RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 APOMO95445 188 aa10.96□□□□□ -0.65
TPM1-201ENST00000267996 IFITM1P13164 125 aa10.96□□□□□ -0.65
TPM1-201ENST00000267996 K7ERJ3 54 aa10.95□□□□□ -0.66
TPM1-201ENST00000267996 CXCL5P42830 114 aa10.95□□□□□ -0.66
TPM1-201ENST00000267996 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
TPM1-201ENST00000267996 MEIG1Q5JSS6 88 aa10.95□□□□□ -0.66
TPM1-201ENST00000267996 A4D1N5 150 aa10.94□□□□□ -0.66
TPM1-201ENST00000267996 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
TPM1-201ENST00000267996 PLECQ15149 4684 aaKnown RBP10.94□□□□□ -0.66
TPM1-201ENST00000267996 C1orf43Q9BWL3 253 aa10.94□□□□□ -0.66
TPM1-201ENST00000267996 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
TPM1-201ENST00000267996 CFC1BP0CG36 223 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 CFC1P0CG37 223 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 SPAG11BQ08648 103 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 CFAP161Q6P656 301 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 C2orf82Q6UX34 121 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 DAND5Q8N907 189 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
TPM1-201ENST00000267996 CKS1BP61024 79 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
TPM1-201ENST00000267996 CSMD3Q7Z407 3707 aa10.91□□□□□ -0.66
TPM1-201ENST00000267996 A0A0U1RRA0 63 aa10.91□□□□□ -0.66
TPM1-201ENST00000267996 FBN3Q75N90 2809 aa10.9□□□□□ -0.66
TPM1-201ENST00000267996 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.66
TPM1-201ENST00000267996 SOSTDC1Q6X4U4 206 aa10.9□□□□□ -0.66
TPM1-201ENST00000267996 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
TPM1-201ENST00000267996 IGKV2D-24A0A075B6R9 120 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 VPS13DQ5THJ4 4388 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 NPC2P61916 151 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 MIR7-3HGQ8N6C7 128 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 Q9HAA7 133 aa10.89□□□□□ -0.67
TPM1-201ENST00000267996 H3BUT2 72 aa10.88□□□□□ -0.67
TPM1-201ENST00000267996 LINC00158P58513 81 aa10.88□□□□□ -0.67
TPM1-201ENST00000267996 C6orf223Q8N319 242 aa10.88□□□□□ -0.67
TPM1-201ENST00000267996 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
TPM1-201ENST00000267996 NTN5Q8WTR8 489 aaPredicted RBP10.88□□□□□ -0.67
TPM1-201ENST00000267996 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
TPM1-201ENST00000267996 COX17Q14061 63 aa10.86□□□□□ -0.67
TPM1-201ENST00000267996 RMI2Q96E14 147 aa10.86□□□□□ -0.67
TPM1-201ENST00000267996 PRO1854Q9UHT4 67 aa10.86□□□□□ -0.67
TPM1-201ENST00000267996 STARD9Q9P2P6 4700 aa10.86□□□□□ -0.67
TPM1-201ENST00000267996 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
TPM1-201ENST00000267996 PFN2P35080 140 aa10.85□□□□□ -0.67
TPM1-201ENST00000267996 C10orf25Q5T742 122 aa10.85□□□□□ -0.67
TPM1-201ENST00000267996 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
TPM1-201ENST00000267996 LINC00526Q96FQ7 95 aa10.85□□□□□ -0.67
TPM1-201ENST00000267996 NAA38Q9BRA0 125 aaKnown RBP10.85□□□□□ -0.67
TPM1-201ENST00000267996 A0A1W2PPM0 123 aa10.85□□□□□ -0.67
TPM1-201ENST00000267996 KRTAP1-5Q9BYS1 174 aa10.84□□□□□ -0.67
TPM1-201ENST00000267996 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
TPM1-201ENST00000267996 TSPAN13O95857 204 aa10.83□□□□□ -0.68
TPM1-201ENST00000267996 VAMP3Q15836 100 aa10.83□□□□□ -0.68
TPM1-201ENST00000267996 C2orf48Q96LS8 159 aa10.83□□□□□ -0.68
TPM1-201ENST00000267996 LOC107984156A0A0G2JMH3 177 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 F8WDY8 70 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 ZNF561-AS1K7EIQ3 104 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 ARL17AQ8IVW1 177 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 C9orf116Q5BN46 136 aaPredicted RBP10.82□□□□□ -0.68
TPM1-201ENST00000267996 MUC7Q8TAX7 377 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 LYSTQ99698 3801 aa10.82□□□□□ -0.68
TPM1-201ENST00000267996 TENM2Q9NT68 2774 aa10.8□□□□□ -0.68
TPM1-201ENST00000267996 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
TPM1-201ENST00000267996 C6orf48Q9UBA6 75 aa10.8□□□□□ -0.68
TPM1-201ENST00000267996 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
TPM1-201ENST00000267996 FABP2P12104 132 aa10.79□□□□□ -0.68
TPM1-201ENST00000267996 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
TPM1-201ENST00000267996 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
TPM1-201ENST00000267996 CAMK2N2Q96S95 79 aa10.79□□□□□ -0.68
TPM1-201ENST00000267996 USP17L23D6RBM5 183 aa10.77□□□□□ -0.69
TPM1-201ENST00000267996 Q6ZRU5 148 aa10.77□□□□□ -0.69
TPM1-201ENST00000267996 K7EP34 96 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 TTC32Q5I0X7 151 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 GAGE10A6NGK3 116 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
TPM1-201ENST00000267996 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
TPM1-201ENST00000267996 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
TPM1-201ENST00000267996 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
TPM1-201ENST00000267996 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
TPM1-201ENST00000267996 H7C2G1 150 aa10.73□□□□□ -0.69
TPM1-201ENST00000267996 NDUFC2O95298 119 aa10.73□□□□□ -0.69
TPM1-201ENST00000267996 TRAV13-2A0A0B4J235 113 aa10.73□□□□□ -0.69
TPM1-201ENST00000267996 LINC00337Q8N6G1 96 aa10.73□□□□□ -0.69
TPM1-201ENST00000267996 WWC2-AS2Q96NR7 200 aa10.73□□□□□ -0.69
TPM1-201ENST00000267996 SLPIP03973 132 aa10.72□□□□□ -0.69
TPM1-201ENST00000267996 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
TPM1-201ENST00000267996 Q1RN00 199 aa10.71□□□□□ -0.69
TPM1-201ENST00000267996 LYRM7Q5U5X0 104 aa10.71□□□□□ -0.69
TPM1-201ENST00000267996 TGP01266 2768 aa10.7□□□□□ -0.7
TPM1-201ENST00000267996 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
TPM1-201ENST00000267996 TRIAP1O43715 76 aa10.69□□□□□ -0.7
TPM1-201ENST00000267996 PSMB2P49721 201 aa10.69□□□□□ -0.7
TPM1-201ENST00000267996 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
TPM1-201ENST00000267996 WFDC2Q14508 124 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms