RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 TRAV8-3A0A0A6YYJ7 113 aa16.68■□□□□ 0.26
SHISA5-201ENST00000296444 TRAV13-1A0A0B4J241 112 aa16.68■□□□□ 0.26
SHISA5-201ENST00000296444 CHCHD5Q9BSY4 110 aa16.68■□□□□ 0.26
SHISA5-201ENST00000296444 NANOS2P60321 138 aaKnown RBP16.67■□□□□ 0.26
SHISA5-201ENST00000296444 SPANXDQ9BXN6 97 aa16.67■□□□□ 0.26
SHISA5-201ENST00000296444 SPANXCQ9NY87 97 aa16.67■□□□□ 0.26
SHISA5-201ENST00000296444 PRKDCP78527 4128 aaKnown RBP16.67■□□□□ 0.26
SHISA5-201ENST00000296444 IGKV3OR2-268A0A0C4DH90 116 aa16.67■□□□□ 0.26
SHISA5-201ENST00000296444 MRPS36P82909 103 aaKnown RBP16.67■□□□□ 0.26
SHISA5-201ENST00000296444 ICOSQ9Y6W8 199 aa16.67■□□□□ 0.26
SHISA5-201ENST00000296444 MEGF8Q7Z7M0 2845 aa16.66■□□□□ 0.26
SHISA5-201ENST00000296444 LITAFQ99732 161 aa16.65■□□□□ 0.26
SHISA5-201ENST00000296444 H7C423 109 aa16.65■□□□□ 0.26
SHISA5-201ENST00000296444 UBE2L6O14933 153 aa16.65■□□□□ 0.26
SHISA5-201ENST00000296444 IGHV3-30-3P0DP02 117 aa16.64■□□□□ 0.25
SHISA5-201ENST00000296444 TIMM21Q9BVV7 248 aa16.64■□□□□ 0.25
SHISA5-201ENST00000296444 CDKN2A-AS1Q9UH64 79 aa16.64■□□□□ 0.25
SHISA5-201ENST00000296444 LINC00242Q5T6M2 205 aa16.63■□□□□ 0.25
SHISA5-201ENST00000296444 TRBV7-7A0A0K0K1E9 115 aa16.61■□□□□ 0.25
SHISA5-201ENST00000296444 KPRPQ5T749 579 aaPredicted RBP16.61■□□□□ 0.25
SHISA5-201ENST00000296444 CSDC2Q9Y534 153 aaKnown RBP16.6■□□□□ 0.25
SHISA5-201ENST00000296444 CSMD3Q7Z407 3707 aa16.6■□□□□ 0.25
SHISA5-201ENST00000296444 MIAQ16674 131 aa16.6■□□□□ 0.25
SHISA5-201ENST00000296444 LST1O00453 97 aa16.59■□□□□ 0.25
SHISA5-201ENST00000296444 CLPSL2Q6UWE3 100 aa16.59■□□□□ 0.25
SHISA5-201ENST00000296444 TENM2Q9NT68 2774 aa16.59■□□□□ 0.25
SHISA5-201ENST00000296444 CFAP161Q6P656 301 aa16.59■□□□□ 0.25
SHISA5-201ENST00000296444 TINCRA0A1B0GVN0 87 aa16.58■□□□□ 0.25
SHISA5-201ENST00000296444 IGHV1-58A0A0C4DH39 117 aa16.58■□□□□ 0.24
SHISA5-201ENST00000296444 TM2D3Q9BRN9 247 aa16.57■□□□□ 0.24
SHISA5-201ENST00000296444 PRSS2P07478 247 aa16.57■□□□□ 0.24
SHISA5-201ENST00000296444 TIMM17BO60830 172 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 SMIM20Q8N5G0 67 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 TMEM126AQ9H061 195 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 C11orf68Q9H3H3 251 aaKnown RBP16.56■□□□□ 0.24
SHISA5-201ENST00000296444 ACYP1P07311 99 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 MEIG1Q5JSS6 88 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 NDUFA12Q9UI09 145 aa16.56■□□□□ 0.24
SHISA5-201ENST00000296444 IMUPQ9GZP8 106 aa16.55■□□□□ 0.24
SHISA5-201ENST00000296444 TMEM101Q96IK0 257 aa16.55■□□□□ 0.24
SHISA5-201ENST00000296444 HERV-K104P63124 156 aa16.54■□□□□ 0.24
SHISA5-201ENST00000296444 C11orf45Q8TAV5 145 aa16.54■□□□□ 0.24
SHISA5-201ENST00000296444 ADAMTSL4-AS1Q5T5F5 129 aa16.53■□□□□ 0.24
SHISA5-201ENST00000296444 CLEC2BQ92478 149 aa16.5■□□□□ 0.23
SHISA5-201ENST00000296444 LYPD5Q6UWN5 251 aa16.5■□□□□ 0.23
SHISA5-201ENST00000296444 IGLV5-45A0A087WSX0 123 aa16.49■□□□□ 0.23
SHISA5-201ENST00000296444 TIRAPP58753 221 aa16.49■□□□□ 0.23
SHISA5-201ENST00000296444 DEFB131BA0A096LNP1 70 aa16.49■□□□□ 0.23
SHISA5-201ENST00000296444 DNAH7Q8WXX0 4024 aa16.48■□□□□ 0.23
SHISA5-201ENST00000296444 LINC00269Q8N2A0 174 aa16.48■□□□□ 0.23
SHISA5-201ENST00000296444 FAM19A3Q7Z5A8 133 aa16.46■□□□□ 0.23
SHISA5-201ENST00000296444 LINC00959A0A1B0GUT2 108 aa16.45■□□□□ 0.22
SHISA5-201ENST00000296444 SMIM1B2RUZ4 78 aa16.45■□□□□ 0.22
SHISA5-201ENST00000296444 IGLV10-54A0A075B6I4 117 aa16.45■□□□□ 0.22
SHISA5-201ENST00000296444 A0A1B0GUV1 79 aa16.44■□□□□ 0.22
SHISA5-201ENST00000296444 HERVK_113P63121 156 aa16.44■□□□□ 0.22
SHISA5-201ENST00000296444 C5orf38Q86SI9 138 aa16.44■□□□□ 0.22
SHISA5-201ENST00000296444 ESRGQ1W209 222 aa16.43■□□□□ 0.22
SHISA5-201ENST00000296444 XCL1P47992 114 aa16.43■□□□□ 0.22
SHISA5-201ENST00000296444 WFDC10BQ8IUB3 73 aa16.43■□□□□ 0.22
SHISA5-201ENST00000296444 ZNF625Q96I27 306 aaPredicted RBP16.42■□□□□ 0.22
SHISA5-201ENST00000296444 NDUFA1O15239 70 aa16.42■□□□□ 0.22
SHISA5-201ENST00000296444 ANGP03950 147 aaKnown RBP16.42■□□□□ 0.22
SHISA5-201ENST00000296444 IGHV3OR16-9A0A0B4J2B5 98 aa16.41■□□□□ 0.22
SHISA5-201ENST00000296444 LELP1Q5T871 98 aa16.41■□□□□ 0.22
SHISA5-201ENST00000296444 CIRBPQ14011 172 aaKnown RBP16.41■□□□□ 0.22
SHISA5-201ENST00000296444 LINC00643Q86TS7 51 aa16.41■□□□□ 0.22
SHISA5-201ENST00000296444 COPS9Q8WXC6 57 aa16.41■□□□□ 0.22
SHISA5-201ENST00000296444 IGLV5-39A0A0G2JS06 123 aa16.4■□□□□ 0.22
SHISA5-201ENST00000296444 PLECQ15149 4684 aaKnown RBP16.39■□□□□ 0.21
SHISA5-201ENST00000296444 COX7A2LO14548 114 aa16.39■□□□□ 0.21
SHISA5-201ENST00000296444 NPC2P61916 151 aa16.38■□□□□ 0.21
SHISA5-201ENST00000296444 FAM236AA0A1B0GUQ0 79 aa16.38■□□□□ 0.21
SHISA5-201ENST00000296444 FAM236BA0A1B0GV22 79 aa16.38■□□□□ 0.21
SHISA5-201ENST00000296444 DAND5Q8N907 189 aa16.37■□□□□ 0.21
SHISA5-201ENST00000296444 KLK12Q9UKR0 248 aa16.37■□□□□ 0.21
SHISA5-201ENST00000296444 SDIM1Q6ZPB5 146 aa16.36■□□□□ 0.21
SHISA5-201ENST00000296444 A0A0U1RRA0 63 aa16.36■□□□□ 0.21
SHISA5-201ENST00000296444 REG3AQ06141 175 aa16.35■□□□□ 0.21
SHISA5-201ENST00000296444 CXCL5P42830 114 aa16.35■□□□□ 0.21
SHISA5-201ENST00000296444 TRACP01848 142 aa16.34■□□□□ 0.21
SHISA5-201ENST00000296444 C3orf22Q8N5N4 141 aa16.34■□□□□ 0.21
SHISA5-201ENST00000296444 LINC00308Q8TCZ7 52 aa16.34■□□□□ 0.21
SHISA5-201ENST00000296444 Q9H8V8 135 aa16.34■□□□□ 0.21
SHISA5-201ENST00000296444 TOMM7Q9P0U1 55 aa16.34■□□□□ 0.21
SHISA5-201ENST00000296444 STARD9Q9P2P6 4700 aa16.33■□□□□ 0.21
SHISA5-201ENST00000296444 H3BNG1 76 aa16.33■□□□□ 0.2
SHISA5-201ENST00000296444 UQCRQO14949 82 aa16.33■□□□□ 0.2
SHISA5-201ENST00000296444 ENHOQ6UWT2 76 aa16.33■□□□□ 0.2
SHISA5-201ENST00000296444 TGP01266 2768 aa16.32■□□□□ 0.2
SHISA5-201ENST00000296444 DNAH10Q8IVF4 4471 aa16.31■□□□□ 0.2
SHISA5-201ENST00000296444 PPDPFQ9H3Y8 114 aa16.31■□□□□ 0.2
SHISA5-201ENST00000296444 DNAH1Q9P2D7 4330 aa16.3■□□□□ 0.2
SHISA5-201ENST00000296444 CHCHD10Q8WYQ3 142 aaPredicted RBP16.3■□□□□ 0.2
SHISA5-201ENST00000296444 C9orf153Q5TBE3 101 aa16.3■□□□□ 0.2
SHISA5-201ENST00000296444 DYNC2H1Q8NCM8 4307 aaKnown RBP16.3■□□□□ 0.2
SHISA5-201ENST00000296444 A0A087WZ39 114 aa16.29■□□□□ 0.2
SHISA5-201ENST00000296444 LINC00526Q96FQ7 95 aa16.29■□□□□ 0.2
SHISA5-201ENST00000296444 SMCR5Q8TEV8 140 aa16.29■□□□□ 0.2
SHISA5-201ENST00000296444 FBN3Q75N90 2809 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms