RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 PACRGQ96M98 296 aaPredicted RBP12.98□□□□□ -0.33
MRPL39-201ENST00000307301 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 OXTP01178 125 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 PMVKQ15126 192 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 Q8IZM0 81 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 SLC7A5P1Q8MH63 180 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
MRPL39-201ENST00000307301 PMCHL1Q16048 86 aa12.96□□□□□ -0.33
MRPL39-201ENST00000307301 C6orf226Q5I0X4 101 aa12.96□□□□□ -0.33
MRPL39-201ENST00000307301 CBLN2Q8IUK8 224 aa12.96□□□□□ -0.33
MRPL39-201ENST00000307301 CKS1BP61024 79 aa12.95□□□□□ -0.34
MRPL39-201ENST00000307301 GAGE2EQ4V326 116 aa12.95□□□□□ -0.34
MRPL39-201ENST00000307301 GAGE2DQ9UEU5 116 aa12.95□□□□□ -0.34
MRPL39-201ENST00000307301 IGLV5-45A0A087WSX0 123 aa12.94□□□□□ -0.34
MRPL39-201ENST00000307301 SMIM1B2RUZ4 78 aa12.94□□□□□ -0.34
MRPL39-201ENST00000307301 HBDP02042 147 aa12.94□□□□□ -0.34
MRPL39-201ENST00000307301 HERC1Q15751 4861 aa12.94□□□□□ -0.34
MRPL39-201ENST00000307301 FAM168BA1KXE4 195 aa12.93□□□□□ -0.34
MRPL39-201ENST00000307301 RAB5BP61020 215 aa12.93□□□□□ -0.34
MRPL39-201ENST00000307301 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
MRPL39-201ENST00000307301 NDUFC2-KCTD14E9PQ53 114 aa12.92□□□□□ -0.34
MRPL39-201ENST00000307301 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
MRPL39-201ENST00000307301 NDUFA6P56556 154 aa12.91□□□□□ -0.34
MRPL39-201ENST00000307301 PDZD11Q5EBL8 140 aa12.91□□□□□ -0.34
MRPL39-201ENST00000307301 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
MRPL39-201ENST00000307301 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
MRPL39-201ENST00000307301 FAT3Q8TDW7 4589 aa12.88□□□□□ -0.35
MRPL39-201ENST00000307301 F8VRH5 84 aa12.88□□□□□ -0.35
MRPL39-201ENST00000307301 IGLC3P0DOY3 106 aa12.88□□□□□ -0.35
MRPL39-201ENST00000307301 C9orf129Q5T035 196 aaKnown RBP12.88□□□□□ -0.35
MRPL39-201ENST00000307301 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
MRPL39-201ENST00000307301 ATP5LO75964 103 aa12.87□□□□□ -0.35
MRPL39-201ENST00000307301 CXCL5P42830 114 aa12.87□□□□□ -0.35
MRPL39-201ENST00000307301 KRTAP7-1Q8IUC3 87 aa12.87□□□□□ -0.35
MRPL39-201ENST00000307301 PSORS1C2Q9UIG4 136 aa12.86□□□□□ -0.35
MRPL39-201ENST00000307301 H3BRM9 83 aa12.85□□□□□ -0.35
MRPL39-201ENST00000307301 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
MRPL39-201ENST00000307301 TRGC2P03986 189 aa12.83□□□□□ -0.36
MRPL39-201ENST00000307301 ZNF22P17026 224 aaPredicted RBP12.83□□□□□ -0.36
MRPL39-201ENST00000307301 BAGE3Q86Y29 109 aa12.83□□□□□ -0.36
MRPL39-201ENST00000307301 M0QXV9 152 aa12.82□□□□□ -0.36
MRPL39-201ENST00000307301 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
MRPL39-201ENST00000307301 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
MRPL39-201ENST00000307301 KRTAP11-1Q8IUC1 163 aa12.82□□□□□ -0.36
MRPL39-201ENST00000307301 MT1HL1P0DM35 61 aa12.81□□□□□ -0.36
MRPL39-201ENST00000307301 C1orf137Q5JT78 98 aa12.81□□□□□ -0.36
MRPL39-201ENST00000307301 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
MRPL39-201ENST00000307301 IGLV5-39A0A0G2JS06 123 aa12.8□□□□□ -0.36
MRPL39-201ENST00000307301 C11orf86A6NJI1 115 aa12.8□□□□□ -0.36
MRPL39-201ENST00000307301 SERTAD4-AS1Q5TG53 156 aa12.79□□□□□ -0.36
MRPL39-201ENST00000307301 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
MRPL39-201ENST00000307301 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
MRPL39-201ENST00000307301 CHTOPQ9Y3Y2 248 aaKnown RBP12.78□□□□□ -0.36
MRPL39-201ENST00000307301 COLCA2A8K830 154 aa12.77□□□□□ -0.37
MRPL39-201ENST00000307301 HSBP1O75506 76 aa12.77□□□□□ -0.37
MRPL39-201ENST00000307301 TMEM170BQ5T4T1 132 aa12.77□□□□□ -0.37
MRPL39-201ENST00000307301 UBE2BP63146 152 aa12.76□□□□□ -0.37
MRPL39-201ENST00000307301 LINC01600Q96MT4 127 aa12.75□□□□□ -0.37
MRPL39-201ENST00000307301 TRAV12-1A0A0B4J245 112 aa12.74□□□□□ -0.37
MRPL39-201ENST00000307301 LINC00310P59036 64 aa12.74□□□□□ -0.37
MRPL39-201ENST00000307301 REG3GQ6UW15 175 aa12.74□□□□□ -0.37
MRPL39-201ENST00000307301 C22orf24Q9Y442 160 aa12.74□□□□□ -0.37
MRPL39-201ENST00000307301 SERF1AO75920 110 aa12.73□□□□□ -0.37
MRPL39-201ENST00000307301 IGLV7-43P04211 117 aa12.73□□□□□ -0.37
MRPL39-201ENST00000307301 PFN2P35080 140 aa12.7□□□□□ -0.38
MRPL39-201ENST00000307301 NUPR1O60356 82 aa12.69□□□□□ -0.38
MRPL39-201ENST00000307301 SCO1O75880 301 aa12.69□□□□□ -0.38
MRPL39-201ENST00000307301 TMEM223A0PJW6 202 aa12.68□□□□□ -0.38
MRPL39-201ENST00000307301 LBHQ53QV2 105 aaPredicted RBP12.68□□□□□ -0.38
MRPL39-201ENST00000307301 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
MRPL39-201ENST00000307301 TP73-AS1Q9UF72 201 aa12.68□□□□□ -0.38
MRPL39-201ENST00000307301 ERG28Q9UKR5 140 aa12.68□□□□□ -0.38
MRPL39-201ENST00000307301 PLA2G2DQ9UNK4 145 aa12.68□□□□□ -0.38
MRPL39-201ENST00000307301 H0Y8G0 127 aa12.67□□□□□ -0.38
MRPL39-201ENST00000307301 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
MRPL39-201ENST00000307301 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
MRPL39-201ENST00000307301 ODF1Q14990 250 aa12.66□□□□□ -0.38
MRPL39-201ENST00000307301 DIRC1Q969H9 104 aa12.65□□□□□ -0.38
MRPL39-201ENST00000307301 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
MRPL39-201ENST00000307301 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 FABP4P15090 132 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 KRTAP10-8P60410 259 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 COX17Q14061 63 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
MRPL39-201ENST00000307301 H0Y9J4 135 aa12.62□□□□□ -0.39
MRPL39-201ENST00000307301 GAGE10A6NGK3 116 aa12.61□□□□□ -0.39
MRPL39-201ENST00000307301 RPL37AP8A6NKH3 93 aa12.61□□□□□ -0.39
MRPL39-201ENST00000307301 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
MRPL39-201ENST00000307301 HSPB8Q9UJY1 196 aa12.61□□□□□ -0.39
MRPL39-201ENST00000307301 TNXBP22105 4242 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
MRPL39-201ENST00000307301 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms