RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 IGLV5-39A0A0G2JS06 123 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 ZNF843Q8N446 348 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 A0A087WYN8 130 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 FAM222AQ5U5X8 452 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 FAM104AQ969W3 186 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 USP24Q9UPU5 2620 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 A0A1B0GX51 115 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 LCE2CQ5TA81 110 aa3.36□□□□□ -1.87
USP44-201ENST00000258499 LINC00959A0A1B0GUT2 108 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 IBA57-AS1B1ANH7 110 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 HAMPP81172 84 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 PRO0255Q9UI72 69 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 MXRA5Q9NR99 2828 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 FAM240AA0A1B0GVK7 77 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 M0QXV9 152 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 C9orf116Q5BN46 136 aaPredicted RBP3.35□□□□□ -1.87
USP44-201ENST00000258499 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
USP44-201ENST00000258499 ATRQ13535 2644 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
USP44-201ENST00000258499 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 Q6Q795 121 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 SMR3AQ99954 134 aa3.35□□□□□ -1.87
USP44-201ENST00000258499 FLNBO75369 2602 aaKnown RBP3.34□□□□□ -1.87
USP44-201ENST00000258499 A0A087WVE0 104 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 A0A096LNT2 108 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 NHLRC4P0CG21 123 aaPredicted RBP3.34□□□□□ -1.87
USP44-201ENST00000258499 FHL2Q14192 279 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 CHCHD10Q8WYQ3 142 aaPredicted RBP3.34□□□□□ -1.87
USP44-201ENST00000258499 UBL5Q9BZL1 73 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 RPL18AQ02543 176 aaKnown RBP3.34□□□□□ -1.87
USP44-201ENST00000258499 C6orf99Q4VX62 202 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 SHISA2Q6UWI4 295 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 LRRC75A-AS1Q8N1F1 130 aa3.34□□□□□ -1.87
USP44-201ENST00000258499 RPL28P46779 137 aaKnown RBP3.34□□□□□ -1.88
USP44-201ENST00000258499 REG3AQ06141 175 aa3.34□□□□□ -1.88
USP44-201ENST00000258499 SPAG11BQ08648 103 aa3.34□□□□□ -1.88
USP44-201ENST00000258499 A0A087WZ39 114 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 hADV29S1A0JD25 119 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 FSHBP01225 129 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 IGLV1-51P01701 117 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 WFDC9Q8NEX5 89 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 F8P00451 2351 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 HELZ2Q9BYK8 2649 aaKnown RBP3.33□□□□□ -1.88
USP44-201ENST00000258499 TRAV23DV6A0A075B6W5 121 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 ATOX1O00244 68 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 CXCL5P42830 114 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 KLK5Q9Y337 293 aaPredicted RBP3.33□□□□□ -1.88
USP44-201ENST00000258499 A8MTW9 85 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 ZNF561-AS1K7EIQ3 104 aa3.33□□□□□ -1.88
USP44-201ENST00000258499 IGKV2-28A0A075B6P5 120 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 IGKV2D-28P01615 120 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 UQCRQO14949 82 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 Q8N3U1 123 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 LINC00846Q9NV44 126 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 UBR5O95071 2799 aaPredicted RBP3.32□□□□□ -1.88
USP44-201ENST00000258499 SETXQ7Z333 2677 aaKnown RBP3.32□□□□□ -1.88
USP44-201ENST00000258499 APOC4P55056 127 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 DSCR8Q96T75 97 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 IMUPQ9GZP8 106 aa3.32□□□□□ -1.88
USP44-201ENST00000258499 CSMD2Q7Z408 3487 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 TMEM256-PLSCR3K7ERE1 68 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
USP44-201ENST00000258499 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 RBM3P98179 157 aaKnown RBP3.31□□□□□ -1.88
USP44-201ENST00000258499 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 CD164L2Q6UWJ8 174 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 C6orf223Q8N319 242 aa3.31□□□□□ -1.88
USP44-201ENST00000258499 IGHV4-28A0A0C4DH34 117 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 USP17L23D6RBM5 183 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 Q8IZM0 81 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 NIPBLQ6KC79 2804 aaeCLIP3.3□□□□□ -1.88
USP44-201ENST00000258499 J3QKU1 62 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 GHRHP01286 108 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 C9orf129Q5T035 196 aaKnown RBP3.3□□□□□ -1.88
USP44-201ENST00000258499 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 SCXQ7RTU7 201 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 ITPR2Q14571 2701 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 Q6ZQY7 126 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 DEFB105AQ8NG35 78 aa3.3□□□□□ -1.88
USP44-201ENST00000258499 PLAC8L1A1L4L8 177 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 COX7CP15954 63 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 HILS1P60008 231 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 UNC79Q9P2D8 2635 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 CYSRT1A8MQ03 144 aa3.29□□□□□ -1.88
USP44-201ENST00000258499 INAFM1C9JVW0 142 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms