RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 RETNQ9HD89 108 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 M0R2N4 97 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 LINC00242Q5T6M2 205 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 DCHS2Q6V1P9 2916 aa8.14□□□□□ -1.11
USP6NL-201ENST00000277575 B5MCH6 92 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 MP68P56378 58 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 TEX49A0A1B0GTD5 131 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 ATRQ13535 2644 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
USP6NL-201ENST00000277575 G3V4G9 280 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 POM121L12Q8N7R1 296 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 H0Y9J4 135 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
USP6NL-201ENST00000277575 BPY2O14599 106 aa8.11□□□□□ -1.11
USP6NL-201ENST00000277575 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
USP6NL-201ENST00000277575 CENPEQ02224 2701 aa8.11□□□□□ -1.11
USP6NL-201ENST00000277575 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
USP6NL-201ENST00000277575 Q8IZM0 81 aa8.11□□□□□ -1.11
USP6NL-201ENST00000277575 CYSRT1A8MQ03 144 aa8.1□□□□□ -1.11
USP6NL-201ENST00000277575 Q6ZTC4 211 aa8.1□□□□□ -1.11
USP6NL-201ENST00000277575 FHL2Q14192 279 aa8.1□□□□□ -1.11
USP6NL-201ENST00000277575 BEAN1Q3B7T3 259 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 Q6ZQY7 126 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 CHCHD7Q9BUK0 85 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 M0R378 163 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 LY6G6CO95867 125 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
USP6NL-201ENST00000277575 IGLV4-60A0A075B6I1 120 aa8.08□□□□□ -1.12
USP6NL-201ENST00000277575 UNQ6190/PRO20217Q6UXQ8 127 aa8.08□□□□□ -1.12
USP6NL-201ENST00000277575 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
USP6NL-201ENST00000277575 COX17Q14061 63 aa8.07□□□□□ -1.12
USP6NL-201ENST00000277575 Q8N2B8 174 aa8.07□□□□□ -1.12
USP6NL-201ENST00000277575 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 SMIM11BQ8TCY0 68 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 C7orf33Q8WU49 177 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 CCKP06307 115 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 Q6ZSN1 163 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 MUC7Q8TAX7 377 aa8.06□□□□□ -1.12
USP6NL-201ENST00000277575 TMEM258P61165 79 aa8.05□□□□□ -1.12
USP6NL-201ENST00000277575 SMIM20Q8N5G0 67 aa8.05□□□□□ -1.12
USP6NL-201ENST00000277575 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
USP6NL-201ENST00000277575 ZNF292O60281 2723 aa8.05□□□□□ -1.12
USP6NL-201ENST00000277575 A0A096LNJ9 63 aa8.05□□□□□ -1.12
USP6NL-201ENST00000277575 LST1O00453 97 aa8.05□□□□□ -1.12
USP6NL-201ENST00000277575 UPK3BQ9BT76 320 aa8.04□□□□□ -1.12
USP6NL-201ENST00000277575 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
USP6NL-201ENST00000277575 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
USP6NL-201ENST00000277575 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
USP6NL-201ENST00000277575 EGFEM1PQ0D2K5 195 aa8.04□□□□□ -1.12
USP6NL-201ENST00000277575 COX6A2Q02221 97 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 SCXQ7RTU7 201 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 AMELXQ99217 191 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 C9orf116Q5BN46 136 aaPredicted RBP8.03□□□□□ -1.12
USP6NL-201ENST00000277575 WFDC9Q8NEX5 89 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
USP6NL-201ENST00000277575 NUPR2A6NF83 97 aa8.02□□□□□ -1.12
USP6NL-201ENST00000277575 MT-ATP8P03928 68 aa8.02□□□□□ -1.13
USP6NL-201ENST00000277575 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
USP6NL-201ENST00000277575 HELZ2Q9BYK8 2649 aaKnown RBP8.01□□□□□ -1.13
USP6NL-201ENST00000277575 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
USP6NL-201ENST00000277575 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
USP6NL-201ENST00000277575 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
USP6NL-201ENST00000277575 SS18L2Q9UHA2 77 aa8.01□□□□□ -1.13
USP6NL-201ENST00000277575 TACC2O95359 2948 aa8□□□□□ -1.13
USP6NL-201ENST00000277575 PTPRBP23467 1997 aa8□□□□□ -1.13
USP6NL-201ENST00000277575 A0A1B0GUV1 79 aa8□□□□□ -1.13
USP6NL-201ENST00000277575 ATP5EP2Q5VTU8 51 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 ENHOQ6UWT2 76 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 CELSR1Q9NYQ6 3014 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 USP17L23D6RBM5 183 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 LYPD5Q6UWN5 251 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 WFDC10BQ8IUB3 73 aa7.99□□□□□ -1.13
USP6NL-201ENST00000277575 C6orf223Q8N319 242 aa7.98□□□□□ -1.13
USP6NL-201ENST00000277575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-201ENST00000277575 FHL3Q13643 280 aa7.97□□□□□ -1.13
USP6NL-201ENST00000277575 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
USP6NL-201ENST00000277575 C20orf197Q8N268 126 aa7.97□□□□□ -1.13
USP6NL-201ENST00000277575 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
USP6NL-201ENST00000277575 PRR3P79522 188 aaKnown RBP7.97□□□□□ -1.13
USP6NL-201ENST00000277575 FLNAP21333 2647 aaKnown RBP7.97□□□□□ -1.13
USP6NL-201ENST00000277575 CFAP46Q8IYW2 2715 aa7.96□□□□□ -1.13
USP6NL-201ENST00000277575 PLAC8L1A1L4L8 177 aa7.96□□□□□ -1.13
USP6NL-201ENST00000277575 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.13
USP6NL-201ENST00000277575 C5orf47Q569G3 176 aa7.96□□□□□ -1.14
USP6NL-201ENST00000277575 LRBAP50851 2863 aa7.96□□□□□ -1.14
USP6NL-201ENST00000277575 CRYBG3Q68DQ2 2970 aa7.96□□□□□ -1.14
USP6NL-201ENST00000277575 M0QXV9 152 aa7.96□□□□□ -1.14
USP6NL-201ENST00000277575 NDUFV3P56181 108 aaKnown RBP7.96□□□□□ -1.14
USP6NL-201ENST00000277575 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.14
USP6NL-201ENST00000277575 PCSK5Q92824 1860 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms