RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
CDK7-201ENST00000256443 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
CDK7-201ENST00000256443 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
CDK7-201ENST00000256443 H3BRM9 83 aa8.13□□□□□ -1.11
CDK7-201ENST00000256443 CXCL5P42830 114 aa8.13□□□□□ -1.11
CDK7-201ENST00000256443 C10orf25Q5T742 122 aa8.13□□□□□ -1.11
CDK7-201ENST00000256443 BAGE3Q86Y29 109 aa8.13□□□□□ -1.11
CDK7-201ENST00000256443 SMIM1B2RUZ4 78 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 IGLC3P0DOY3 106 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 NDUFA6P56556 154 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 COLCA2A8K830 154 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 HSBP1O75506 76 aa8.12□□□□□ -1.11
CDK7-201ENST00000256443 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
CDK7-201ENST00000256443 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
CDK7-201ENST00000256443 Q6ZRP5 223 aa8.11□□□□□ -1.11
CDK7-201ENST00000256443 F8VRH5 84 aa8.1□□□□□ -1.11
CDK7-201ENST00000256443 C9orf116Q5BN46 136 aaPredicted RBP8.1□□□□□ -1.11
CDK7-201ENST00000256443 COX7B2Q8TF08 81 aa8.1□□□□□ -1.11
CDK7-201ENST00000256443 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
CDK7-201ENST00000256443 SPINK8P0C7L1 97 aa8.09□□□□□ -1.11
CDK7-201ENST00000256443 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
CDK7-201ENST00000256443 TRAV12-1A0A0B4J245 112 aa8.08□□□□□ -1.12
CDK7-201ENST00000256443 A0A1W2PNN7 141 aa8.08□□□□□ -1.12
CDK7-201ENST00000256443 ZNF22P17026 224 aaPredicted RBP8.08□□□□□ -1.12
CDK7-201ENST00000256443 GAGE2EQ4V326 116 aa8.08□□□□□ -1.12
CDK7-201ENST00000256443 GAGE2DQ9UEU5 116 aa8.08□□□□□ -1.12
CDK7-201ENST00000256443 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
CDK7-201ENST00000256443 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
CDK7-201ENST00000256443 SERF1AO75920 110 aa8.06□□□□□ -1.12
CDK7-201ENST00000256443 FAM19A2Q8N3H0 131 aa8.06□□□□□ -1.12
CDK7-201ENST00000256443 C11orf86A6NJI1 115 aa8.05□□□□□ -1.12
CDK7-201ENST00000256443 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
CDK7-201ENST00000256443 PRR3P79522 188 aaKnown RBP8.05□□□□□ -1.12
CDK7-201ENST00000256443 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
CDK7-201ENST00000256443 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
CDK7-201ENST00000256443 SCO1O75880 301 aa8.04□□□□□ -1.12
CDK7-201ENST00000256443 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
CDK7-201ENST00000256443 LINC00310P59036 64 aa8.03□□□□□ -1.12
CDK7-201ENST00000256443 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
CDK7-201ENST00000256443 OXTP01178 125 aa8.03□□□□□ -1.12
CDK7-201ENST00000256443 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
CDK7-201ENST00000256443 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
CDK7-201ENST00000256443 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
CDK7-201ENST00000256443 HSPB8Q9UJY1 196 aa8.03□□□□□ -1.12
CDK7-201ENST00000256443 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
CDK7-201ENST00000256443 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
CDK7-201ENST00000256443 J3QL48 77 aa8.02□□□□□ -1.13
CDK7-201ENST00000256443 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
CDK7-201ENST00000256443 M0QXV9 152 aa8.01□□□□□ -1.13
CDK7-201ENST00000256443 ODF1Q14990 250 aa8.01□□□□□ -1.13
CDK7-201ENST00000256443 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
CDK7-201ENST00000256443 TMEM223A0PJW6 202 aa8□□□□□ -1.13
CDK7-201ENST00000256443 NUPR1O60356 82 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BKO60814 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BJP06899 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BOP23527 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BBP33778 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BDP58876 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BCP62807 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST2H2BEQ16778 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST2H2BFQ5QNW6 126 aaPredicted RBP8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BHQ93079 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BNQ99877 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 HIST1H2BMQ99879 126 aa8□□□□□ -1.13
CDK7-201ENST00000256443 H0Y8G0 127 aa7.99□□□□□ -1.13
CDK7-201ENST00000256443 XAGE1AQ9HD64 81 aa7.99□□□□□ -1.13
CDK7-201ENST00000256443 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
CDK7-201ENST00000256443 FABP4P15090 132 aa7.98□□□□□ -1.13
CDK7-201ENST00000256443 COX17Q14061 63 aa7.98□□□□□ -1.13
CDK7-201ENST00000256443 SPINK6Q6UWN8 80 aa7.98□□□□□ -1.13
CDK7-201ENST00000256443 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
CDK7-201ENST00000256443 PLNP26678 52 aa7.97□□□□□ -1.13
CDK7-201ENST00000256443 UBE2BP63146 152 aa7.97□□□□□ -1.13
CDK7-201ENST00000256443 ERG28Q9UKR5 140 aa7.97□□□□□ -1.13
CDK7-201ENST00000256443 PLA2G2DQ9UNK4 145 aa7.97□□□□□ -1.13
CDK7-201ENST00000256443 S100A1P23297 94 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 LBHQ53QV2 105 aaPredicted RBP7.96□□□□□ -1.13
CDK7-201ENST00000256443 C1orf137Q5JT78 98 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 C22orf24Q9Y442 160 aa7.96□□□□□ -1.13
CDK7-201ENST00000256443 PFN2P35080 140 aa7.95□□□□□ -1.14
CDK7-201ENST00000256443 SRSF9Q13242 221 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDK7-201ENST00000256443 ZNF625Q96I27 306 aaPredicted RBP7.95□□□□□ -1.14
CDK7-201ENST00000256443 DPM2O94777 84 aa7.95□□□□□ -1.14
CDK7-201ENST00000256443 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
CDK7-201ENST00000256443 LRP1Q07954 4544 aaKnown RBP7.94□□□□□ -1.14
CDK7-201ENST00000256443 IGKCP01834 107 aa7.94□□□□□ -1.14
CDK7-201ENST00000256443 HERV-K104P63124 156 aa7.94□□□□□ -1.14
CDK7-201ENST00000256443 REG3GQ6UW15 175 aa7.94□□□□□ -1.14
CDK7-201ENST00000256443 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
CDK7-201ENST00000256443 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
CDK7-201ENST00000256443 IGLV7-43P04211 117 aa7.93□□□□□ -1.14
CDK7-201ENST00000256443 HERVK_113P61574 105 aa7.93□□□□□ -1.14
CDK7-201ENST00000256443 COA6Q5JTJ3 125 aaKnown RBP7.93□□□□□ -1.14
CDK7-201ENST00000256443 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
CDK7-201ENST00000256443 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
CDK7-201ENST00000256443 NKAPP1Q8N9T2 125 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms