RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 PMCHL2Q9BQD1 86 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 LINC00588Q9Y4M8 146 aa5.68□□□□□ -1.5
CHD6-201ENST00000309279 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
CHD6-201ENST00000309279 H3BUT2 72 aa5.67□□□□□ -1.5
CHD6-201ENST00000309279 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
CHD6-201ENST00000309279 SPANXN1Q5VSR9 72 aa5.67□□□□□ -1.5
CHD6-201ENST00000309279 TRBV6-4A0A1B0GX49 114 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 K7ERJ3 54 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 Q8N976 141 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 CHCHD5Q9BSY4 110 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 A0A0J9YY99 117 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 SMIM27A0A1W2PRY6 76 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 SCGB1C2P0DMR2 95 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 SLC25A29Q8N8R3 303 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 KIF25-AS1Q9Y6Z4 181 aa5.66□□□□□ -1.5
CHD6-201ENST00000309279 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 K7EQD1 137 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 LINC00315P59091 139 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 MRPS36P82909 103 aaKnown RBP5.65□□□□□ -1.51
CHD6-201ENST00000309279 Q6ZSN1 163 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 SH2D6Q7Z4S9 175 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 NKAPP1Q8N9T2 125 aa5.65□□□□□ -1.51
CHD6-201ENST00000309279 A0A096LPF7 62 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 A0A1B0GUT8 65 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 RHOHQ15669 191 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 FAM74A4Q5TZK3 123 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 C14orf178Q8N769 122 aaPredicted RBP5.64□□□□□ -1.51
CHD6-201ENST00000309279 LINC00476Q8WZB0 136 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 URB1-AS1Q96HZ7 61 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
CHD6-201ENST00000309279 TRAV9-2A0A087WT02 112 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 LCE6AA0A183 80 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 HLA-DQA1P01909 254 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 UBE2BP63146 152 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 TWIST1Q15672 202 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 ICOSQ9Y6W8 199 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 TRBV10-1A0A0K0K1A3 114 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 HBDP02042 147 aa5.63□□□□□ -1.51
CHD6-201ENST00000309279 RYR3Q15413 4870 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 TSHBP01222 138 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 IGKCP01834 107 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 ESRGQ1W209 222 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 LINC01554Q52M75 96 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 SPATA12Q7Z6I5 190 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
CHD6-201ENST00000309279 ALMS1Q8TCU4 4167 aa5.62□□□□□ -1.51
CHD6-201ENST00000309279 RYR2Q92736 4967 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 M0QY20 66 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 CCL18P55774 89 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 SS18Q15532 418 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 ZNF56Q15929 161 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 LYPD5Q6UWN5 251 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 AMN1Q8IY45 258 aa5.61□□□□□ -1.51
CHD6-201ENST00000309279 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
CHD6-201ENST00000309279 hADV29S1A0JD25 119 aa5.6□□□□□ -1.51
CHD6-201ENST00000309279 LY6G6CO95867 125 aa5.6□□□□□ -1.51
CHD6-201ENST00000309279 UPK3BQ9BT76 320 aa5.6□□□□□ -1.51
CHD6-201ENST00000309279 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
CHD6-201ENST00000309279 NUPR1O60356 82 aa5.59□□□□□ -1.51
CHD6-201ENST00000309279 CXCL6P80162 114 aa5.59□□□□□ -1.51
CHD6-201ENST00000309279 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
CHD6-201ENST00000309279 C7orf65Q6ZTY9 151 aa5.59□□□□□ -1.51
CHD6-201ENST00000309279 MGPP08493 103 aa5.59□□□□□ -1.52
CHD6-201ENST00000309279 UBE2D3P61077 147 aa5.59□□□□□ -1.52
CHD6-201ENST00000309279 UBE2D2P62837 147 aa5.59□□□□□ -1.52
CHD6-201ENST00000309279 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.52
CHD6-201ENST00000309279 DIRC1Q969H9 104 aa5.59□□□□□ -1.52
CHD6-201ENST00000309279 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.52
CHD6-201ENST00000309279 ADAMTSL4-AS1Q5T5F5 129 aa5.58□□□□□ -1.52
CHD6-201ENST00000309279 UBE2DNLQ8IWF7 75 aa5.58□□□□□ -1.52
CHD6-201ENST00000309279 FAM104BQ5XKR9 115 aa5.57□□□□□ -1.52
CHD6-201ENST00000309279 SCXQ7RTU7 201 aa5.57□□□□□ -1.52
CHD6-201ENST00000309279 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
CHD6-201ENST00000309279 IGLV5-52A0A0A0MRZ9 124 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 ATOX1O00244 68 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 LELP1Q5T871 98 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 NFE4Q86UQ8 179 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 CEND1Q8N111 149 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 TRBV6-5A0A0K0K1A5 114 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 TIMM17BO60830 172 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 GAS8-AS1O95177 125 aa5.56□□□□□ -1.52
CHD6-201ENST00000309279 PPP1R17O96001 155 aa5.55□□□□□ -1.52
CHD6-201ENST00000309279 MRPL51Q4U2R6 128 aaKnown RBP5.55□□□□□ -1.52
CHD6-201ENST00000309279 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
CHD6-201ENST00000309279 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
CHD6-201ENST00000309279 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms