9BW30 176 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 TRAV13-1A0A0B4J241 112 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 LOC105371267A0A1B0GV96 52 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 PPP1R2P9O14990 202 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 SSTP61278 116 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 RPL7L1Q6DKI1 246 aaKnown RBP1.47□□□□□ -2.17
HIF1A-201ENST00000323441 Q8NBF4 154 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 ENKURQ8TC29 256 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 FAM104AQ969W3 186 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 PLEKHB2Q96CS7 222 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 RNASE7Q9H1E1 156 aaKnown RBP1.47□□□□□ -2.17
HIF1A-201ENST00000323441 GEMIN7Q9H840 131 aaKnown RBP1.47□□□□□ -2.17
HIF1A-201ENST00000323441 SPANXA1Q9NS26 97 aa1.47□□□□□ -2.17
HIF1A-201ENST00000323441 TGIF2-C20orf24A0A0A6YYL0 155 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 UMAD1C9J7I0 102 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 SSNA1O43805 119 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR2EP22531 72 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR2BP35325 72 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR2AP35326 72 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 CENPWQ5EE01 88 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 Q6ZUT4 128 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 TMEM191AQ9H0A3 160 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 MANBALQ9NQG1 85 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 UBE2AP49459 152 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 FAM19A3Q7Z5A8 133 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 Q8IZM0 81 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 LINC00167Q96N53 147 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 GNG4P50150 75 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 DEFA3P59666 94 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 HBBP68871 147 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 CT83Q5H943 113 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 S100ZQ8WXG8 99 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR4Q96PI1 79 aa1.46□□□□□ -2.18
HIF1A-201ENST00000323441 PDE6DO43924 150 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 NPSP0C0P6 89 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 FCER1GP30273 86 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 CXCL5P42830 114 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 SUMO2P61956 95 aaKnown RBP1.45□□□□□ -2.18
HIF1A-201ENST00000323441 PNRC1Q12796 327 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-201ENST00000323441 KCNRGQ8N5I3 272 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 C20orf78Q9BR46 151 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 PYGO1Q9Y3Y4 419 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 TRBV24-1A0A075B6N3 115 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 RAB4AP20338 218 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 KRTAP10-5P60370 271 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 FAM231DQ6ZW35 169 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 LINC00469Q8N7U9 141 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 NRACQ8N912 160 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 MPLKIPQ8TAP9 179 aa1.45□□□□□ -2.18
HIF1A-201ENST00000323441 ALKBH7Q9BT30 221 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-201ENST00000323441 ZNF706Q9Y5V0 76 aaPredicted RBP1.45□□□□□ -2.18
HIF1A-201ENST00000323441 TRBV20OR9-2A0A075B6H5 130 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 F8VRH5 84 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 GIPP09681 153 aaPredicted RBP1.44□□□□□ -2.18
HIF1A-201ENST00000323441 C2orf82Q6UX34 121 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 Q6ZN92 141 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 LINC01551Q86U37 167 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 SFT2D1Q8WV19 159 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 IFITM10A6NMD0 228 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 A8MWL6 223 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 RNASE13Q5GAN3 156 aaKnown RBP1.44□□□□□ -2.18
HIF1A-201ENST00000323441 KRTAP5-4Q6L8H1 288 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 LINC00862A6NCI5 91 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 LGALS3P17931 250 aaKnown RBP1.44□□□□□ -2.18
HIF1A-201ENST00000323441 TAGLN2P37802 199 aaKnown RBP1.44□□□□□ -2.18
HIF1A-201ENST00000323441 CKS1BP61024 79 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 SSBP3-AS1Q7Z2R9 100 aa1.44□□□□□ -2.18
HIF1A-201ENST00000323441 A0A1B0GUT8 65 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 RPL37AP8A6NKH3 93 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 PRSS2P07478 247 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 ZNF345Q14585 488 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 BORCS7Q96B45 105 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 TMEM126AQ9H061 195 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 XAGE1AQ9HD64 81 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 NDUFA13Q9P0J0 144 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 C20orf202A1L168 122 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 IFITM3Q01628 133 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 KRTAP15-1Q3LI76 137 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 C6orf226Q5I0X4 101 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 K7EN84 100 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 M0R378 163 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 IFI27P40305 119 aaPredicted RBP1.43□□□□□ -2.18
HIF1A-201ENST00000323441 DEFA1P59665 94 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 RPL39P62891 51 aaKnown RBP1.43□□□□□ -2.18
HIF1A-201ENST00000323441 SEC11AP67812 179 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 Q5BKY6 102 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 CBLN2Q8IUK8 224 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 NKAPP1Q8N9T2 125 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 FAM213BQ8TBF2 198 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 TMEM141Q96I45 108 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 AMELXQ99217 191 aa1.43□□□□□ -2.18
HIF1A-201ENST00000323441 TMA7Q9Y2S6 64 aaKnown RBP1.43□□□□□ -2.18
HIF1A-201ENST00000323441 IGLV4-3A0A075B6K6 122 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 TEX46H3BTG2 121 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 SPRR2DP22532 72 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 PRLHP81277 87 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 FAM19A1Q7Z5A9 133 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 AMN1Q8IY45 258 aa1.42□□□□□ -2.18
HIF1A-201ENST00000323441 C2orf88Q9BSF0 95 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms