RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 HSPB8Q9UJY1 196 aa17.12■□□□□ 0.33
SSU72-201ENST00000291386 TRBV30A0A0K0K1B3 111 aa17.11■□□□□ 0.33
SSU72-201ENST00000291386 SMR3BP02814 79 aaPredicted RBP17.11■□□□□ 0.33
SSU72-201ENST00000291386 C6orf226Q5I0X4 101 aa17.11■□□□□ 0.33
SSU72-201ENST00000291386 LINC00474Q9P2X8 69 aa17.11■□□□□ 0.33
SSU72-201ENST00000291386 C6orf48Q9UBA6 75 aa17.11■□□□□ 0.33
SSU72-201ENST00000291386 C11orf86A6NJI1 115 aa17.1■□□□□ 0.33
SSU72-201ENST00000291386 C2orf82Q6UX34 121 aa17.1■□□□□ 0.33
SSU72-201ENST00000291386 FAT1Q14517 4588 aa17.09■□□□□ 0.33
SSU72-201ENST00000291386 F8VRH5 84 aa17.09■□□□□ 0.33
SSU72-201ENST00000291386 SPINK8P0C7L1 97 aa17.09■□□□□ 0.33
SSU72-201ENST00000291386 TLX1NBP0CAT3 122 aa17.09■□□□□ 0.33
SSU72-201ENST00000291386 CXCL5P42830 114 aa17.09■□□□□ 0.33
SSU72-201ENST00000291386 COA6Q5JTJ3 125 aaKnown RBP17.09■□□□□ 0.33
SSU72-201ENST00000291386 IGKV2-24A0A0C4DH68 120 aa17.08■□□□□ 0.32
SSU72-201ENST00000291386 PTTG1IPP53801 180 aa17.08■□□□□ 0.32
SSU72-201ENST00000291386 CKS1BP61024 79 aa17.08■□□□□ 0.32
SSU72-201ENST00000291386 A0A087WYN8 130 aa17.07■□□□□ 0.32
SSU72-201ENST00000291386 IGLV5-39A0A0G2JS06 123 aa17.07■□□□□ 0.32
SSU72-201ENST00000291386 COX7B2Q8TF08 81 aa17.07■□□□□ 0.32
SSU72-201ENST00000291386 FABP4P15090 132 aa17.06■□□□□ 0.32
SSU72-201ENST00000291386 MAJINQ3KP22 176 aa17.06■□□□□ 0.32
SSU72-201ENST00000291386 PLAC8Q9NZF1 115 aa17.06■□□□□ 0.32
SSU72-201ENST00000291386 EPM2AB3EWF7 344 aa17.05■□□□□ 0.32
SSU72-201ENST00000291386 ODF1Q14990 250 aa17.05■□□□□ 0.32
SSU72-201ENST00000291386 DPH3Q96FX2 82 aa17.05■□□□□ 0.32
SSU72-201ENST00000291386 FAM229AH3BQW9 127 aa17.04■□□□□ 0.32
SSU72-201ENST00000291386 KRTAP4-5Q9BYR2 181 aa17.04■□□□□ 0.32
SSU72-201ENST00000291386 GAGE2BQ13066 116 aa17.03■□□□□ 0.32
SSU72-201ENST00000291386 TMEM170BQ5T4T1 132 aa17.03■□□□□ 0.32
SSU72-201ENST00000291386 Q5VSD8 79 aa17.03■□□□□ 0.32
SSU72-201ENST00000291386 RPL18AQ02543 176 aaKnown RBP17.02■□□□□ 0.32
SSU72-201ENST00000291386 LINC00528Q8N1L1 170 aa17.02■□□□□ 0.32
SSU72-201ENST00000291386 STPG4Q8N801 248 aa17.01■□□□□ 0.31
SSU72-201ENST00000291386 Q6ZRP5 223 aa17■□□□□ 0.31
SSU72-201ENST00000291386 NDUFC2-KCTD14E9PQ53 114 aa16.99■□□□□ 0.31
SSU72-201ENST00000291386 H0Y8G0 127 aa16.99■□□□□ 0.31
SSU72-201ENST00000291386 MAP1LC3CQ9BXW4 147 aa16.99■□□□□ 0.31
SSU72-201ENST00000291386 VPS13BQ7Z7G8 4022 aa16.98■□□□□ 0.31
SSU72-201ENST00000291386 TMEM223A0PJW6 202 aa16.98■□□□□ 0.31
SSU72-201ENST00000291386 C9orf116Q5BN46 136 aaPredicted RBP16.97■□□□□ 0.31
SSU72-201ENST00000291386 PLNP26678 52 aa16.95■□□□□ 0.3
SSU72-201ENST00000291386 ABCA13Q86UQ4 5058 aa16.94■□□□□ 0.3
SSU72-201ENST00000291386 PLA2G1BP04054 148 aaKnown RBP16.94■□□□□ 0.3
SSU72-201ENST00000291386 SFTA2Q6UW10 78 aa16.92■□□□□ 0.3
SSU72-201ENST00000291386 A0A1W2PNN7 141 aa16.91■□□□□ 0.3
SSU72-201ENST00000291386 SYS1-DBNDD2H3BUS1 97 aa16.91■□□□□ 0.3
SSU72-201ENST00000291386 DPM2O94777 84 aa16.91■□□□□ 0.3
SSU72-201ENST00000291386 GAGE2EQ4V326 116 aa16.91■□□□□ 0.3
SSU72-201ENST00000291386 GAGE2DQ9UEU5 116 aa16.91■□□□□ 0.3
SSU72-201ENST00000291386 IGKCP01834 107 aa16.88■□□□□ 0.29
SSU72-201ENST00000291386 KRTAP10-4P60372 401 aaPredicted RBP16.88■□□□□ 0.29
SSU72-201ENST00000291386 PET117Q6UWS5 81 aa16.87■□□□□ 0.29
SSU72-201ENST00000291386 PMCHL2Q9BQD1 86 aa16.87■□□□□ 0.29
SSU72-201ENST00000291386 C9orf129Q5T035 196 aaKnown RBP16.86■□□□□ 0.29
SSU72-201ENST00000291386 C7orf33Q8WU49 177 aa16.86■□□□□ 0.29
SSU72-201ENST00000291386 ZNF625Q96I27 306 aaPredicted RBP16.86■□□□□ 0.29
SSU72-201ENST00000291386 LINC01545Q5VT33 79 aa16.85■□□□□ 0.29
SSU72-201ENST00000291386 RPL37AP61513 92 aaKnown RBP16.84■□□□□ 0.29
SSU72-201ENST00000291386 PCLOQ9Y6V0 5065 aa16.84■□□□□ 0.29
SSU72-201ENST00000291386 C3orf79P0CE67 100 aa16.83■□□□□ 0.28
SSU72-201ENST00000291386 COX17Q14061 63 aa16.82■□□□□ 0.28
SSU72-201ENST00000291386 SRRM2Q9UQ35 2752 aaKnown RBP16.82■□□□□ 0.28
SSU72-201ENST00000291386 FAM168BA1KXE4 195 aa16.81■□□□□ 0.28
SSU72-201ENST00000291386 HERVK_113P61574 105 aa16.81■□□□□ 0.28
SSU72-201ENST00000291386 ERG28Q9UKR5 140 aa16.81■□□□□ 0.28
SSU72-201ENST00000291386 LEPROTO15243 131 aa16.8■□□□□ 0.28
SSU72-201ENST00000291386 KRTAP7-1Q8IUC3 87 aa16.8■□□□□ 0.28
SSU72-201ENST00000291386 INAFM2P0DMQ5 153 aa16.79■□□□□ 0.28
SSU72-201ENST00000291386 PLEKHB2Q96CS7 222 aa16.79■□□□□ 0.28
SSU72-201ENST00000291386 XAGE1AQ9HD64 81 aa16.79■□□□□ 0.28
SSU72-201ENST00000291386 HIST3H2BBQ8N257 126 aa16.78■□□□□ 0.28
SSU72-201ENST00000291386 S100A6P06703 90 aa16.77■□□□□ 0.28
SSU72-201ENST00000291386 PFN2P35080 140 aa16.76■□□□□ 0.27
SSU72-201ENST00000291386 KRTDAPP60985 99 aa16.76■□□□□ 0.27
SSU72-201ENST00000291386 HERV-K104P63124 156 aa16.76■□□□□ 0.27
SSU72-201ENST00000291386 FAM19A5Q7Z5A7 132 aaPredicted RBP16.76■□□□□ 0.27
SSU72-201ENST00000291386 PHF5AQ7RTV0 110 aaKnown RBP16.75■□□□□ 0.27
SSU72-201ENST00000291386 NDUFA12Q9UI09 145 aa16.75■□□□□ 0.27
SSU72-201ENST00000291386 TSPEAR-AS2P59090 65 aa16.74■□□□□ 0.27
SSU72-201ENST00000291386 PLA2G2DQ9UNK4 145 aa16.74■□□□□ 0.27
SSU72-201ENST00000291386 MYMXA0A1B0GTQ4 84 aa16.73■□□□□ 0.27
SSU72-201ENST00000291386 J3QQQ9 107 aa16.73■□□□□ 0.27
SSU72-201ENST00000291386 E9PLD3 99 aa16.72■□□□□ 0.27
SSU72-201ENST00000291386 S100A2P29034 98 aa16.72■□□□□ 0.27
SSU72-201ENST00000291386 SERTAD4-AS1Q5TG53 156 aa16.72■□□□□ 0.27
SSU72-201ENST00000291386 HIST1H2BLQ99880 126 aa16.72■□□□□ 0.27
SSU72-201ENST00000291386 M0QXV9 152 aa16.71■□□□□ 0.27
SSU72-201ENST00000291386 NMUP48645 174 aa16.71■□□□□ 0.27
SSU72-201ENST00000291386 PRR3P79522 188 aaKnown RBP16.71■□□□□ 0.27
SSU72-201ENST00000291386 C20orf202A1L168 122 aa16.7■□□□□ 0.26
SSU72-201ENST00000291386 LINC00587B1AMM8 73 aa16.69■□□□□ 0.26
SSU72-201ENST00000291386 LGALS3P17931 250 aaKnown RBP16.68■□□□□ 0.26
SSU72-201ENST00000291386 AKR1D1P51857 326 aa16.68■□□□□ 0.26
SSU72-201ENST00000291386 SND1-IT1Q9HBX3 110 aa16.68■□□□□ 0.26
SSU72-201ENST00000291386 TP73-AS1Q9UF72 201 aa16.68■□□□□ 0.26
SSU72-201ENST00000291386 LINC00158P58513 81 aa16.67■□□□□ 0.26
SSU72-201ENST00000291386 SNRPEP62304 92 aaKnown RBP16.67■□□□□ 0.26
SSU72-201ENST00000291386 C22orf24Q9Y442 160 aa16.67■□□□□ 0.26
SSU72-201ENST00000291386 IGLV5-37A0A075B6J1 123 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 451.4 ms