RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 C16orf74Q96GX8 76 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 CHD6Q8TD26 2715 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 RYR3Q15413 4870 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 M0QY20 66 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 RNASE3P12724 160 aaKnown RBP2.07□□□□□ -2.08
HERC4-201ENST00000277817 DEFB114Q30KQ6 69 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 Q6ZUT4 128 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 CUBNO60494 3623 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 TNXBP22105 4242 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGHV4-4A0A075B6R2 117 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 TCL1BO95988 128 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 DEFB135Q30KP9 77 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 COX7B2Q8TF08 81 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 CDKN2A-AS1Q9UH64 79 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 COL6A5A8TX70 2615 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 CFAP47Q6ZTR5 3102 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGLV5-45A0A087WSX0 123 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 A0A0J9YXY3 114 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 LGALS9O00182 355 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGHV3-33P01772 117 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 PSMB8P28062 276 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 C9orf153Q5TBE3 101 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 C18orf65Q6ZTR6 163 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
HERC4-201ENST00000277817 IGLV4-3A0A075B6K6 122 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 IGKV2D-24A0A075B6R9 120 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 PRR4Q16378 134 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 MRGPRG-AS1Q2M3A8 158 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 MIR7-3HGQ8N6C7 128 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 UBL5Q9BZL1 73 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 DMBT1Q9UGM3 2413 aaPredicted RBP2.06□□□□□ -2.08
HERC4-201ENST00000277817 COX7A2LO14548 114 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 ATP5G1P05496 136 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 SPART-AS1P0CW21 52 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 ZNF22P17026 224 aaPredicted RBP2.06□□□□□ -2.08
HERC4-201ENST00000277817 CFAP126Q5VTH2 177 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 CSNK1G2-AS1Q8NCQ2 148 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 DEFB105AQ8NG35 78 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 TMEM263Q8WUH6 116 aaKnown RBP2.06□□□□□ -2.08
HERC4-201ENST00000277817 ZNF702PQ9H963 129 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 A0A087X002 238 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 TRBV10-2A0A0K0K1G8 114 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 LECT2O14960 151 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 SMIM29Q86T20 159 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
HERC4-201ENST00000277817 SPANXB1Q9NS25 103 aaPredicted RBP2.06□□□□□ -2.08
HERC4-201ENST00000277817 A0A096LNT2 108 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 TEX49A0A1B0GTD5 131 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 TMEM223A0PJW6 202 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 C8orf87E5RJ46 101 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 POLR2KP53803 58 aaKnown RBP2.05□□□□□ -2.08
HERC4-201ENST00000277817 C9orf66Q5T8R8 295 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 DCANP1Q8TF63 244 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 ODF3Q96PU9 254 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 ORMDL1Q9P0S3 153 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 KLK12Q9UKR0 248 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 TET2Q6N021 2002 aaPredicted RBP2.05□□□□□ -2.08
HERC4-201ENST00000277817 LAMA1P25391 3075 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 TRBV10-1A0A0K0K1A3 114 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 H0YGX0 51 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 MIAQ16674 131 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 CASC10Q5T4H9 136 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 CNFNQ9BYD5 112 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 FBN3Q75N90 2809 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 PKD1P98161 4303 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 HERC2O95714 4834 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 A0A096LNJ9 63 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 F8WEM9 126 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 CAMK2N2Q96S95 79 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 TMEM126AQ9H061 195 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 PRO0255Q9UI72 69 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 CR1P17927 2039 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 H0Y9J4 135 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 NCR3O14931 201 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 MT-ATP8P03928 68 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 KRTAP10-9P60411 292 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 KRTAP1-1Q07627 177 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 LINC00269Q8N2A0 174 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 WFDC10AQ9H1F0 79 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 SS18L2Q9UHA2 77 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 MGAQ8IWI9 3026 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
HERC4-201ENST00000277817 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 ACYP1P07311 99 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 INSL3P51460 131 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 FAM222AQ5U5X8 452 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 ZNF580Q9UK33 172 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 CENPEQ02224 2701 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 MAP1AP78559 2803 aaPredicted RBP2.04□□□□□ -2.08
HERC4-201ENST00000277817 A0A0B4J2C4 111 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 IGIPA6NJ69 53 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 EPM2AB3EWF7 344 aa2.04□□□□□ -2.08
HERC4-201ENST00000277817 LINC00308Q8TCZ7 52 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms