RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 IGHV3OR16-9A0A0B4J2B5 98 aa10.32□□□□□ -0.76
CCNF-201ENST00000293968 GYPEP15421 78 aa10.32□□□□□ -0.76
CCNF-201ENST00000293968 SS18Q15532 418 aa10.32□□□□□ -0.76
CCNF-201ENST00000293968 DNAJC9-AS1A6NH13 148 aa10.31□□□□□ -0.76
CCNF-201ENST00000293968 IL17DQ8TAD2 202 aa10.31□□□□□ -0.76
CCNF-201ENST00000293968 ESM1Q9NQ30 184 aa10.31□□□□□ -0.76
CCNF-201ENST00000293968 FSHBP01225 129 aa10.31□□□□□ -0.76
CCNF-201ENST00000293968 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
CCNF-201ENST00000293968 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
CCNF-201ENST00000293968 A0A087WZ39 114 aa10.29□□□□□ -0.76
CCNF-201ENST00000293968 RPL18AQ02543 176 aaKnown RBP10.29□□□□□ -0.76
CCNF-201ENST00000293968 DEFB113Q30KQ7 82 aa10.29□□□□□ -0.76
CCNF-201ENST00000293968 FHL2Q14192 279 aa10.29□□□□□ -0.76
CCNF-201ENST00000293968 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
CCNF-201ENST00000293968 USP17L23D6RBM5 183 aa10.27□□□□□ -0.77
CCNF-201ENST00000293968 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.77
CCNF-201ENST00000293968 S100A7L2Q5SY68 101 aa10.27□□□□□ -0.77
CCNF-201ENST00000293968 TRAV23DV6A0A075B6W5 121 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
CCNF-201ENST00000293968 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 J3KT08 172 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 DEFB4AO15263 64 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 HILS1P60008 231 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 Q6JHZ5 121 aa10.26□□□□□ -0.77
CCNF-201ENST00000293968 SETXQ7Z333 2677 aaKnown RBP10.25□□□□□ -0.77
CCNF-201ENST00000293968 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
CCNF-201ENST00000293968 ANGP03950 147 aaKnown RBP10.24□□□□□ -0.77
CCNF-201ENST00000293968 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
CCNF-201ENST00000293968 GCN1Q92616 2671 aaKnown RBP10.24□□□□□ -0.77
CCNF-201ENST00000293968 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
CCNF-201ENST00000293968 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
CCNF-201ENST00000293968 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
CCNF-201ENST00000293968 FLNAP21333 2647 aaKnown RBP10.23□□□□□ -0.77
CCNF-201ENST00000293968 CMC4P56277 68 aaPredicted RBP10.23□□□□□ -0.77
CCNF-201ENST00000293968 SERP2Q8N6R1 65 aa10.23□□□□□ -0.77
CCNF-201ENST00000293968 HIVEP2P31629 2446 aa10.23□□□□□ -0.77
CCNF-201ENST00000293968 HTN3P15516 51 aa10.22□□□□□ -0.77
CCNF-201ENST00000293968 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
CCNF-201ENST00000293968 BBC3Q96PG8 261 aaPredicted RBP10.22□□□□□ -0.77
CCNF-201ENST00000293968 C6orf99Q4VX62 202 aa10.22□□□□□ -0.77
CCNF-201ENST00000293968 KIR2DL5BQ8NHK3 375 aa10.22□□□□□ -0.77
CCNF-201ENST00000293968 DSCR8Q96T75 97 aa10.22□□□□□ -0.77
CCNF-201ENST00000293968 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.77
CCNF-201ENST00000293968 GHRHP01286 108 aa10.21□□□□□ -0.78
CCNF-201ENST00000293968 CCKP06307 115 aa10.21□□□□□ -0.78
CCNF-201ENST00000293968 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.78
CCNF-201ENST00000293968 Q8N3U1 123 aa10.21□□□□□ -0.78
CCNF-201ENST00000293968 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.78
CCNF-201ENST00000293968 CRYGAP11844 174 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 Q8N814 137 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 CR1P17927 2039 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 ITPR3Q14573 2671 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 UBL5Q9BZL1 73 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 LINC01006Q8NI28 216 aa10.2□□□□□ -0.78
CCNF-201ENST00000293968 JMJD7-PLA2G4BH0Y9G9 81 aa10.19□□□□□ -0.78
CCNF-201ENST00000293968 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
CCNF-201ENST00000293968 HAMPP81172 84 aa10.19□□□□□ -0.78
CCNF-201ENST00000293968 Q8IZM0 81 aa10.18□□□□□ -0.78
CCNF-201ENST00000293968 CHCHD10Q8WYQ3 142 aaPredicted RBP10.18□□□□□ -0.78
CCNF-201ENST00000293968 NOTCH2Q04721 2471 aa10.17□□□□□ -0.78
CCNF-201ENST00000293968 IGLV1-51P01701 117 aa10.17□□□□□ -0.78
CCNF-201ENST00000293968 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
CCNF-201ENST00000293968 C20orf197Q8N268 126 aa10.16□□□□□ -0.78
CCNF-201ENST00000293968 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
CCNF-201ENST00000293968 UPK3BQ9BT76 320 aa10.15□□□□□ -0.78
CCNF-201ENST00000293968 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
CCNF-201ENST00000293968 OBSCN-AS1Q96MR7 158 aa10.15□□□□□ -0.78
CCNF-201ENST00000293968 REG3AQ06141 175 aa10.15□□□□□ -0.79
CCNF-201ENST00000293968 C6orf223Q8N319 242 aa10.14□□□□□ -0.79
CCNF-201ENST00000293968 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
CCNF-201ENST00000293968 RBM3P98179 157 aaKnown RBP10.13□□□□□ -0.79
CCNF-201ENST00000293968 LY6G6DO95868 133 aa10.13□□□□□ -0.79
CCNF-201ENST00000293968 DEFB135Q30KP9 77 aa10.13□□□□□ -0.79
CCNF-201ENST00000293968 TMEM258P61165 79 aa10.12□□□□□ -0.79
CCNF-201ENST00000293968 UNQ6190/PRO20217Q6UXQ8 127 aa10.12□□□□□ -0.79
CCNF-201ENST00000293968 NANOS2P60321 138 aaKnown RBP10.12□□□□□ -0.79
CCNF-201ENST00000293968 CD164L2Q6UWJ8 174 aa10.12□□□□□ -0.79
CCNF-201ENST00000293968 SPAG11BQ08648 103 aa10.11□□□□□ -0.79
CCNF-201ENST00000293968 SMIM9A6NGZ8 99 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 XAGE1AQ9HD64 81 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 DPH3Q96FX2 82 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 A0A1B0GUV1 79 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 DAD1P61803 113 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 SCXQ7RTU7 201 aa10.1□□□□□ -0.79
CCNF-201ENST00000293968 Q6ZQY7 126 aa10.09□□□□□ -0.79
CCNF-201ENST00000293968 KLK12Q9UKR0 248 aa10.09□□□□□ -0.79
CCNF-201ENST00000293968 Q8NDZ9 215 aa10.07□□□□□ -0.8
CCNF-201ENST00000293968 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
CCNF-201ENST00000293968 ATP5EP2Q5VTU8 51 aa10.07□□□□□ -0.8
CCNF-201ENST00000293968 LINC00575Q6W349 94 aa10.07□□□□□ -0.8
CCNF-201ENST00000293968 APCP25054 2843 aa10.06□□□□□ -0.8
CCNF-201ENST00000293968 M0R2N4 97 aa10.06□□□□□ -0.8
CCNF-201ENST00000293968 ZNF843Q8N446 348 aa10.06□□□□□ -0.8
CCNF-201ENST00000293968 NDUFC2O95298 119 aa10.06□□□□□ -0.8
CCNF-201ENST00000293968 USP24Q9UPU5 2620 aa10.06□□□□□ -0.8
CCNF-201ENST00000293968 COX17Q14061 63 aa10.05□□□□□ -0.8
CCNF-201ENST00000293968 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
CCNF-201ENST00000293968 C5orf47Q569G3 176 aa10.05□□□□□ -0.8
CCNF-201ENST00000293968 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms