RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 JOSD1Q15040 202 aaPredicted RBP13.76□□□□□ -0.21
YBX1-201ENST00000321358 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
YBX1-201ENST00000321358 A0A1B0GVY2 172 aa13.75□□□□□ -0.21
YBX1-201ENST00000321358 E9PLD3 99 aa13.75□□□□□ -0.21
YBX1-201ENST00000321358 UNQ6190/PRO20217Q6UXQ8 127 aa13.75□□□□□ -0.21
YBX1-201ENST00000321358 Q6ZRU5 148 aa13.75□□□□□ -0.21
YBX1-201ENST00000321358 LGALS3P17931 250 aaKnown RBP13.74□□□□□ -0.21
YBX1-201ENST00000321358 J3QQQ9 107 aa13.74□□□□□ -0.21
YBX1-201ENST00000321358 FUSP35637 526 aaKnown RBP eCLIP13.74□□□□□ -0.21
YBX1-201ENST00000321358 PKIGQ9Y2B9 76 aa13.74□□□□□ -0.21
YBX1-201ENST00000321358 TRBV30A0A0K0K1B3 111 aa13.73□□□□□ -0.21
YBX1-201ENST00000321358 C9orf163Q8N9P6 203 aa13.73□□□□□ -0.21
YBX1-201ENST00000321358 RNF151Q2KHN1 245 aa13.72□□□□□ -0.21
YBX1-201ENST00000321358 GCSHP23434 173 aa13.71□□□□□ -0.21
YBX1-201ENST00000321358 C10orf25Q5T742 122 aa13.71□□□□□ -0.21
YBX1-201ENST00000321358 NDUFA12Q9UI09 145 aa13.71□□□□□ -0.21
YBX1-201ENST00000321358 MYMXA0A1B0GTQ4 84 aa13.7□□□□□ -0.22
YBX1-201ENST00000321358 NMUP48645 174 aa13.7□□□□□ -0.22
YBX1-201ENST00000321358 C16orf90A8MZG2 172 aa13.69□□□□□ -0.22
YBX1-201ENST00000321358 HERV-K104P63124 156 aa13.69□□□□□ -0.22
YBX1-201ENST00000321358 C6orf48Q9UBA6 75 aa13.69□□□□□ -0.22
YBX1-201ENST00000321358 TSPEAR-AS2P59090 65 aa13.67□□□□□ -0.22
YBX1-201ENST00000321358 MAJINQ3KP22 176 aa13.67□□□□□ -0.22
YBX1-201ENST00000321358 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
YBX1-201ENST00000321358 ANKRD39Q53RE8 183 aa13.67□□□□□ -0.22
YBX1-201ENST00000321358 PYY3Q5JQD4 70 aa13.67□□□□□ -0.22
YBX1-201ENST00000321358 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
YBX1-201ENST00000321358 LOC107984640A0A0U1RRK4 108 aa13.66□□□□□ -0.22
YBX1-201ENST00000321358 LINC00587B1AMM8 73 aa13.65□□□□□ -0.22
YBX1-201ENST00000321358 VAMP8Q9BV40 100 aa13.65□□□□□ -0.22
YBX1-201ENST00000321358 HECTD4Q9Y4D8 3996 aa13.65□□□□□ -0.22
YBX1-201ENST00000321358 IGKV2D-26A0A0A0MRZ7 120 aa13.64□□□□□ -0.23
YBX1-201ENST00000321358 C9orf116Q5BN46 136 aaPredicted RBP13.64□□□□□ -0.23
YBX1-201ENST00000321358 PKD1P98161 4303 aa13.64□□□□□ -0.23
YBX1-201ENST00000321358 SDIM1Q6ZPB5 146 aa13.64□□□□□ -0.23
YBX1-201ENST00000321358 DNAH11Q96DT5 4516 aa13.63□□□□□ -0.23
YBX1-201ENST00000321358 RPL18AQ02543 176 aaKnown RBP13.63□□□□□ -0.23
YBX1-201ENST00000321358 MEIG1Q5JSS6 88 aa13.63□□□□□ -0.23
YBX1-201ENST00000321358 ZNF815PA8K554 130 aa13.62□□□□□ -0.23
YBX1-201ENST00000321358 NDUFC2-KCTD14E9PQ53 114 aa13.62□□□□□ -0.23
YBX1-201ENST00000321358 COX17Q14061 63 aa13.62□□□□□ -0.23
YBX1-201ENST00000321358 ERG28Q9UKR5 140 aa13.62□□□□□ -0.23
YBX1-201ENST00000321358 TLX1NBP0CAT3 122 aa13.61□□□□□ -0.23
YBX1-201ENST00000321358 PFN2P35080 140 aa13.61□□□□□ -0.23
YBX1-201ENST00000321358 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
YBX1-201ENST00000321358 GAGE2BQ13066 116 aa13.6□□□□□ -0.23
YBX1-201ENST00000321358 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
YBX1-201ENST00000321358 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
YBX1-201ENST00000321358 LOC105371267A0A1B0GV96 52 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 LINC00158P58513 81 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 S100A12P80511 92 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 DPH3Q96FX2 82 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 KRTAP10-1P60331 282 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 SPATA45Q537H7 98 aa13.59□□□□□ -0.23
YBX1-201ENST00000321358 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
YBX1-201ENST00000321358 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
YBX1-201ENST00000321358 IGKV2-24A0A0C4DH68 120 aa13.57□□□□□ -0.24
YBX1-201ENST00000321358 SCGB1D4Q6XE38 83 aa13.57□□□□□ -0.24
YBX1-201ENST00000321358 Q6ZRP5 223 aa13.57□□□□□ -0.24
YBX1-201ENST00000321358 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
YBX1-201ENST00000321358 TTTY13Q9BZ97 58 aa13.57□□□□□ -0.24
YBX1-201ENST00000321358 PTTG1IPP53801 180 aa13.56□□□□□ -0.24
YBX1-201ENST00000321358 A0A096LNI7 61 aa13.55□□□□□ -0.24
YBX1-201ENST00000321358 A0A0J9YXY3 114 aa13.55□□□□□ -0.24
YBX1-201ENST00000321358 A0A0U1RRA0 63 aa13.55□□□□□ -0.24
YBX1-201ENST00000321358 SMIM13P0DJ93 91 aa13.55□□□□□ -0.24
YBX1-201ENST00000321358 SMIM6P0DI80 62 aa13.54□□□□□ -0.24
YBX1-201ENST00000321358 CHTF8P0CG12 524 aa13.52□□□□□ -0.25
YBX1-201ENST00000321358 COX8AP10176 69 aa13.52□□□□□ -0.25
YBX1-201ENST00000321358 PKHD1P08F94 4074 aa13.52□□□□□ -0.25
YBX1-201ENST00000321358 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
YBX1-201ENST00000321358 XAGE1AQ9HD64 81 aa13.5□□□□□ -0.25
YBX1-201ENST00000321358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.5□□□□□ -0.25
YBX1-201ENST00000321358 TIMM17BO60830 172 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 MIR7-3HGQ8N6C7 128 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 SPACA4Q8TDM5 124 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 Q6ZSA8 131 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
YBX1-201ENST00000321358 DLEU1O43261 78 aa13.48□□□□□ -0.25
YBX1-201ENST00000321358 SLC25A34Q6PIV7 304 aa13.48□□□□□ -0.25
YBX1-201ENST00000321358 FAM30AQ9NZY2 134 aa13.48□□□□□ -0.25
YBX1-201ENST00000321358 DNAH5Q8TE73 4624 aa13.48□□□□□ -0.25
YBX1-201ENST00000321358 MIEN1Q9BRT3 115 aa13.47□□□□□ -0.25
YBX1-201ENST00000321358 DYNC1H1Q14204 4646 aaKnown RBP13.46□□□□□ -0.25
YBX1-201ENST00000321358 PANO1I0J062 215 aa13.45□□□□□ -0.26
YBX1-201ENST00000321358 C9orf129Q5T035 196 aaKnown RBP13.45□□□□□ -0.26
YBX1-201ENST00000321358 DAND5Q8N907 189 aa13.45□□□□□ -0.26
YBX1-201ENST00000321358 KIAA1109Q2LD37 5005 aa13.45□□□□□ -0.26
YBX1-201ENST00000321358 HERC2O95714 4834 aa13.44□□□□□ -0.26
YBX1-201ENST00000321358 A0A087WYN8 130 aa13.44□□□□□ -0.26
YBX1-201ENST00000321358 ADAMTSL4-AS1Q5T5F5 129 aa13.44□□□□□ -0.26
YBX1-201ENST00000321358 COPS9Q8WXC6 57 aa13.43□□□□□ -0.26
YBX1-201ENST00000321358 Q6ZVH6 145 aa13.42□□□□□ -0.26
YBX1-201ENST00000321358 LITAFQ99732 161 aa13.42□□□□□ -0.26
YBX1-201ENST00000321358 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
YBX1-201ENST00000321358 SRSF9Q13242 221 aaKnown RBP eCLIP13.41□□□□□ -0.26
YBX1-201ENST00000321358 SCXQ7RTU7 201 aa13.4□□□□□ -0.26
YBX1-201ENST00000321358 FAM19A5Q7Z5A7 132 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms