RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CXCL5P42830 114 aa10.58□□□□□ -0.72
HERPUD1-201ENST00000300302 CKS1BP61024 79 aa10.58□□□□□ -0.72
HERPUD1-201ENST00000300302 STAB2Q8WWQ8 2551 aa10.58□□□□□ -0.72
HERPUD1-201ENST00000300302 UBE2V1Q13404 147 aa10.57□□□□□ -0.72
HERPUD1-201ENST00000300302 VAMP3Q15836 100 aa10.57□□□□□ -0.72
HERPUD1-201ENST00000300302 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
HERPUD1-201ENST00000300302 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-201ENST00000300302 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.56□□□□□ -0.72
HERPUD1-201ENST00000300302 A4D1N5 150 aa10.56□□□□□ -0.72
HERPUD1-201ENST00000300302 APLNQ9ULZ1 77 aa10.56□□□□□ -0.72
HERPUD1-201ENST00000300302 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 IBA57-AS1B1ANH7 110 aa10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 H3BUT2 72 aa10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 DAND5Q8N907 189 aa10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
HERPUD1-201ENST00000300302 NPC2P61916 151 aa10.54□□□□□ -0.72
HERPUD1-201ENST00000300302 SPAG11BQ08648 103 aa10.54□□□□□ -0.72
HERPUD1-201ENST00000300302 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 CFC1BP0CG36 223 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 CFC1P0CG37 223 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 LINC00158P58513 81 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 KRTAP26-1Q6PEX3 210 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
HERPUD1-201ENST00000300302 A0A1W2PPM0 123 aa10.52□□□□□ -0.73
HERPUD1-201ENST00000300302 PPDPFQ9H3Y8 114 aa10.52□□□□□ -0.73
HERPUD1-201ENST00000300302 Q9HAA7 133 aa10.52□□□□□ -0.73
HERPUD1-201ENST00000300302 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
HERPUD1-201ENST00000300302 PFN2P35080 140 aa10.51□□□□□ -0.73
HERPUD1-201ENST00000300302 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
HERPUD1-201ENST00000300302 RMI2Q96E14 147 aa10.51□□□□□ -0.73
HERPUD1-201ENST00000300302 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
HERPUD1-201ENST00000300302 COX17Q14061 63 aa10.5□□□□□ -0.73
HERPUD1-201ENST00000300302 PGPEP1Q9NXJ5 209 aa10.49□□□□□ -0.73
HERPUD1-201ENST00000300302 ZNF561-AS1K7EIQ3 104 aa10.49□□□□□ -0.73
HERPUD1-201ENST00000300302 K7EP34 96 aa10.48□□□□□ -0.73
HERPUD1-201ENST00000300302 FABP2P12104 132 aa10.48□□□□□ -0.73
HERPUD1-201ENST00000300302 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
HERPUD1-201ENST00000300302 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-201ENST00000300302 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
HERPUD1-201ENST00000300302 GAGE10A6NGK3 116 aa10.47□□□□□ -0.73
HERPUD1-201ENST00000300302 SOSTDC1Q6X4U4 206 aa10.47□□□□□ -0.73
HERPUD1-201ENST00000300302 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
HERPUD1-201ENST00000300302 UNQ6190/PRO20217Q6UXQ8 127 aa10.46□□□□□ -0.74
HERPUD1-201ENST00000300302 DYNC2H1Q8NCM8 4307 aaKnown RBP10.46□□□□□ -0.74
HERPUD1-201ENST00000300302 TSPAN13O95857 204 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 GTF2H5Q6ZYL4 71 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 C15orf56Q8N910 161 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 SPCS1Q9Y6A9 102 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 DNAH7Q8WXX0 4024 aa10.45□□□□□ -0.74
HERPUD1-201ENST00000300302 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
HERPUD1-201ENST00000300302 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
HERPUD1-201ENST00000300302 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
HERPUD1-201ENST00000300302 F8WDY8 70 aa10.44□□□□□ -0.74
HERPUD1-201ENST00000300302 CAMK2N2Q96S95 79 aa10.44□□□□□ -0.74
HERPUD1-201ENST00000300302 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
HERPUD1-201ENST00000300302 C2orf48Q96LS8 159 aa10.43□□□□□ -0.74
HERPUD1-201ENST00000300302 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
HERPUD1-201ENST00000300302 Q1RN00 199 aa10.42□□□□□ -0.74
HERPUD1-201ENST00000300302 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
HERPUD1-201ENST00000300302 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
HERPUD1-201ENST00000300302 LYRM7Q5U5X0 104 aa10.42□□□□□ -0.74
HERPUD1-201ENST00000300302 H7C2G1 150 aa10.41□□□□□ -0.74
HERPUD1-201ENST00000300302 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
HERPUD1-201ENST00000300302 LOC107984156A0A0G2JMH3 177 aa10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 PSMB2P49721 201 aa10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 TTC32Q5I0X7 151 aa10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 ARL17AQ8IVW1 177 aa10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 C6orf48Q9UBA6 75 aa10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 PLECQ15149 4684 aaKnown RBP10.4□□□□□ -0.75
HERPUD1-201ENST00000300302 RPL13AP40429 203 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-201ENST00000300302 CSMD3Q7Z407 3707 aa10.39□□□□□ -0.75
HERPUD1-201ENST00000300302 TRAV13-2A0A0B4J235 113 aa10.38□□□□□ -0.75
HERPUD1-201ENST00000300302 KRTAP1-5Q9BYS1 174 aa10.38□□□□□ -0.75
HERPUD1-201ENST00000300302 USP17L23D6RBM5 183 aa10.38□□□□□ -0.75
HERPUD1-201ENST00000300302 SCGB1C2P0DMR2 95 aa10.37□□□□□ -0.75
HERPUD1-201ENST00000300302 Q6ZRU5 148 aa10.37□□□□□ -0.75
HERPUD1-201ENST00000300302 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
HERPUD1-201ENST00000300302 CASC10Q5T4H9 136 aa10.36□□□□□ -0.75
HERPUD1-201ENST00000300302 NBDYA0A0U1RRE5 68 aa10.35□□□□□ -0.75
HERPUD1-201ENST00000300302 PSCAO43653 123 aa10.35□□□□□ -0.75
HERPUD1-201ENST00000300302 NDUFC2O95298 119 aa10.35□□□□□ -0.75
HERPUD1-201ENST00000300302 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 COX6CP09669 75 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 WWC2-AS2Q96NR7 200 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 LYSTQ99698 3801 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
HERPUD1-201ENST00000300302 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
HERPUD1-201ENST00000300302 CARD19Q96LW7 228 aa10.33□□□□□ -0.76
HERPUD1-201ENST00000300302 NDUFC2-KCTD14E9PQ53 114 aa10.32□□□□□ -0.76
HERPUD1-201ENST00000300302 TRIAP1O43715 76 aa10.32□□□□□ -0.76
HERPUD1-201ENST00000300302 RNF151Q2KHN1 245 aa10.32□□□□□ -0.76
HERPUD1-201ENST00000300302 H3BMG7 143 aa10.32□□□□□ -0.76
HERPUD1-201ENST00000300302 LECT2O14960 151 aa10.3□□□□□ -0.76
HERPUD1-201ENST00000300302 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms