RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 OR13C6PQ8NH95 151 aa13.38□□□□□ -0.27
HERPUD2-201ENST00000311350 TRAV25A0A0B4J276 109 aa13.38□□□□□ -0.27
HERPUD2-201ENST00000311350 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
HERPUD2-201ENST00000311350 C4orf26Q17RF5 130 aa13.37□□□□□ -0.27
HERPUD2-201ENST00000311350 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
HERPUD2-201ENST00000311350 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
HERPUD2-201ENST00000311350 RPL28P46779 137 aaKnown RBP13.36□□□□□ -0.27
HERPUD2-201ENST00000311350 SERP2Q8N6R1 65 aa13.35□□□□□ -0.27
HERPUD2-201ENST00000311350 F5H768 121 aa13.35□□□□□ -0.27
HERPUD2-201ENST00000311350 NCR3O14931 201 aa13.35□□□□□ -0.27
HERPUD2-201ENST00000311350 SLPIP03973 132 aa13.34□□□□□ -0.27
HERPUD2-201ENST00000311350 SMIM11BQ8TCY0 68 aa13.34□□□□□ -0.27
HERPUD2-201ENST00000311350 ESM1Q9NQ30 184 aa13.34□□□□□ -0.27
HERPUD2-201ENST00000311350 USP17L23D6RBM5 183 aa13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 CRPP02741 224 aa13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 TMEM258P61165 79 aa13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 MIR7-3HGQ8N6C7 128 aa13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
HERPUD2-201ENST00000311350 Q6JHZ5 121 aa13.32□□□□□ -0.28
HERPUD2-201ENST00000311350 K7EQD1 137 aa13.32□□□□□ -0.28
HERPUD2-201ENST00000311350 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
HERPUD2-201ENST00000311350 HRCT1Q6UXD1 115 aa13.31□□□□□ -0.28
HERPUD2-201ENST00000311350 C1orf158Q8N1D5 194 aa13.31□□□□□ -0.28
HERPUD2-201ENST00000311350 TMEM86BQ8N661 226 aa13.31□□□□□ -0.28
HERPUD2-201ENST00000311350 WFDC9Q8NEX5 89 aa13.31□□□□□ -0.28
HERPUD2-201ENST00000311350 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
HERPUD2-201ENST00000311350 NTM-AS1Q6ZSK4 140 aa13.3□□□□□ -0.28
HERPUD2-201ENST00000311350 SND1-IT1Q9HBX3 110 aa13.3□□□□□ -0.28
HERPUD2-201ENST00000311350 LECT2O14960 151 aa13.3□□□□□ -0.28
HERPUD2-201ENST00000311350 DNAJC9-AS1A6NH13 148 aa13.29□□□□□ -0.28
HERPUD2-201ENST00000311350 STHQ8IWL8 128 aa13.29□□□□□ -0.28
HERPUD2-201ENST00000311350 Q5XG85 94 aa13.29□□□□□ -0.28
HERPUD2-201ENST00000311350 FHL2Q14192 279 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 OBSCN-AS1Q96MR7 158 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 CDC42SE2Q9NRR3 84 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 TRGV1A0A0A0MS02 117 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 TOMM7Q9P0U1 55 aa13.28□□□□□ -0.28
HERPUD2-201ENST00000311350 ANK2Q01484 3957 aa13.27□□□□□ -0.29
HERPUD2-201ENST00000311350 WIPF1O43516 503 aa13.25□□□□□ -0.29
HERPUD2-201ENST00000311350 KHDC1LQ5JSQ8 128 aa13.25□□□□□ -0.29
HERPUD2-201ENST00000311350 PF4P02776 101 aa13.25□□□□□ -0.29
HERPUD2-201ENST00000311350 RNASE1P07998 156 aaKnown RBP13.24□□□□□ -0.29
HERPUD2-201ENST00000311350 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
HERPUD2-201ENST00000311350 LINC00158P58513 81 aa13.24□□□□□ -0.29
HERPUD2-201ENST00000311350 CCL18P55774 89 aa13.24□□□□□ -0.29
HERPUD2-201ENST00000311350 IGKV3OR2-268A0A0C4DH90 116 aa13.23□□□□□ -0.29
HERPUD2-201ENST00000311350 SS18Q15532 418 aa13.23□□□□□ -0.29
HERPUD2-201ENST00000311350 TMEM243Q9BU79 118 aa13.22□□□□□ -0.29
HERPUD2-201ENST00000311350 TRAV23DV6A0A075B6W5 121 aa13.21□□□□□ -0.29
HERPUD2-201ENST00000311350 Q6ZTI0 123 aa13.21□□□□□ -0.29
HERPUD2-201ENST00000311350 COX7B2Q8TF08 81 aa13.21□□□□□ -0.29
HERPUD2-201ENST00000311350 FBN3Q75N90 2809 aa13.21□□□□□ -0.29
HERPUD2-201ENST00000311350 PFN2P35080 140 aa13.2□□□□□ -0.3
HERPUD2-201ENST00000311350 FAM19A1Q7Z5A9 133 aa13.2□□□□□ -0.3
HERPUD2-201ENST00000311350 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
HERPUD2-201ENST00000311350 TENM1Q9UKZ4 2725 aa13.2□□□□□ -0.3
HERPUD2-201ENST00000311350 H0YGX0 51 aa13.19□□□□□ -0.3
HERPUD2-201ENST00000311350 UBE2L6O14933 153 aa13.19□□□□□ -0.3
HERPUD2-201ENST00000311350 GHRHP01286 108 aa13.19□□□□□ -0.3
HERPUD2-201ENST00000311350 NOTCH3Q9UM47 2321 aa13.18□□□□□ -0.3
HERPUD2-201ENST00000311350 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
HERPUD2-201ENST00000311350 TRBV6-4A0A1B0GX49 114 aa13.18□□□□□ -0.3
HERPUD2-201ENST00000311350 PAX4O43316 350 aa13.17□□□□□ -0.3
HERPUD2-201ENST00000311350 CCL24O00175 119 aa13.16□□□□□ -0.3
HERPUD2-201ENST00000311350 CCKP06307 115 aa13.16□□□□□ -0.3
HERPUD2-201ENST00000311350 ENHOQ6UWT2 76 aa13.16□□□□□ -0.3
HERPUD2-201ENST00000311350 NOP10Q9NPE3 64 aaKnown RBP13.15□□□□□ -0.3
HERPUD2-201ENST00000311350 C20orf197Q8N268 126 aa13.14□□□□□ -0.31
HERPUD2-201ENST00000311350 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
HERPUD2-201ENST00000311350 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
HERPUD2-201ENST00000311350 ORMDL1Q9P0S3 153 aa13.14□□□□□ -0.31
HERPUD2-201ENST00000311350 GIG44P09565 113 aaPredicted RBP13.13□□□□□ -0.31
HERPUD2-201ENST00000311350 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
HERPUD2-201ENST00000311350 PRR3P79522 188 aaKnown RBP13.11□□□□□ -0.31
HERPUD2-201ENST00000311350 IGLV4-60A0A075B6I1 120 aa13.1□□□□□ -0.31
HERPUD2-201ENST00000311350 IBA57-AS1B1ANH7 110 aa13.09□□□□□ -0.31
HERPUD2-201ENST00000311350 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.31
HERPUD2-201ENST00000311350 IGHV3OR16-9A0A0B4J2B5 98 aa13.07□□□□□ -0.32
HERPUD2-201ENST00000311350 XCL1P47992 114 aa13.07□□□□□ -0.32
HERPUD2-201ENST00000311350 TRBV6-8A0A0A6YYG3 113 aa13.07□□□□□ -0.32
HERPUD2-201ENST00000311350 A0A087WZ39 114 aa13.06□□□□□ -0.32
HERPUD2-201ENST00000311350 NDUFC2O95298 119 aa13.06□□□□□ -0.32
HERPUD2-201ENST00000311350 CSNK1G2-AS1Q8NCQ2 148 aa13.06□□□□□ -0.32
HERPUD2-201ENST00000311350 C19orf73Q9NVV2 129 aa13.06□□□□□ -0.32
HERPUD2-201ENST00000311350 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
HERPUD2-201ENST00000311350 LINC01006Q8NI28 216 aa13.05□□□□□ -0.32
HERPUD2-201ENST00000311350 A0A1W2PRX2 142 aa13.05□□□□□ -0.32
HERPUD2-201ENST00000311350 FAM236DA0A1B0GTK5 79 aa13.04□□□□□ -0.32
HERPUD2-201ENST00000311350 FAM236CP0DP71 79 aa13.04□□□□□ -0.32
HERPUD2-201ENST00000311350 C16orf95Q9H693 158 aa13.04□□□□□ -0.32
HERPUD2-201ENST00000311350 IGLV1-51P01701 117 aa13.04□□□□□ -0.32
HERPUD2-201ENST00000311350 NANOS2P60321 138 aaKnown RBP13.03□□□□□ -0.32
HERPUD2-201ENST00000311350 Q8N814 137 aa13.03□□□□□ -0.32
HERPUD2-201ENST00000311350 NBEAL1Q6ZS30 2694 aa13.02□□□□□ -0.32
HERPUD2-201ENST00000311350 LYPD5Q6UWN5 251 aa13.02□□□□□ -0.32
HERPUD2-201ENST00000311350 NDUFC2-KCTD14E9PQ53 114 aa13.02□□□□□ -0.33
HERPUD2-201ENST00000311350 S100A7L2Q5SY68 101 aa13.02□□□□□ -0.33
HERPUD2-201ENST00000311350 H7BZZ5 65 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 813.1 ms