RNA–Protein interactions for RNA: ENST00000317419.7

RABGAP1-201, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 2,186 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-201ENST00000317419 NDUFA1O15239 70 aa12.25□□□□□ -0.45
RABGAP1-201ENST00000317419 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
RABGAP1-201ENST00000317419 TSPEAR-AS2P59090 65 aa12.24□□□□□ -0.45
RABGAP1-201ENST00000317419 C10orf25Q5T742 122 aa12.24□□□□□ -0.45
RABGAP1-201ENST00000317419 C2orf82Q6UX34 121 aa12.24□□□□□ -0.45
RABGAP1-201ENST00000317419 UNQ6190/PRO20217Q6UXQ8 127 aa12.24□□□□□ -0.45
RABGAP1-201ENST00000317419 C9orf163Q8N9P6 203 aa12.24□□□□□ -0.45
RABGAP1-201ENST00000317419 CARD19Q96LW7 228 aa12.23□□□□□ -0.45
RABGAP1-201ENST00000317419 IGLV5-52A0A0A0MRZ9 124 aa12.23□□□□□ -0.45
RABGAP1-201ENST00000317419 ZNF625Q96I27 306 aaPredicted RBP12.23□□□□□ -0.45
RABGAP1-201ENST00000317419 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 FUSP35637 526 aaKnown RBP eCLIP12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 CKS1BP61024 79 aa12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 ANKRD39Q53RE8 183 aa12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 C6orf48Q9UBA6 75 aa12.22□□□□□ -0.45
RABGAP1-201ENST00000317419 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.45
RABGAP1-201ENST00000317419 LOC105371267A0A1B0GV96 52 aa12.21□□□□□ -0.45
RABGAP1-201ENST00000317419 J3QQQ9 107 aa12.21□□□□□ -0.45
RABGAP1-201ENST00000317419 SFTA2Q6UW10 78 aa12.2□□□□□ -0.46
RABGAP1-201ENST00000317419 DYNC1H1Q14204 4646 aaKnown RBP12.2□□□□□ -0.46
RABGAP1-201ENST00000317419 IGKV2D-26A0A0A0MRZ7 120 aa12.2□□□□□ -0.46
RABGAP1-201ENST00000317419 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
RABGAP1-201ENST00000317419 NMUP48645 174 aa12.18□□□□□ -0.46
RABGAP1-201ENST00000317419 DNAH8Q96JB1 4490 aa12.18□□□□□ -0.46
RABGAP1-201ENST00000317419 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
RABGAP1-201ENST00000317419 TLX1NBP0CAT3 122 aa12.17□□□□□ -0.46
RABGAP1-201ENST00000317419 SDIM1Q6ZPB5 146 aa12.17□□□□□ -0.46
RABGAP1-201ENST00000317419 LGALS3P17931 250 aaKnown RBP12.16□□□□□ -0.46
RABGAP1-201ENST00000317419 PKHD1P08F94 4074 aa12.16□□□□□ -0.46
RABGAP1-201ENST00000317419 GCSHP23434 173 aa12.16□□□□□ -0.46
RABGAP1-201ENST00000317419 HSBP1L1C9JCN9 74 aa12.15□□□□□ -0.46
RABGAP1-201ENST00000317419 HERV-K104P63124 156 aa12.15□□□□□ -0.46
RABGAP1-201ENST00000317419 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.47
RABGAP1-201ENST00000317419 LINC01620Q4KN68 170 aa12.15□□□□□ -0.47
RABGAP1-201ENST00000317419 C9orf116Q5BN46 136 aaPredicted RBP12.14□□□□□ -0.47
RABGAP1-201ENST00000317419 PKIGQ9Y2B9 76 aa12.13□□□□□ -0.47
RABGAP1-201ENST00000317419 LOC107984640A0A0U1RRK4 108 aa12.12□□□□□ -0.47
RABGAP1-201ENST00000317419 KRTAP10-1P60331 282 aa12.12□□□□□ -0.47
RABGAP1-201ENST00000317419 LRP1BQ9NZR2 4599 aa12.12□□□□□ -0.47
RABGAP1-201ENST00000317419 C16orf90A8MZG2 172 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 COX17Q14061 63 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 TTTY13Q9BZ97 58 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 NDUFC2-KCTD14E9PQ53 114 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 VAMP8Q9BV40 100 aa12.11□□□□□ -0.47
RABGAP1-201ENST00000317419 PCP2Q8IVA1 136 aa12.1□□□□□ -0.47
RABGAP1-201ENST00000317419 Q6ZRP5 223 aa12.09□□□□□ -0.47
RABGAP1-201ENST00000317419 CIRBPQ14011 172 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-201ENST00000317419 Q6ZSA8 131 aa12.09□□□□□ -0.47
RABGAP1-201ENST00000317419 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 EPPK1P58107 5090 aaKnown RBP12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 A0A096LNI7 61 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 SPATA45Q537H7 98 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 PAM16Q9Y3D7 125 aa12.08□□□□□ -0.48
RABGAP1-201ENST00000317419 SMIM6P0DI80 62 aa12.07□□□□□ -0.48
RABGAP1-201ENST00000317419 PANO1I0J062 215 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 COX8AP10176 69 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 DLEU1O43261 78 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 TIMM17BO60830 172 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 SMIM13P0DJ93 91 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 PFN2P35080 140 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 RPL18AQ02543 176 aaKnown RBP12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.05□□□□□ -0.48
RABGAP1-201ENST00000317419 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
RABGAP1-201ENST00000317419 SPACA4Q8TDM5 124 aa12.04□□□□□ -0.48
RABGAP1-201ENST00000317419 LITAFQ99732 161 aa12.04□□□□□ -0.48
RABGAP1-201ENST00000317419 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
RABGAP1-201ENST00000317419 LINC00474Q9P2X8 69 aa12.03□□□□□ -0.48
RABGAP1-201ENST00000317419 CHTF8P0CG12 524 aa12.03□□□□□ -0.48
RABGAP1-201ENST00000317419 LINC00158P58513 81 aa12.02□□□□□ -0.48
RABGAP1-201ENST00000317419 EPM2AB3EWF7 344 aa12.02□□□□□ -0.49
RABGAP1-201ENST00000317419 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.49
RABGAP1-201ENST00000317419 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
RABGAP1-201ENST00000317419 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
RABGAP1-201ENST00000317419 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
RABGAP1-201ENST00000317419 IGKV2-24A0A0C4DH68 120 aa12□□□□□ -0.49
RABGAP1-201ENST00000317419 S100A12P80511 92 aa12□□□□□ -0.49
RABGAP1-201ENST00000317419 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
RABGAP1-201ENST00000317419 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
RABGAP1-201ENST00000317419 MIR7-3HGQ8N6C7 128 aa11.99□□□□□ -0.49
RABGAP1-201ENST00000317419 C14orf144Q96I85 54 aa11.99□□□□□ -0.49
RABGAP1-201ENST00000317419 LOC107984156A0A0G2JMH3 177 aa11.99□□□□□ -0.49
RABGAP1-201ENST00000317419 A0A0U1RRA0 63 aa11.99□□□□□ -0.49
RABGAP1-201ENST00000317419 ARL17AQ8IVW1 177 aa11.99□□□□□ -0.49
RABGAP1-201ENST00000317419 SCGB1D4Q6XE38 83 aa11.98□□□□□ -0.49
RABGAP1-201ENST00000317419 XAGE1AQ9HD64 81 aa11.98□□□□□ -0.49
RABGAP1-201ENST00000317419 TP73-AS1Q9UF72 201 aa11.98□□□□□ -0.49
RABGAP1-201ENST00000317419 PLA2G2DQ9UNK4 145 aa11.98□□□□□ -0.49
RABGAP1-201ENST00000317419 SLC25A34Q6PIV7 304 aa11.96□□□□□ -0.49
RABGAP1-201ENST00000317419 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
RABGAP1-201ENST00000317419 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
RABGAP1-201ENST00000317419 PLAC8Q9NZF1 115 aa11.96□□□□□ -0.49
RABGAP1-201ENST00000317419 KRTAP7-1Q8IUC3 87 aa11.96□□□□□ -0.5
RABGAP1-201ENST00000317419 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms