RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RETNQ9HD89 108 aa8.19□□□□□ -1.1
NPC1L1-201ENST00000289547 COL27A1Q8IZC6 1860 aaPredicted RBP8.18□□□□□ -1.1
NPC1L1-201ENST00000289547 A0A0J9YWU9 116 aa8.18□□□□□ -1.1
NPC1L1-201ENST00000289547 H0Y9J4 135 aa8.18□□□□□ -1.1
NPC1L1-201ENST00000289547 RPS28P62857 69 aaKnown RBP8.18□□□□□ -1.1
NPC1L1-201ENST00000289547 REG3AQ06141 175 aa8.17□□□□□ -1.1
NPC1L1-201ENST00000289547 CELA1Q9UNI1 258 aa8.17□□□□□ -1.1
NPC1L1-201ENST00000289547 Q8N3U1 123 aa8.17□□□□□ -1.1
NPC1L1-201ENST00000289547 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
NPC1L1-201ENST00000289547 TRBV6-8A0A0A6YYG3 113 aa8.17□□□□□ -1.1
NPC1L1-201ENST00000289547 ANKRD17O75179 2603 aaKnown RBP8.16□□□□□ -1.1
NPC1L1-201ENST00000289547 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
NPC1L1-201ENST00000289547 LY6G6CO95867 125 aa8.16□□□□□ -1.1
NPC1L1-201ENST00000289547 SETD2Q9BYW2 2564 aaPredicted RBP8.16□□□□□ -1.1
NPC1L1-201ENST00000289547 SEC61GP60059 68 aa8.16□□□□□ -1.1
NPC1L1-201ENST00000289547 WFDC10BQ8IUB3 73 aa8.15□□□□□ -1.1
NPC1L1-201ENST00000289547 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
NPC1L1-201ENST00000289547 KRTAP1-3Q8IUG1 177 aa8.15□□□□□ -1.1
NPC1L1-201ENST00000289547 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
NPC1L1-201ENST00000289547 TRBV7-6A0A0J9YX20 115 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 TRBV6-4A0A1B0GX49 114 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 TLN2Q9Y4G6 2542 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 PSPHP1O15172 72 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 AMELXQ99217 191 aa8.14□□□□□ -1.11
NPC1L1-201ENST00000289547 COX6A2Q02221 97 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 FHL3Q13643 280 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 NANOS2P60321 138 aaKnown RBP8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 Q8N814 137 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 FN1P02751 2386 aaKnown RBP8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 PRYO14603 147 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 F8P00451 2351 aa8.13□□□□□ -1.11
NPC1L1-201ENST00000289547 KPRPQ5T749 579 aaPredicted RBP8.12□□□□□ -1.11
NPC1L1-201ENST00000289547 FLNBO75369 2602 aaKnown RBP8.12□□□□□ -1.11
NPC1L1-201ENST00000289547 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 TET2Q6N021 2002 aaPredicted RBP8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 LINC00959A0A1B0GUT2 108 aa8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 LOC100131303A0A0U1RQF7 123 aa8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 TMEM254Q8TBM7 123 aa8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 CHCHD7Q9BUK0 85 aa8.11□□□□□ -1.11
NPC1L1-201ENST00000289547 EDN2P20800 178 aa8.1□□□□□ -1.11
NPC1L1-201ENST00000289547 PRR3P79522 188 aaKnown RBP8.1□□□□□ -1.11
NPC1L1-201ENST00000289547 HIGD2AQ9BW72 106 aa8.1□□□□□ -1.11
NPC1L1-201ENST00000289547 BEAN1Q3B7T3 259 aa8.1□□□□□ -1.11
NPC1L1-201ENST00000289547 HECTD1Q9ULT8 2610 aa8.1□□□□□ -1.11
NPC1L1-201ENST00000289547 ZNF292O60281 2723 aa8.09□□□□□ -1.11
NPC1L1-201ENST00000289547 A0A096LNI7 61 aa8.09□□□□□ -1.11
NPC1L1-201ENST00000289547 POLQO75417 2590 aa8.09□□□□□ -1.12
NPC1L1-201ENST00000289547 UBE2AP49459 152 aa8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 MRGPRG-AS1Q2M3A8 158 aa8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 MKI67P46013 3256 aaKnown RBP8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 PRR15LQ9BU68 103 aa8.08□□□□□ -1.12
NPC1L1-201ENST00000289547 ESRGQ1W209 222 aa8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 Q6ZVQ6 151 aa8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 LINC00337Q8N6G1 96 aa8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 KRTAP1-1Q07627 177 aa8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 PRRC2CQ9Y520 2896 aaKnown RBP8.07□□□□□ -1.12
NPC1L1-201ENST00000289547 Q8IZM0 81 aa8.06□□□□□ -1.12
NPC1L1-201ENST00000289547 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
NPC1L1-201ENST00000289547 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
NPC1L1-201ENST00000289547 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
NPC1L1-201ENST00000289547 LELP1Q5T871 98 aa8.05□□□□□ -1.12
NPC1L1-201ENST00000289547 KIF25-AS1Q9Y6Z4 181 aa8.05□□□□□ -1.12
NPC1L1-201ENST00000289547 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
NPC1L1-201ENST00000289547 C5orf42Q9H799 3197 aa8.04□□□□□ -1.12
NPC1L1-201ENST00000289547 COX17Q14061 63 aa8.04□□□□□ -1.12
NPC1L1-201ENST00000289547 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
NPC1L1-201ENST00000289547 LAMA3Q16787 3333 aa8.04□□□□□ -1.12
NPC1L1-201ENST00000289547 LAMA2P24043 3122 aaKnown RBP8.04□□□□□ -1.12
NPC1L1-201ENST00000289547 TRBV10-3A0A0K0K1G6 114 aa8.03□□□□□ -1.12
NPC1L1-201ENST00000289547 M0R2N4 97 aa8.03□□□□□ -1.12
NPC1L1-201ENST00000289547 M0R378 163 aa8.03□□□□□ -1.12
NPC1L1-201ENST00000289547 A0A087WZ39 114 aa8.03□□□□□ -1.12
NPC1L1-201ENST00000289547 B9D2Q9BPU9 175 aa8.03□□□□□ -1.12
NPC1L1-201ENST00000289547 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
NPC1L1-201ENST00000289547 Q6ZTC4 211 aa8.02□□□□□ -1.13
NPC1L1-201ENST00000289547 ACANP16112 2415 aa8.02□□□□□ -1.13
NPC1L1-201ENST00000289547 HELZ2Q9BYK8 2649 aaKnown RBP8.02□□□□□ -1.13
NPC1L1-201ENST00000289547 FAM218AQ96MZ4 157 aa8.02□□□□□ -1.13
NPC1L1-201ENST00000289547 USP24Q9UPU5 2620 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 Q6ZSN1 163 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 MTORP42345 2549 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 Q8N9L7 120 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 FAM19A4Q96LR4 140 aa8.01□□□□□ -1.13
NPC1L1-201ENST00000289547 CYSRT1A8MQ03 144 aa8□□□□□ -1.13
NPC1L1-201ENST00000289547 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
NPC1L1-201ENST00000289547 LINC00315P59091 139 aa8□□□□□ -1.13
NPC1L1-201ENST00000289547 LINC00575Q6W349 94 aa8□□□□□ -1.13
NPC1L1-201ENST00000289547 A8MTW9 85 aa7.99□□□□□ -1.13
NPC1L1-201ENST00000289547 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
NPC1L1-201ENST00000289547 MUC7Q8TAX7 377 aa7.99□□□□□ -1.13
NPC1L1-201ENST00000289547 KLK9Q2XQG4 91 aa7.98□□□□□ -1.13
NPC1L1-201ENST00000289547 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 1220.1 ms