RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
SSBP1-201ENST00000265304 TRBV30A0A0K0K1B3 111 aa9.19□□□□□ -0.94
SSBP1-201ENST00000265304 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
SSBP1-201ENST00000265304 Q6ZRU5 148 aa9.19□□□□□ -0.94
SSBP1-201ENST00000265304 Q6ZSA8 131 aa9.19□□□□□ -0.94
SSBP1-201ENST00000265304 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
SSBP1-201ENST00000265304 NDUFA1O15239 70 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 CAMK2N2Q96S95 79 aa9.18□□□□□ -0.94
SSBP1-201ENST00000265304 PRSS2P07478 247 aa9.17□□□□□ -0.94
SSBP1-201ENST00000265304 FUSP35637 526 aaKnown RBP eCLIP9.17□□□□□ -0.945e-7■□□□□ 8.7
SSBP1-201ENST00000265304 KRTAP10-1P60331 282 aa9.17□□□□□ -0.94
SSBP1-201ENST00000265304 CIRBPQ14011 172 aaKnown RBP9.17□□□□□ -0.94
SSBP1-201ENST00000265304 SFTA2Q6UW10 78 aa9.17□□□□□ -0.94
SSBP1-201ENST00000265304 C20orf202A1L168 122 aa9.16□□□□□ -0.94
SSBP1-201ENST00000265304 C16orf90A8MZG2 172 aa9.16□□□□□ -0.94
SSBP1-201ENST00000265304 C2orf82Q6UX34 121 aa9.16□□□□□ -0.94
SSBP1-201ENST00000265304 ZNF625Q96I27 306 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-201ENST00000265304 C6orf48Q9UBA6 75 aa9.16□□□□□ -0.94
SSBP1-201ENST00000265304 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
SSBP1-201ENST00000265304 E9PLD3 99 aa9.15□□□□□ -0.94
SSBP1-201ENST00000265304 LEPROTO15243 131 aa9.15□□□□□ -0.94
SSBP1-201ENST00000265304 CKS1BP61024 79 aa9.15□□□□□ -0.94
SSBP1-201ENST00000265304 TOMM7Q9P0U1 55 aa9.15□□□□□ -0.94
SSBP1-201ENST00000265304 PLEKHB2Q96CS7 222 aa9.14□□□□□ -0.95
SSBP1-201ENST00000265304 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
SSBP1-201ENST00000265304 EPM2AB3EWF7 344 aa9.13□□□□□ -0.95
SSBP1-201ENST00000265304 HERVK_113P61574 105 aa9.13□□□□□ -0.95
SSBP1-201ENST00000265304 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
SSBP1-201ENST00000265304 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
SSBP1-201ENST00000265304 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
SSBP1-201ENST00000265304 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
SSBP1-201ENST00000265304 NDUFC2-KCTD14E9PQ53 114 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 J3QQQ9 107 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 NMUP48645 174 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 TSPEAR-AS2P59090 65 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-201ENST00000265304 STPG4Q8N801 248 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
SSBP1-201ENST00000265304 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
SSBP1-201ENST00000265304 HERV-K104P63124 156 aa9.1□□□□□ -0.95
SSBP1-201ENST00000265304 COX17Q14061 63 aa9.1□□□□□ -0.95
SSBP1-201ENST00000265304 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
SSBP1-201ENST00000265304 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
SSBP1-201ENST00000265304 LINC00474Q9P2X8 69 aa9.09□□□□□ -0.95
SSBP1-201ENST00000265304 NDUFA12Q9UI09 145 aa9.09□□□□□ -0.95
SSBP1-201ENST00000265304 A0A096LNI7 61 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 PANO1I0J062 215 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 XGP55808 180 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 C9orf116Q5BN46 136 aaPredicted RBP9.08□□□□□ -0.96
SSBP1-201ENST00000265304 Q6ZRP5 223 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
SSBP1-201ENST00000265304 MYMXA0A1B0GTQ4 84 aa9.07□□□□□ -0.96
SSBP1-201ENST00000265304 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
SSBP1-201ENST00000265304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-201ENST00000265304 SCGB1D1O95968 90 aa9.06□□□□□ -0.96
SSBP1-201ENST00000265304 ATOH7Q8N100 152 aa9.06□□□□□ -0.96
SSBP1-201ENST00000265304 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
SSBP1-201ENST00000265304 ERG28Q9UKR5 140 aa9.06□□□□□ -0.96
SSBP1-201ENST00000265304 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
SSBP1-201ENST00000265304 KIAA1109Q2LD37 5005 aa9.05□□□□□ -0.96
SSBP1-201ENST00000265304 HSPG2P98160 4391 aa9.05□□□□□ -0.96
SSBP1-201ENST00000265304 LGALS3P17931 250 aaKnown RBP9.04□□□□□ -0.96
SSBP1-201ENST00000265304 PYY3Q5JQD4 70 aa9.04□□□□□ -0.96
SSBP1-201ENST00000265304 RYR1P21817 5038 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 MAJINQ3KP22 176 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
SSBP1-201ENST00000265304 A0A087WYN8 130 aa9.02□□□□□ -0.97
SSBP1-201ENST00000265304 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.97
SSBP1-201ENST00000265304 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
SSBP1-201ENST00000265304 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
SSBP1-201ENST00000265304 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
SSBP1-201ENST00000265304 TIMM17BO60830 172 aa9.01□□□□□ -0.97
SSBP1-201ENST00000265304 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
SSBP1-201ENST00000265304 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
SSBP1-201ENST00000265304 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
SSBP1-201ENST00000265304 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
SSBP1-201ENST00000265304 C4orf48Q5BLP8 95 aa9□□□□□ -0.97
SSBP1-201ENST00000265304 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
SSBP1-201ENST00000265304 LITAFQ99732 161 aa9□□□□□ -0.97
SSBP1-201ENST00000265304 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 SMIM13P0DJ93 91 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
SSBP1-201ENST00000265304 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
SSBP1-201ENST00000265304 ZNF815PA8K554 130 aa8.98□□□□□ -0.97
SSBP1-201ENST00000265304 DLEU1O43261 78 aa8.98□□□□□ -0.97
SSBP1-201ENST00000265304 PFN2P35080 140 aa8.98□□□□□ -0.97
SSBP1-201ENST00000265304 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
SSBP1-201ENST00000265304 BOD1L2Q8IYS8 172 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms