RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 STAB2Q8WWQ8 2551 aa6.44□□□□□ -1.38
SSR3-201ENST00000265044 ESRGQ1W209 222 aa6.43□□□□□ -1.38
SSR3-201ENST00000265044 IFITM1P13164 125 aa6.43□□□□□ -1.38
SSR3-201ENST00000265044 MIAQ16674 131 aa6.43□□□□□ -1.38
SSR3-201ENST00000265044 A0A087WZ39 114 aa6.43□□□□□ -1.38
SSR3-201ENST00000265044 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
SSR3-201ENST00000265044 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 CFC1P0CG37 223 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 S100A7L2Q5SY68 101 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 IGHV3OR16-9A0A0B4J2B5 98 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 H3BMG7 143 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 SPANXB1Q9NS25 103 aaPredicted RBP6.42□□□□□ -1.38
SSR3-201ENST00000265044 SNCGO76070 127 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 DPH3Q96FX2 82 aa6.42□□□□□ -1.38
SSR3-201ENST00000265044 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
SSR3-201ENST00000265044 RMI2Q96E14 147 aa6.41□□□□□ -1.38
SSR3-201ENST00000265044 TRAV8-4A0A0B4J246 113 aa6.41□□□□□ -1.38
SSR3-201ENST00000265044 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
SSR3-201ENST00000265044 J3QR89 54 aa6.4□□□□□ -1.38
SSR3-201ENST00000265044 LINC00308Q8TCZ7 52 aa6.4□□□□□ -1.38
SSR3-201ENST00000265044 VPS25Q9BRG1 176 aa6.4□□□□□ -1.38
SSR3-201ENST00000265044 DNAL4O96015 105 aa6.4□□□□□ -1.39
SSR3-201ENST00000265044 CXCL5P42830 114 aa6.4□□□□□ -1.39
SSR3-201ENST00000265044 GAGE2EQ4V326 116 aa6.4□□□□□ -1.39
SSR3-201ENST00000265044 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.39
SSR3-201ENST00000265044 K7EP34 96 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 H3BNG1 76 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 LECT2O14960 151 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 TM2D3Q9BRN9 247 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
SSR3-201ENST00000265044 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
SSR3-201ENST00000265044 TSPAN13O95857 204 aa6.38□□□□□ -1.39
SSR3-201ENST00000265044 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
SSR3-201ENST00000265044 TRAV13-2A0A0B4J235 113 aa6.38□□□□□ -1.39
SSR3-201ENST00000265044 Q8IZM0 81 aa6.38□□□□□ -1.39
SSR3-201ENST00000265044 C9JAW5 83 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 K7ERU9 68 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 LURAP1LQ8IV03 231 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 B9D2Q9BPU9 175 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 TIMM17BO60830 172 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 C6orf223Q8N319 242 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 SPANXDQ9BXN6 97 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
SSR3-201ENST00000265044 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
SSR3-201ENST00000265044 TRBV20-1A0A075B6N2 111 aa6.36□□□□□ -1.39
SSR3-201ENST00000265044 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SSR3-201ENST00000265044 RPL18AQ02543 176 aaKnown RBP6.36□□□□□ -1.39
SSR3-201ENST00000265044 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
SSR3-201ENST00000265044 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
SSR3-201ENST00000265044 ENHOQ6UWT2 76 aa6.35□□□□□ -1.39
SSR3-201ENST00000265044 NHLRC4P0CG21 123 aaPredicted RBP6.35□□□□□ -1.39
SSR3-201ENST00000265044 M0R2N4 97 aa6.34□□□□□ -1.39
SSR3-201ENST00000265044 NCR3O14931 201 aa6.34□□□□□ -1.39
SSR3-201ENST00000265044 LINC00588Q9Y4M8 146 aa6.34□□□□□ -1.39
SSR3-201ENST00000265044 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
SSR3-201ENST00000265044 CLEC2BQ92478 149 aa6.33□□□□□ -1.4
SSR3-201ENST00000265044 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
SSR3-201ENST00000265044 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
SSR3-201ENST00000265044 NKAPP1Q8N9T2 125 aa6.33□□□□□ -1.4
SSR3-201ENST00000265044 SYCNQ0VAF6 134 aa6.32□□□□□ -1.4
SSR3-201ENST00000265044 FOXI1Q12951 378 aa6.32□□□□□ -1.4
SSR3-201ENST00000265044 A0A1B0GV72 72 aa6.32□□□□□ -1.4
SSR3-201ENST00000265044 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.32□□□□□ -1.4
SSR3-201ENST00000265044 TCL1BO95988 128 aa6.32□□□□□ -1.4
SSR3-201ENST00000265044 WFDC2Q14508 124 aa6.32□□□□□ -1.4
SSR3-201ENST00000265044 F8W1H4 67 aa6.31□□□□□ -1.4
SSR3-201ENST00000265044 TRIAP1O43715 76 aa6.31□□□□□ -1.4
SSR3-201ENST00000265044 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
SSR3-201ENST00000265044 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
SSR3-201ENST00000265044 SLC25A20O43772 301 aa6.3□□□□□ -1.4
SSR3-201ENST00000265044 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
SSR3-201ENST00000265044 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
SSR3-201ENST00000265044 LITAFQ99732 161 aa6.3□□□□□ -1.4
SSR3-201ENST00000265044 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 TMEM126AQ9H061 195 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 LINC01561Q8N1V8 128 aa6.29□□□□□ -1.4
SSR3-201ENST00000265044 COX17Q14061 63 aa6.28□□□□□ -1.4
SSR3-201ENST00000265044 LINC01620Q4KN68 170 aa6.28□□□□□ -1.4
SSR3-201ENST00000265044 Q6ZRU5 148 aa6.28□□□□□ -1.4
SSR3-201ENST00000265044 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
SSR3-201ENST00000265044 OCIAD2Q56VL3 154 aa6.27□□□□□ -1.41
SSR3-201ENST00000265044 TTC32Q5I0X7 151 aa6.27□□□□□ -1.41
SSR3-201ENST00000265044 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
SSR3-201ENST00000265044 LY6G6CO95867 125 aa6.27□□□□□ -1.41
SSR3-201ENST00000265044 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
SSR3-201ENST00000265044 H0YGX0 51 aa6.25□□□□□ -1.41
SSR3-201ENST00000265044 SMIM11BQ8TCY0 68 aa6.25□□□□□ -1.41
SSR3-201ENST00000265044 KIAA0087Q14695 138 aa6.25□□□□□ -1.41
SSR3-201ENST00000265044 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
SSR3-201ENST00000265044 LINC00337Q8N6G1 96 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms