RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 WFDC10AQ9H1F0 79 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 NBEAL2Q6ZNJ1 2754 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 LRP1BQ9NZR2 4599 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 ACANP16112 2415 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 J3KRW8 73 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 ZNF415Q09FC8 603 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 DAND5Q8N907 189 aa5.23□□□□□ -1.57
CNOT4-201ENST00000315544 IGLV6-57P01721 117 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 RNF151Q2KHN1 245 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 DUX3Q96PT4 197 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 JMJD1CQ15652 2540 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 B9D2Q9BPU9 175 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 LCE6AA0A183 80 aa5.22□□□□□ -1.57
CNOT4-201ENST00000315544 TRBV6-8A0A0A6YYG3 113 aa5.21□□□□□ -1.57
CNOT4-201ENST00000315544 A0A0J9YWU9 116 aa5.21□□□□□ -1.57
CNOT4-201ENST00000315544 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.57
CNOT4-201ENST00000315544 HERVK_113P63121 156 aa5.21□□□□□ -1.57
CNOT4-201ENST00000315544 PAX4O43316 350 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 NDUFC2O95298 119 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 CCL18P55774 89 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 C9orf66Q5T8R8 295 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 PEMTQ9UBM1 199 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 CXCL5P42830 114 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 PSMB2P49721 201 aa5.21□□□□□ -1.58
CNOT4-201ENST00000315544 ATXN8Q156A1 80 aa5.2□□□□□ -1.58
CNOT4-201ENST00000315544 SETD2Q9BYW2 2564 aaPredicted RBP5.2□□□□□ -1.58
CNOT4-201ENST00000315544 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
CNOT4-201ENST00000315544 Q8N3U1 123 aa5.2□□□□□ -1.58
CNOT4-201ENST00000315544 VPS25Q9BRG1 176 aa5.2□□□□□ -1.58
CNOT4-201ENST00000315544 LINC00959A0A1B0GUT2 108 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 C15orf53Q8NAA6 179 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 NTN5Q8WTR8 489 aaPredicted RBP5.19□□□□□ -1.58
CNOT4-201ENST00000315544 Q8IZM0 81 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 SMIM11BQ8TCY0 68 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 HERV-K104P63124 156 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 TNP2Q05952 138 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 C16orf74Q96GX8 76 aa5.19□□□□□ -1.58
CNOT4-201ENST00000315544 INSP01308 110 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 ZNF56Q15929 161 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 TMEM170BQ5T4T1 132 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 IBA57-AS1B1ANH7 110 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 C9JAW5 83 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 IGHV3-38A0A0C4DH36 116 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 TRBV7-6A0A0J9YX20 115 aa5.18□□□□□ -1.58
CNOT4-201ENST00000315544 IGHV3-73A0A0B4J1V6 119 aa5.17□□□□□ -1.58
CNOT4-201ENST00000315544 M0R2N4 97 aa5.17□□□□□ -1.58
CNOT4-201ENST00000315544 CCL24O00175 119 aa5.17□□□□□ -1.58
CNOT4-201ENST00000315544 LOC110117498A0A087WWA1 95 aa5.16□□□□□ -1.58
CNOT4-201ENST00000315544 FAM74A4Q5TZK3 123 aa5.16□□□□□ -1.58
CNOT4-201ENST00000315544 GEMIN7Q9H840 131 aaKnown RBP5.16□□□□□ -1.58
CNOT4-201ENST00000315544 S100A4P26447 101 aaKnown RBP5.16□□□□□ -1.58
CNOT4-201ENST00000315544 HERVK_113P61574 105 aa5.16□□□□□ -1.58
CNOT4-201ENST00000315544 ENHOQ6UWT2 76 aa5.16□□□□□ -1.58
CNOT4-201ENST00000315544 TIMM8BQ9Y5J9 83 aaPredicted RBP5.16□□□□□ -1.58
CNOT4-201ENST00000315544 CKS1BP61024 79 aa5.16□□□□□ -1.58
CNOT4-201ENST00000315544 IGHV3-64A0A075B6Q5 118 aa5.15□□□□□ -1.58
CNOT4-201ENST00000315544 CRYGAP11844 174 aa5.15□□□□□ -1.58
CNOT4-201ENST00000315544 LGALS3P17931 250 aaKnown RBP5.15□□□□□ -1.58
CNOT4-201ENST00000315544 CFAP161Q6P656 301 aa5.15□□□□□ -1.58
CNOT4-201ENST00000315544 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.59
CNOT4-201ENST00000315544 COX17Q14061 63 aa5.15□□□□□ -1.59
CNOT4-201ENST00000315544 C11orf68Q9H3H3 251 aaKnown RBP5.15□□□□□ -1.59
CNOT4-201ENST00000315544 C6orf223Q8N319 242 aa5.14□□□□□ -1.59
CNOT4-201ENST00000315544 UBE2WQ96B02 151 aa5.14□□□□□ -1.59
CNOT4-201ENST00000315544 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
CNOT4-201ENST00000315544 FAT1Q14517 4588 aa5.14□□□□□ -1.59
CNOT4-201ENST00000315544 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 TNFRSF18Q9Y5U5 241 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 SPRR1AP35321 89 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 IGKV3-7A0A075B6H7 116 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 SLPIP03973 132 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 COX7B2Q8TF08 81 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 SORL1Q92673 2214 aa5.13□□□□□ -1.59
CNOT4-201ENST00000315544 ACYP1P07311 99 aa5.12□□□□□ -1.59
CNOT4-201ENST00000315544 SFTA2Q6UW10 78 aa5.12□□□□□ -1.59
CNOT4-201ENST00000315544 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
CNOT4-201ENST00000315544 RYR1P21817 5038 aa5.12□□□□□ -1.59
CNOT4-201ENST00000315544 Q6ZQT0 140 aa5.12□□□□□ -1.59
CNOT4-201ENST00000315544 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
CNOT4-201ENST00000315544 H3BNG1 76 aa5.11□□□□□ -1.59
CNOT4-201ENST00000315544 NBEAL1Q6ZS30 2694 aa5.11□□□□□ -1.59
CNOT4-201ENST00000315544 LINC00526Q96FQ7 95 aa5.11□□□□□ -1.59
CNOT4-201ENST00000315544 NOP10Q9NPE3 64 aaKnown RBP5.11□□□□□ -1.59
CNOT4-201ENST00000315544 Q5XG85 94 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 SCGB1D4Q6XE38 83 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 XCL2Q9UBD3 114 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 SMIM9A6NGZ8 99 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 MALP21145 153 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 Q6JHZ5 121 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 Q8N814 137 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 C3orf56Q8N813 242 aa5.1□□□□□ -1.59
CNOT4-201ENST00000315544 A0A096LPF7 62 aa5.09□□□□□ -1.59
CNOT4-201ENST00000315544 MIR7-3HGQ8N6C7 128 aa5.09□□□□□ -1.59
CNOT4-201ENST00000315544 C2CD3Q4AC94 2353 aa5.09□□□□□ -1.59
CNOT4-201ENST00000315544 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
CNOT4-201ENST00000315544 MUC7Q8TAX7 377 aa5.09□□□□□ -1.59
CNOT4-201ENST00000315544 LINC00575Q6W349 94 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms