RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 LINC01561Q8N1V8 128 aa12.09□□□□□ -0.47
SSB-201ENST00000260956 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
SSB-201ENST00000260956 H7C2G1 150 aa12.08□□□□□ -0.47
SSB-201ENST00000260956 Q8N3U1 123 aa12.08□□□□□ -0.48
SSB-201ENST00000260956 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
SSB-201ENST00000260956 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
SSB-201ENST00000260956 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
SSB-201ENST00000260956 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
SSB-201ENST00000260956 SCGB1C2P0DMR2 95 aa12.05□□□□□ -0.48
SSB-201ENST00000260956 Q1RN00 199 aa12.05□□□□□ -0.48
SSB-201ENST00000260956 VPS25Q9BRG1 176 aa12.05□□□□□ -0.48
SSB-201ENST00000260956 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
SSB-201ENST00000260956 SS18Q15532 418 aa12.04□□□□□ -0.48
SSB-201ENST00000260956 COPS9Q8WXC6 57 aa12.04□□□□□ -0.48
SSB-201ENST00000260956 STARD9Q9P2P6 4700 aa12.04□□□□□ -0.48
SSB-201ENST00000260956 TENM2Q9NT68 2774 aa12.04□□□□□ -0.48
SSB-201ENST00000260956 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
SSB-201ENST00000260956 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 IBA57-AS1B1ANH7 110 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 XCL1P47992 114 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 LELP1Q5T871 98 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 CLPSL2Q6UWE3 100 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 TEN1Q86WV5 123 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 CARD19Q96LW7 228 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 WWC2-AS2Q96NR7 200 aa12.03□□□□□ -0.48
SSB-201ENST00000260956 ATXN8Q156A1 80 aa12.02□□□□□ -0.49
SSB-201ENST00000260956 Q8IZM0 81 aa12.02□□□□□ -0.49
SSB-201ENST00000260956 TOMM7Q9P0U1 55 aa12.02□□□□□ -0.49
SSB-201ENST00000260956 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
SSB-201ENST00000260956 KIAA0087Q14695 138 aa12.01□□□□□ -0.49
SSB-201ENST00000260956 LINC00269Q8N2A0 174 aa12.01□□□□□ -0.49
SSB-201ENST00000260956 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
SSB-201ENST00000260956 FOXI1Q12951 378 aa12□□□□□ -0.49
SSB-201ENST00000260956 CD164L2Q6UWJ8 174 aa12□□□□□ -0.49
SSB-201ENST00000260956 C11orf68Q9H3H3 251 aaKnown RBP12□□□□□ -0.49
SSB-201ENST00000260956 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
SSB-201ENST00000260956 C9JAW5 83 aa12□□□□□ -0.49
SSB-201ENST00000260956 LST1O00453 97 aa12□□□□□ -0.49
SSB-201ENST00000260956 SLC25A20O43772 301 aa12□□□□□ -0.49
SSB-201ENST00000260956 IGKV2D-28P01615 120 aa12□□□□□ -0.49
SSB-201ENST00000260956 KMT2CQ8NEZ4 4911 aaKnown RBP11.99□□□□□ -0.49
SSB-201ENST00000260956 REG3AQ06141 175 aa11.99□□□□□ -0.49
SSB-201ENST00000260956 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
SSB-201ENST00000260956 PRR34Q9NV39 138 aa11.99□□□□□ -0.49
SSB-201ENST00000260956 HTN3P15516 51 aa11.98□□□□□ -0.49
SSB-201ENST00000260956 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
SSB-201ENST00000260956 H3BNG1 76 aa11.97□□□□□ -0.49
SSB-201ENST00000260956 CCL18P55774 89 aa11.97□□□□□ -0.49
SSB-201ENST00000260956 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
SSB-201ENST00000260956 CLEC2BQ92478 149 aa11.97□□□□□ -0.49
SSB-201ENST00000260956 LINC00337Q8N6G1 96 aa11.97□□□□□ -0.49
SSB-201ENST00000260956 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.49
SSB-201ENST00000260956 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
SSB-201ENST00000260956 J3QR89 54 aa11.95□□□□□ -0.5
SSB-201ENST00000260956 COX7A2LO14548 114 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 COX6CP09669 75 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 LYPD5Q6UWN5 251 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 MUC7Q8TAX7 377 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 SND1-IT1Q9HBX3 110 aa11.94□□□□□ -0.5
SSB-201ENST00000260956 LINC00158P58513 81 aa11.93□□□□□ -0.5
SSB-201ENST00000260956 C6orf226Q5I0X4 101 aa11.93□□□□□ -0.5
SSB-201ENST00000260956 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 Q6ZTC4 211 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 PLECQ15149 4684 aaKnown RBP11.91□□□□□ -0.5
SSB-201ENST00000260956 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 H3BT86 120 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 CXCL5P42830 114 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
SSB-201ENST00000260956 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
SSB-201ENST00000260956 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
SSB-201ENST00000260956 CDIP1Q9H305 208 aa11.9□□□□□ -0.5
SSB-201ENST00000260956 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
SSB-201ENST00000260956 PFN2P35080 140 aa11.89□□□□□ -0.51
SSB-201ENST00000260956 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
SSB-201ENST00000260956 KLK5Q9Y337 293 aaPredicted RBP11.89□□□□□ -0.51
SSB-201ENST00000260956 CRPP02741 224 aa11.89□□□□□ -0.51
SSB-201ENST00000260956 PCP4P48539 62 aa11.89□□□□□ -0.51
SSB-201ENST00000260956 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
SSB-201ENST00000260956 LYSTQ99698 3801 aa11.88□□□□□ -0.51
SSB-201ENST00000260956 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
SSB-201ENST00000260956 NTN5Q8WTR8 489 aaPredicted RBP11.87□□□□□ -0.51
SSB-201ENST00000260956 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
SSB-201ENST00000260956 KLK12Q9UKR0 248 aa11.87□□□□□ -0.51
SSB-201ENST00000260956 COX17Q14061 63 aa11.86□□□□□ -0.51
SSB-201ENST00000260956 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
SSB-201ENST00000260956 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
SSB-201ENST00000260956 C3orf84H3BNL1 204 aa11.85□□□□□ -0.51
SSB-201ENST00000260956 TRACP01848 142 aa11.85□□□□□ -0.51
SSB-201ENST00000260956 CKS1BP61024 79 aa11.84□□□□□ -0.51
SSB-201ENST00000260956 SMIM11BQ8TCY0 68 aa11.84□□□□□ -0.51
SSB-201ENST00000260956 C22orf24Q9Y442 160 aa11.83□□□□□ -0.52
SSB-201ENST00000260956 C10orf25Q5T742 122 aa11.83□□□□□ -0.52
SSB-201ENST00000260956 CFAP161Q6P656 301 aa11.83□□□□□ -0.52
SSB-201ENST00000260956 RYR3Q15413 4870 aa11.82□□□□□ -0.52
SSB-201ENST00000260956 TEX49A0A1B0GTD5 131 aa11.82□□□□□ -0.52
SSB-201ENST00000260956 MALP21145 153 aa11.82□□□□□ -0.52
SSB-201ENST00000260956 SPAG11BQ08648 103 aa11.82□□□□□ -0.52
SSB-201ENST00000260956 Q8NDZ9 215 aa11.82□□□□□ -0.52
SSB-201ENST00000260956 TRAV8-4A0A0B4J246 113 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 597.3 ms