RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CCKP06307 115 aa11.8□□□□□ -0.52
PHRF1-201ENST00000264555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
PHRF1-201ENST00000264555 IGLV5-39A0A0G2JS06 123 aa11.8□□□□□ -0.52
PHRF1-201ENST00000264555 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
PHRF1-201ENST00000264555 AGRNO00468 2067 aa11.8□□□□□ -0.52
PHRF1-201ENST00000264555 ANKRD17O75179 2603 aaKnown RBP11.79□□□□□ -0.52
PHRF1-201ENST00000264555 TRANK1O15050 2925 aa11.79□□□□□ -0.52
PHRF1-201ENST00000264555 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
PHRF1-201ENST00000264555 MTORP42345 2549 aa11.78□□□□□ -0.52
PHRF1-201ENST00000264555 Q8N814 137 aa11.77□□□□□ -0.53
PHRF1-201ENST00000264555 LYPD5Q6UWN5 251 aa11.76□□□□□ -0.53
PHRF1-201ENST00000264555 CHKB-CPT1BH3BT56 60 aa11.76□□□□□ -0.53
PHRF1-201ENST00000264555 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
PHRF1-201ENST00000264555 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
PHRF1-201ENST00000264555 C3orf22Q8N5N4 141 aa11.75□□□□□ -0.53
PHRF1-201ENST00000264555 A0A087WYN8 130 aa11.75□□□□□ -0.53
PHRF1-201ENST00000264555 H0Y9J4 135 aa11.75□□□□□ -0.53
PHRF1-201ENST00000264555 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
PHRF1-201ENST00000264555 M0QXV9 152 aa11.74□□□□□ -0.53
PHRF1-201ENST00000264555 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
PHRF1-201ENST00000264555 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
PHRF1-201ENST00000264555 Q6Q795 121 aa11.73□□□□□ -0.53
PHRF1-201ENST00000264555 C20orf197Q8N268 126 aa11.73□□□□□ -0.53
PHRF1-201ENST00000264555 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
PHRF1-201ENST00000264555 Q9UF83 564 aa11.72□□□□□ -0.53
PHRF1-201ENST00000264555 F8WDY8 70 aa11.71□□□□□ -0.53
PHRF1-201ENST00000264555 Q6JHZ5 121 aa11.71□□□□□ -0.53
PHRF1-201ENST00000264555 C6orf223Q8N319 242 aa11.71□□□□□ -0.53
PHRF1-201ENST00000264555 BRK1Q8WUW1 75 aa11.71□□□□□ -0.53
PHRF1-201ENST00000264555 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
PHRF1-201ENST00000264555 A0A096LNI7 61 aa11.71□□□□□ -0.53
PHRF1-201ENST00000264555 USP17L23D6RBM5 183 aa11.71□□□□□ -0.54
PHRF1-201ENST00000264555 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
PHRF1-201ENST00000264555 WFDC10BQ8IUB3 73 aa11.7□□□□□ -0.54
PHRF1-201ENST00000264555 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 NDUFC2-KCTD14E9PQ53 114 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 LINC00337Q8N6G1 96 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 FAM236DA0A1B0GTK5 79 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 FAM236CP0DP71 79 aa11.69□□□□□ -0.54
PHRF1-201ENST00000264555 SERP2Q8N6R1 65 aa11.68□□□□□ -0.54
PHRF1-201ENST00000264555 X6R8D5 127 aa11.67□□□□□ -0.54
PHRF1-201ENST00000264555 LAMA3Q16787 3333 aa11.66□□□□□ -0.54
PHRF1-201ENST00000264555 A0A096LNT2 108 aa11.66□□□□□ -0.54
PHRF1-201ENST00000264555 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
PHRF1-201ENST00000264555 EPG5Q9HCE0 2579 aa11.66□□□□□ -0.54
PHRF1-201ENST00000264555 ACANP16112 2415 aa11.65□□□□□ -0.54
PHRF1-201ENST00000264555 M0R2N4 97 aa11.64□□□□□ -0.55
PHRF1-201ENST00000264555 A8MTW9 85 aa11.63□□□□□ -0.55
PHRF1-201ENST00000264555 COX7CP15954 63 aa11.63□□□□□ -0.55
PHRF1-201ENST00000264555 NUPR2A6NF83 97 aa11.62□□□□□ -0.55
PHRF1-201ENST00000264555 ATP5EP56381 51 aaPredicted RBP11.62□□□□□ -0.55
PHRF1-201ENST00000264555 PPDPFQ9H3Y8 114 aa11.62□□□□□ -0.55
PHRF1-201ENST00000264555 BRCA2P51587 3418 aa11.62□□□□□ -0.55
PHRF1-201ENST00000264555 LINC00575Q6W349 94 aa11.61□□□□□ -0.55
PHRF1-201ENST00000264555 CCDC179H3BU77 68 aa11.61□□□□□ -0.55
PHRF1-201ENST00000264555 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
PHRF1-201ENST00000264555 FASNP49327 2511 aaKnown RBP11.6□□□□□ -0.55
PHRF1-201ENST00000264555 Q6ZRU5 148 aa11.6□□□□□ -0.55
PHRF1-201ENST00000264555 PLAC8L1A1L4L8 177 aa11.59□□□□□ -0.55
PHRF1-201ENST00000264555 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
PHRF1-201ENST00000264555 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
PHRF1-201ENST00000264555 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
PHRF1-201ENST00000264555 PRO0461Q9UI25 63 aa11.58□□□□□ -0.56
PHRF1-201ENST00000264555 H3BNG1 76 aa11.57□□□□□ -0.56
PHRF1-201ENST00000264555 NDUFC1O43677 76 aa11.57□□□□□ -0.56
PHRF1-201ENST00000264555 SBSPONQ8IVN8 264 aa11.57□□□□□ -0.56
PHRF1-201ENST00000264555 SOSTDC1Q6X4U4 206 aa11.56□□□□□ -0.56
PHRF1-201ENST00000264555 SVIPQ8NHG7 77 aa11.56□□□□□ -0.56
PHRF1-201ENST00000264555 MUC4Q99102 2169 aa11.56□□□□□ -0.56
PHRF1-201ENST00000264555 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
PHRF1-201ENST00000264555 CDIP1Q9H305 208 aa11.56□□□□□ -0.56
PHRF1-201ENST00000264555 FAM19A3Q7Z5A8 133 aa11.55□□□□□ -0.56
PHRF1-201ENST00000264555 C1orf137Q5JT78 98 aa11.55□□□□□ -0.56
PHRF1-201ENST00000264555 MPLKIPQ8TAP9 179 aa11.54□□□□□ -0.56
PHRF1-201ENST00000264555 MRPL55Q7Z7F7 128 aaKnown RBP11.54□□□□□ -0.56
PHRF1-201ENST00000264555 ESRGQ1W209 222 aa11.54□□□□□ -0.56
PHRF1-201ENST00000264555 V9GYY9 64 aa11.54□□□□□ -0.56
PHRF1-201ENST00000264555 PRYO14603 147 aa11.54□□□□□ -0.56
PHRF1-201ENST00000264555 IGKV4-1P06312 121 aa11.53□□□□□ -0.56
PHRF1-201ENST00000264555 LY6G6CO95867 125 aa11.52□□□□□ -0.56
PHRF1-201ENST00000264555 SEC61GP60059 68 aa11.52□□□□□ -0.56
PHRF1-201ENST00000264555 Q8NAQ8 132 aa11.52□□□□□ -0.56
PHRF1-201ENST00000264555 A0A087WVE0 104 aa11.51□□□□□ -0.57
PHRF1-201ENST00000264555 LITAFQ99732 161 aa11.51□□□□□ -0.57
PHRF1-201ENST00000264555 LRCOL1A6NCL2 159 aa11.51□□□□□ -0.57
PHRF1-201ENST00000264555 CSNK1G2-AS1Q8NCQ2 148 aa11.51□□□□□ -0.57
PHRF1-201ENST00000264555 SPTSSBQ8NFR3 76 aa11.51□□□□□ -0.57
PHRF1-201ENST00000264555 LINC00846Q9NV44 126 aa11.5□□□□□ -0.57
PHRF1-201ENST00000264555 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
PHRF1-201ENST00000264555 SNURFQ9Y675 71 aa11.5□□□□□ -0.57
PHRF1-201ENST00000264555 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
PHRF1-201ENST00000264555 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
PHRF1-201ENST00000264555 KRTAP24-1Q3LI83 254 aa11.48□□□□□ -0.57
PHRF1-201ENST00000264555 TRAV7A0A075B6U4 112 aa11.47□□□□□ -0.57
PHRF1-201ENST00000264555 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
PHRF1-201ENST00000264555 FAM218AQ96MZ4 157 aa11.47□□□□□ -0.57
PHRF1-201ENST00000264555 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.58
PHRF1-201ENST00000264555 Q8N3U1 123 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms