RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 KRTAP1-5Q9BYS1 174 aa16.51■□□□□ 0.23
SSBP4-201ENST00000270061 IGHV3-30P01768 117 aa16.5■□□□□ 0.23
SSBP4-201ENST00000270061 IGHV3-33P01772 117 aa16.5■□□□□ 0.23
SSBP4-201ENST00000270061 IGHV3-30-5P0DP03 117 aa16.5■□□□□ 0.23
SSBP4-201ENST00000270061 ZNF625Q96I27 306 aaPredicted RBP16.5■□□□□ 0.23
SSBP4-201ENST00000270061 TIMM17BO60830 172 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 PTTG1IPP53801 180 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 ENHOQ6UWT2 76 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 COX7B2Q8TF08 81 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 LINC01556Q5JQF7 62 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 LITAFQ99732 161 aa16.49■□□□□ 0.23
SSBP4-201ENST00000270061 TRAV8-4A0A0B4J246 113 aa16.47■□□□□ 0.23
SSBP4-201ENST00000270061 K7EP13 123 aa16.47■□□□□ 0.23
SSBP4-201ENST00000270061 TAX1BP3O14907 124 aa16.47■□□□□ 0.23
SSBP4-201ENST00000270061 HERV-K104P63124 156 aa16.47■□□□□ 0.23
SSBP4-201ENST00000270061 COX7A2LO14548 114 aa16.46■□□□□ 0.22
SSBP4-201ENST00000270061 TNP2Q05952 138 aa16.46■□□□□ 0.22
SSBP4-201ENST00000270061 FOXI1Q12951 378 aa16.46■□□□□ 0.22
SSBP4-201ENST00000270061 Q6ZVH6 145 aa16.46■□□□□ 0.22
SSBP4-201ENST00000270061 IGLV10-54A0A075B6I4 117 aa16.45■□□□□ 0.22
SSBP4-201ENST00000270061 SPANXDQ9BXN6 97 aa16.45■□□□□ 0.22
SSBP4-201ENST00000270061 SPANXCQ9NY87 97 aa16.45■□□□□ 0.22
SSBP4-201ENST00000270061 DNAH11Q96DT5 4516 aa16.44■□□□□ 0.22
SSBP4-201ENST00000270061 CRPP02741 224 aa16.44■□□□□ 0.22
SSBP4-201ENST00000270061 DNAH10OSP0CZ25 163 aa16.44■□□□□ 0.22
SSBP4-201ENST00000270061 TMEM238LA0A1B0GVL6 79 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 A6NJY4 79 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 SMIM13P0DJ93 91 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 MIAQ16674 131 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 SFTA2Q6UW10 78 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 A0A1B0GWB2 263 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 CIRBPQ14011 172 aaKnown RBP16.43■□□□□ 0.22
SSBP4-201ENST00000270061 COX11Q9Y6N1 276 aa16.43■□□□□ 0.22
SSBP4-201ENST00000270061 DYNC1H1Q14204 4646 aaKnown RBP16.42■□□□□ 0.22
SSBP4-201ENST00000270061 Q8IZM0 81 aa16.42■□□□□ 0.22
SSBP4-201ENST00000270061 UBE2WQ96B02 151 aa16.42■□□□□ 0.22
SSBP4-201ENST00000270061 TOMM7Q9P0U1 55 aa16.42■□□□□ 0.22
SSBP4-201ENST00000270061 ADAMTSL4-AS1Q5T5F5 129 aa16.41■□□□□ 0.22
SSBP4-201ENST00000270061 NHP2Q9NX24 153 aaKnown RBP16.41■□□□□ 0.22
SSBP4-201ENST00000270061 GAGE12HA6NDE8 117 aa16.4■□□□□ 0.22
SSBP4-201ENST00000270061 KIAA1109Q2LD37 5005 aa16.39■□□□□ 0.21
SSBP4-201ENST00000270061 MUSTN1Q8IVN3 82 aa16.38■□□□□ 0.21
SSBP4-201ENST00000270061 MALP21145 153 aa16.38■□□□□ 0.21
SSBP4-201ENST00000270061 C6orf226Q5I0X4 101 aa16.38■□□□□ 0.21
SSBP4-201ENST00000270061 PRSS2P07478 247 aa16.37■□□□□ 0.21
SSBP4-201ENST00000270061 RPL24P83731 157 aaKnown RBP16.37■□□□□ 0.21
SSBP4-201ENST00000270061 IFITM1P13164 125 aa16.36■□□□□ 0.21
SSBP4-201ENST00000270061 APOMO95445 188 aa16.36■□□□□ 0.21
SSBP4-201ENST00000270061 KIAA0087Q14695 138 aa16.36■□□□□ 0.21
SSBP4-201ENST00000270061 C9orf118A6NHY6 69 aa16.35■□□□□ 0.21
SSBP4-201ENST00000270061 KRTAP26-1Q6PEX3 210 aa16.35■□□□□ 0.21
SSBP4-201ENST00000270061 K7ERJ3 54 aa16.34■□□□□ 0.21
SSBP4-201ENST00000270061 MEIG1Q5JSS6 88 aa16.34■□□□□ 0.21
SSBP4-201ENST00000270061 HERC2O95714 4834 aa16.34■□□□□ 0.21
SSBP4-201ENST00000270061 CXCL5P42830 114 aa16.33■□□□□ 0.21
SSBP4-201ENST00000270061 RAB37Q96AX2 223 aa16.33■□□□□ 0.2
SSBP4-201ENST00000270061 A4D1N5 150 aa16.32■□□□□ 0.2
SSBP4-201ENST00000270061 PPDPFQ9H3Y8 114 aa16.32■□□□□ 0.2
SSBP4-201ENST00000270061 IBA57-AS1B1ANH7 110 aa16.31■□□□□ 0.2
SSBP4-201ENST00000270061 Q6ZRN7 208 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-201ENST00000270061 CFC1BP0CG36 223 aa16.31■□□□□ 0.2
SSBP4-201ENST00000270061 CFC1P0CG37 223 aa16.31■□□□□ 0.2
SSBP4-201ENST00000270061 COPS9Q8WXC6 57 aa16.31■□□□□ 0.2
SSBP4-201ENST00000270061 CFAP161Q6P656 301 aa16.3■□□□□ 0.2
SSBP4-201ENST00000270061 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.29■□□□□ 0.2
SSBP4-201ENST00000270061 CKS1BP61024 79 aa16.28■□□□□ 0.2
SSBP4-201ENST00000270061 C1orf43Q9BWL3 253 aa16.28■□□□□ 0.2
SSBP4-201ENST00000270061 C16orf90A8MZG2 172 aa16.28■□□□□ 0.2
SSBP4-201ENST00000270061 DAND5Q8N907 189 aa16.28■□□□□ 0.2
SSBP4-201ENST00000270061 LINC00308Q8TCZ7 52 aa16.28■□□□□ 0.2
SSBP4-201ENST00000270061 A0A0B4J2C4 111 aa16.26■□□□□ 0.19
SSBP4-201ENST00000270061 H3BUT2 72 aa16.26■□□□□ 0.19
SSBP4-201ENST00000270061 A0A0U1RRA0 63 aa16.26■□□□□ 0.19
SSBP4-201ENST00000270061 SPAG11BQ08648 103 aa16.26■□□□□ 0.19
SSBP4-201ENST00000270061 C2orf82Q6UX34 121 aa16.26■□□□□ 0.19
SSBP4-201ENST00000270061 LRP1BQ9NZR2 4599 aa16.25■□□□□ 0.19
SSBP4-201ENST00000270061 ERG28Q9UKR5 140 aa16.25■□□□□ 0.19
SSBP4-201ENST00000270061 EIF4EBP3O60516 100 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-201ENST00000270061 NPC2P61916 151 aa16.23■□□□□ 0.19
SSBP4-201ENST00000270061 LINC00158P58513 81 aa16.23■□□□□ 0.19
SSBP4-201ENST00000270061 PRO1854Q9UHT4 67 aa16.23■□□□□ 0.19
SSBP4-201ENST00000270061 IGKV2D-24A0A075B6R9 120 aa16.22■□□□□ 0.19
SSBP4-201ENST00000270061 VAMP3Q15836 100 aa16.22■□□□□ 0.19
SSBP4-201ENST00000270061 SOSTDC1Q6X4U4 206 aa16.22■□□□□ 0.19
SSBP4-201ENST00000270061 MIR7-3HGQ8N6C7 128 aa16.22■□□□□ 0.19
SSBP4-201ENST00000270061 DNAH5Q8TE73 4624 aa16.22■□□□□ 0.19
SSBP4-201ENST00000270061 A0A1W2PPM0 123 aa16.21■□□□□ 0.19
SSBP4-201ENST00000270061 COX17Q14061 63 aa16.21■□□□□ 0.19
SSBP4-201ENST00000270061 KRTAP10-2P60368 255 aa16.21■□□□□ 0.18
SSBP4-201ENST00000270061 NTN5Q8WTR8 489 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-201ENST00000270061 NAA38Q9BRA0 125 aaKnown RBP16.2■□□□□ 0.18
SSBP4-201ENST00000270061 PGPEP1Q9NXJ5 209 aa16.2■□□□□ 0.18
SSBP4-201ENST00000270061 PFN2P35080 140 aa16.18■□□□□ 0.18
SSBP4-201ENST00000270061 RMI2Q96E14 147 aa16.18■□□□□ 0.18
SSBP4-201ENST00000270061 Q9HAA7 133 aa16.18■□□□□ 0.18
SSBP4-201ENST00000270061 RYR1P21817 5038 aa16.17■□□□□ 0.18
SSBP4-201ENST00000270061 C15orf56Q8N910 161 aa16.17■□□□□ 0.18
SSBP4-201ENST00000270061 GVQW2A0A096LPI5 108 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-201ENST00000270061 TSPAN13O95857 204 aa16.16■□□□□ 0.18
SSBP4-201ENST00000270061 FABP2P12104 132 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms