RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CCL24O00175 119 aa11.32□□□□□ -0.6
SLC6A8-201ENST00000253122 GYPEP15421 78 aa11.32□□□□□ -0.6
SLC6A8-201ENST00000253122 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
SLC6A8-201ENST00000253122 TMEM256-PLSCR3K7ERE1 68 aa11.31□□□□□ -0.6
SLC6A8-201ENST00000253122 RBM3P98179 157 aaKnown RBP11.31□□□□□ -0.6
SLC6A8-201ENST00000253122 IGLV5-45A0A087WSX0 123 aa11.31□□□□□ -0.6
SLC6A8-201ENST00000253122 DAD1P61803 113 aa11.31□□□□□ -0.6
SLC6A8-201ENST00000253122 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 SCXQ7RTU7 201 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 C11orf72Q8NBR9 251 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 ZNF702PQ9H963 129 aa11.3□□□□□ -0.6
SLC6A8-201ENST00000253122 FAM19A1Q7Z5A9 133 aa11.29□□□□□ -0.6
SLC6A8-201ENST00000253122 C1orf43Q9BWL3 253 aa11.29□□□□□ -0.6
SLC6A8-201ENST00000253122 C1orf158Q8N1D5 194 aa11.29□□□□□ -0.6
SLC6A8-201ENST00000253122 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 C16orf74Q96GX8 76 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 GCN1Q92616 2671 aaKnown RBP11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 TRBV6-8A0A0A6YYG3 113 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 DEFB4AO15263 64 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 CRYGAP11844 174 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 ODF3L2Q3SX64 289 aa11.28□□□□□ -0.6
SLC6A8-201ENST00000253122 C4orf3Q8WVX3 66 aa11.26□□□□□ -0.61
SLC6A8-201ENST00000253122 IGHV4-31P0DP07 118 aa11.26□□□□□ -0.61
SLC6A8-201ENST00000253122 SNURFQ9Y675 71 aa11.26□□□□□ -0.61
SLC6A8-201ENST00000253122 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
SLC6A8-201ENST00000253122 MRAPQ8TCY5 172 aa11.25□□□□□ -0.61
SLC6A8-201ENST00000253122 LINC00269Q8N2A0 174 aa11.25□□□□□ -0.61
SLC6A8-201ENST00000253122 IGKV2-28A0A075B6P5 120 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 FAM236DA0A1B0GTK5 79 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 IGKV2D-28P01615 120 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 CCKP06307 115 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 FAM236CP0DP71 79 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 Q6YL49 198 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
SLC6A8-201ENST00000253122 F5H768 121 aa11.23□□□□□ -0.61
SLC6A8-201ENST00000253122 LINC01600Q96MT4 127 aa11.23□□□□□ -0.61
SLC6A8-201ENST00000253122 LINC00959A0A1B0GUT2 108 aa11.23□□□□□ -0.61
SLC6A8-201ENST00000253122 DPH3Q96FX2 82 aa11.22□□□□□ -0.61
SLC6A8-201ENST00000253122 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
SLC6A8-201ENST00000253122 TRAV25A0A0B4J276 109 aa11.22□□□□□ -0.61
SLC6A8-201ENST00000253122 A0A0U1RQV1 116 aa11.21□□□□□ -0.61
SLC6A8-201ENST00000253122 C9orf116Q5BN46 136 aaPredicted RBP11.21□□□□□ -0.61
SLC6A8-201ENST00000253122 ZANQ9Y493 2812 aa11.21□□□□□ -0.61
SLC6A8-201ENST00000253122 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SLC6A8-201ENST00000253122 CELSR1Q9NYQ6 3014 aa11.2□□□□□ -0.62
SLC6A8-201ENST00000253122 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
SLC6A8-201ENST00000253122 A8MTW9 85 aa11.19□□□□□ -0.62
SLC6A8-201ENST00000253122 A0A087WZ39 114 aa11.19□□□□□ -0.62
SLC6A8-201ENST00000253122 NDUFC2O95298 119 aa11.19□□□□□ -0.62
SLC6A8-201ENST00000253122 Q8N814 137 aa11.19□□□□□ -0.62
SLC6A8-201ENST00000253122 A0A096LNT2 108 aa11.18□□□□□ -0.62
SLC6A8-201ENST00000253122 ATP5EP2Q5VTU8 51 aa11.18□□□□□ -0.62
SLC6A8-201ENST00000253122 LINC01561Q8N1V8 128 aa11.18□□□□□ -0.62
SLC6A8-201ENST00000253122 CRYBG3Q68DQ2 2970 aa11.17□□□□□ -0.62
SLC6A8-201ENST00000253122 TEX15Q9BXT5 2789 aa11.17□□□□□ -0.62
SLC6A8-201ENST00000253122 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
SLC6A8-201ENST00000253122 DEFB105AQ8NG35 78 aa11.17□□□□□ -0.62
SLC6A8-201ENST00000253122 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
SLC6A8-201ENST00000253122 Q6ZQY7 126 aa11.16□□□□□ -0.62
SLC6A8-201ENST00000253122 ATRQ13535 2644 aa11.16□□□□□ -0.62
SLC6A8-201ENST00000253122 SPAG11BQ08648 103 aa11.15□□□□□ -0.62
SLC6A8-201ENST00000253122 CHCHD10Q8WYQ3 142 aaPredicted RBP11.15□□□□□ -0.62
SLC6A8-201ENST00000253122 HELZ2Q9BYK8 2649 aaKnown RBP11.15□□□□□ -0.62
SLC6A8-201ENST00000253122 MPLKIPQ8TAP9 179 aa11.15□□□□□ -0.62
SLC6A8-201ENST00000253122 XAGE1AQ9HD64 81 aa11.15□□□□□ -0.63
SLC6A8-201ENST00000253122 RPS28P62857 69 aaKnown RBP11.14□□□□□ -0.63
SLC6A8-201ENST00000253122 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
SLC6A8-201ENST00000253122 UTP20O75691 2785 aaKnown RBP11.13□□□□□ -0.63
SLC6A8-201ENST00000253122 FHL2Q14192 279 aa11.12□□□□□ -0.63
SLC6A8-201ENST00000253122 CYSTM1Q9H1C7 97 aa11.12□□□□□ -0.63
SLC6A8-201ENST00000253122 PRO0255Q9UI72 69 aa11.12□□□□□ -0.63
SLC6A8-201ENST00000253122 REG3AQ06141 175 aa11.11□□□□□ -0.63
SLC6A8-201ENST00000253122 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
SLC6A8-201ENST00000253122 ZNF561-AS1K7EIQ3 104 aa11.11□□□□□ -0.63
SLC6A8-201ENST00000253122 F8WEM9 126 aa11.11□□□□□ -0.63
SLC6A8-201ENST00000253122 BRK1Q8WUW1 75 aa11.11□□□□□ -0.63
SLC6A8-201ENST00000253122 Q8IZM0 81 aa11.1□□□□□ -0.63
SLC6A8-201ENST00000253122 FBN2P35556 2912 aa11.09□□□□□ -0.63
SLC6A8-201ENST00000253122 DIRC1Q969H9 104 aa11.09□□□□□ -0.63
SLC6A8-201ENST00000253122 RMI2Q96E14 147 aa11.08□□□□□ -0.63
SLC6A8-201ENST00000253122 FLNAP21333 2647 aaKnown RBP11.08□□□□□ -0.64
SLC6A8-201ENST00000253122 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
SLC6A8-201ENST00000253122 TEP1Q99973 2627 aaKnown RBP11.08□□□□□ -0.64
SLC6A8-201ENST00000253122 FSHBP01225 129 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 UNQ6190/PRO20217Q6UXQ8 127 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 UNC79Q9P2D8 2635 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 NF1P21359 2839 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 TRAV7A0A075B6U4 112 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 DNAJC9-AS1A6NH13 148 aa11.07□□□□□ -0.64
SLC6A8-201ENST00000253122 NREPQ16612 68 aa11.06□□□□□ -0.64
SLC6A8-201ENST00000253122 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
SLC6A8-201ENST00000253122 CR1P17927 2039 aa11.06□□□□□ -0.64
SLC6A8-201ENST00000253122 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
SLC6A8-201ENST00000253122 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
SLC6A8-201ENST00000253122 Q8N3U1 123 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms