RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
TPM1-202ENST00000288398 RNF213Q63HN8 5207 aa8.5□□□□□ -1.05
TPM1-202ENST00000288398 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
TPM1-202ENST00000288398 HERVK_113P63121 156 aa8.49□□□□□ -1.05
TPM1-202ENST00000288398 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
TPM1-202ENST00000288398 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
TPM1-202ENST00000288398 Q8IZM0 81 aa8.49□□□□□ -1.05
TPM1-202ENST00000288398 ZC2HC1BQ5TFG8 222 aa8.48□□□□□ -1.05
TPM1-202ENST00000288398 LINC00469Q8N7U9 141 aa8.48□□□□□ -1.05
TPM1-202ENST00000288398 AMELXQ99217 191 aa8.48□□□□□ -1.05
TPM1-202ENST00000288398 NUPR1O60356 82 aa8.47□□□□□ -1.05
TPM1-202ENST00000288398 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
TPM1-202ENST00000288398 F8VRH5 84 aa8.46□□□□□ -1.06
TPM1-202ENST00000288398 CXCL5P42830 114 aa8.46□□□□□ -1.06
TPM1-202ENST00000288398 KRTAP7-1Q8IUC3 87 aa8.46□□□□□ -1.06
TPM1-202ENST00000288398 SVBPQ8N300 66 aa8.46□□□□□ -1.06
TPM1-202ENST00000288398 XAGE1AQ9HD64 81 aa8.46□□□□□ -1.06
TPM1-202ENST00000288398 IGIPA6NJ69 53 aa8.45□□□□□ -1.06
TPM1-202ENST00000288398 ZNF861PO60384 105 aa8.45□□□□□ -1.06
TPM1-202ENST00000288398 PRR4Q16378 134 aa8.45□□□□□ -1.06
TPM1-202ENST00000288398 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
TPM1-202ENST00000288398 C22orf24Q9Y442 160 aa8.45□□□□□ -1.06
TPM1-202ENST00000288398 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
TPM1-202ENST00000288398 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
TPM1-202ENST00000288398 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
TPM1-202ENST00000288398 SNAPINO95295 136 aa8.43□□□□□ -1.06
TPM1-202ENST00000288398 APOC3P02656 99 aa8.43□□□□□ -1.06
TPM1-202ENST00000288398 KRTAP1-4P0C5Y4 121 aa8.43□□□□□ -1.06
TPM1-202ENST00000288398 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
TPM1-202ENST00000288398 LINC01549A6NIU2 74 aa8.42□□□□□ -1.06
TPM1-202ENST00000288398 ERASQ7Z444 233 aa8.42□□□□□ -1.06
TPM1-202ENST00000288398 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
TPM1-202ENST00000288398 TOMM6Q96B49 74 aa8.42□□□□□ -1.06
TPM1-202ENST00000288398 TP73-AS1Q9UF72 201 aa8.42□□□□□ -1.06
TPM1-202ENST00000288398 RHEBQ15382 184 aa8.4□□□□□ -1.06
TPM1-202ENST00000288398 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
TPM1-202ENST00000288398 COX7B2Q8TF08 81 aa8.4□□□□□ -1.06
TPM1-202ENST00000288398 BCE1O60756 84 aa8.39□□□□□ -1.07
TPM1-202ENST00000288398 S100PP25815 95 aa8.39□□□□□ -1.07
TPM1-202ENST00000288398 PDZD11Q5EBL8 140 aa8.39□□□□□ -1.07
TPM1-202ENST00000288398 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
TPM1-202ENST00000288398 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
TPM1-202ENST00000288398 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
TPM1-202ENST00000288398 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
TPM1-202ENST00000288398 TRAV9-1A0A075B6T8 112 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 H3BRM9 83 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 TSPAN13O95857 204 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 CRYGAP11844 174 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 UBE2AP49459 152 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 RAB5BP61020 215 aa8.37□□□□□ -1.07
TPM1-202ENST00000288398 GAGE10A6NGK3 116 aa8.36□□□□□ -1.07
TPM1-202ENST00000288398 ATP5LO75964 103 aa8.36□□□□□ -1.07
TPM1-202ENST00000288398 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
TPM1-202ENST00000288398 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
TPM1-202ENST00000288398 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
TPM1-202ENST00000288398 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
TPM1-202ENST00000288398 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
TPM1-202ENST00000288398 CST9LQ9H4G1 147 aa8.35□□□□□ -1.07
TPM1-202ENST00000288398 PMVKQ15126 192 aa8.34□□□□□ -1.07
TPM1-202ENST00000288398 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
TPM1-202ENST00000288398 LPAP08519 4548 aa8.33□□□□□ -1.08
TPM1-202ENST00000288398 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
TPM1-202ENST00000288398 A0A0U1RQV1 116 aa8.33□□□□□ -1.08
TPM1-202ENST00000288398 COX19Q49B96 90 aa8.33□□□□□ -1.08
TPM1-202ENST00000288398 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
TPM1-202ENST00000288398 SCO1O75880 301 aa8.32□□□□□ -1.08
TPM1-202ENST00000288398 NDUFA6P56556 154 aa8.32□□□□□ -1.08
TPM1-202ENST00000288398 PFN2P35080 140 aa8.31□□□□□ -1.08
TPM1-202ENST00000288398 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
TPM1-202ENST00000288398 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 A0A087X002 238 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 COLCA2A8K830 154 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
TPM1-202ENST00000288398 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
TPM1-202ENST00000288398 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
TPM1-202ENST00000288398 RPL24P83731 157 aaKnown RBP8.28□□□□□ -1.08
TPM1-202ENST00000288398 ANAPC11Q9NYG5 84 aa8.27□□□□□ -1.09
TPM1-202ENST00000288398 IGLC3P0DOY3 106 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 SFTA2Q6UW10 78 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 CBLN2Q8IUK8 224 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
TPM1-202ENST00000288398 COX17Q14061 63 aa8.25□□□□□ -1.09
TPM1-202ENST00000288398 HBDP02042 147 aa8.24□□□□□ -1.09
TPM1-202ENST00000288398 PRLHP81277 87 aa8.24□□□□□ -1.09
TPM1-202ENST00000288398 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
TPM1-202ENST00000288398 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
TPM1-202ENST00000288398 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
TPM1-202ENST00000288398 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
TPM1-202ENST00000288398 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
TPM1-202ENST00000288398 ZNF625Q96I27 306 aaPredicted RBP8.23□□□□□ -1.09
TPM1-202ENST00000288398 TMEM126AQ9H061 195 aa8.23□□□□□ -1.09
TPM1-202ENST00000288398 LINC00614P0C842 121 aa8.22□□□□□ -1.09
TPM1-202ENST00000288398 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
TPM1-202ENST00000288398 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms