RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TNFRSF6BO95407 300 aa13.04□□□□□ -0.32
NEDD8-201ENST00000250495 A0A1W2PNN7 141 aa13.03□□□□□ -0.32
NEDD8-201ENST00000250495 IFI27P40305 119 aaPredicted RBP13.03□□□□□ -0.32
NEDD8-201ENST00000250495 KRTAP10-8P60410 259 aa13.03□□□□□ -0.32
NEDD8-201ENST00000250495 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
NEDD8-201ENST00000250495 PMCHL1Q16048 86 aa13.03□□□□□ -0.32
NEDD8-201ENST00000250495 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
NEDD8-201ENST00000250495 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.33
NEDD8-201ENST00000250495 RPL39P62891 51 aaKnown RBP13.02□□□□□ -0.33
NEDD8-201ENST00000250495 SMIM2Q9BVW6 85 aa13.02□□□□□ -0.33
NEDD8-201ENST00000250495 SPANXA1Q9NS26 97 aa13.02□□□□□ -0.33
NEDD8-201ENST00000250495 C20orf202A1L168 122 aa13.01□□□□□ -0.33
NEDD8-201ENST00000250495 F8WDY8 70 aa13.01□□□□□ -0.33
NEDD8-201ENST00000250495 RPL18AQ02543 176 aaKnown RBP13.01□□□□□ -0.33
NEDD8-201ENST00000250495 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
NEDD8-201ENST00000250495 PET117Q6UWS5 81 aa13□□□□□ -0.33
NEDD8-201ENST00000250495 Q8N8P6 123 aa13□□□□□ -0.33
NEDD8-201ENST00000250495 OPRPNQ99935 248 aaPredicted RBP13□□□□□ -0.33
NEDD8-201ENST00000250495 VAMP8Q9BV40 100 aa13□□□□□ -0.33
NEDD8-201ENST00000250495 LOC389332A0A1B0GUA5 103 aa12.99□□□□□ -0.33
NEDD8-201ENST00000250495 LINC00587B1AMM8 73 aa12.99□□□□□ -0.33
NEDD8-201ENST00000250495 HBDP02042 147 aa12.99□□□□□ -0.33
NEDD8-201ENST00000250495 MRPS36P82909 103 aaKnown RBP12.99□□□□□ -0.33
NEDD8-201ENST00000250495 MAP1LC3CQ9BXW4 147 aa12.99□□□□□ -0.33
NEDD8-201ENST00000250495 A0A096LNJ9 63 aa12.98□□□□□ -0.33
NEDD8-201ENST00000250495 IGHV3OR16-9A0A0B4J2B5 98 aa12.98□□□□□ -0.33
NEDD8-201ENST00000250495 SYS1-DBNDD2H3BUS1 97 aa12.98□□□□□ -0.33
NEDD8-201ENST00000250495 ORAOV1Q8WV07 137 aa12.98□□□□□ -0.33
NEDD8-201ENST00000250495 FAM104AQ969W3 186 aa12.98□□□□□ -0.33
NEDD8-201ENST00000250495 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
NEDD8-201ENST00000250495 K7EMI3 77 aa12.97□□□□□ -0.33
NEDD8-201ENST00000250495 DDTP30046 118 aa12.97□□□□□ -0.33
NEDD8-201ENST00000250495 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
NEDD8-201ENST00000250495 NDUFA1O15239 70 aa12.96□□□□□ -0.33
NEDD8-201ENST00000250495 PRO1933Q9H354 126 aa12.96□□□□□ -0.33
NEDD8-201ENST00000250495 ODF1Q14990 250 aa12.95□□□□□ -0.34
NEDD8-201ENST00000250495 LINC00173Q6ZV60 143 aa12.94□□□□□ -0.34
NEDD8-201ENST00000250495 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
NEDD8-201ENST00000250495 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
NEDD8-201ENST00000250495 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
NEDD8-201ENST00000250495 PYGO1Q9Y3Y4 419 aa12.92□□□□□ -0.34
NEDD8-201ENST00000250495 TLX1NBP0CAT3 122 aa12.91□□□□□ -0.34
NEDD8-201ENST00000250495 PAM16Q9Y3D7 125 aa12.91□□□□□ -0.34
NEDD8-201ENST00000250495 LRP2P98164 4655 aa12.9□□□□□ -0.34
NEDD8-201ENST00000250495 ORMDL2Q53FV1 153 aa12.9□□□□□ -0.34
NEDD8-201ENST00000250495 C10orf25Q5T742 122 aa12.9□□□□□ -0.34
NEDD8-201ENST00000250495 UNQ6190/PRO20217Q6UXQ8 127 aa12.9□□□□□ -0.34
NEDD8-201ENST00000250495 A0A087WZ39 114 aa12.89□□□□□ -0.35
NEDD8-201ENST00000250495 SPATA45Q537H7 98 aa12.89□□□□□ -0.35
NEDD8-201ENST00000250495 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
NEDD8-201ENST00000250495 LINC01549A6NIU2 74 aa12.88□□□□□ -0.35
NEDD8-201ENST00000250495 MIEN1Q9BRT3 115 aa12.88□□□□□ -0.35
NEDD8-201ENST00000250495 C6orf48Q9UBA6 75 aa12.88□□□□□ -0.35
NEDD8-201ENST00000250495 ATP5LO75964 103 aa12.87□□□□□ -0.35
NEDD8-201ENST00000250495 LINC00242Q5T6M2 205 aa12.87□□□□□ -0.35
NEDD8-201ENST00000250495 TMEM141Q96I45 108 aa12.87□□□□□ -0.35
NEDD8-201ENST00000250495 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 IGLV7-43P04211 117 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 G0S2P27469 103 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 DIRC1Q969H9 104 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
NEDD8-201ENST00000250495 FAM168BA1KXE4 195 aa12.85□□□□□ -0.35
NEDD8-201ENST00000250495 UQCR10Q9UDW1 63 aa12.85□□□□□ -0.35
NEDD8-201ENST00000250495 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
NEDD8-201ENST00000250495 HSBP1L1C9JCN9 74 aa12.84□□□□□ -0.35
NEDD8-201ENST00000250495 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
NEDD8-201ENST00000250495 ATOH7Q8N100 152 aa12.84□□□□□ -0.35
NEDD8-201ENST00000250495 C14orf144Q96I85 54 aa12.84□□□□□ -0.35
NEDD8-201ENST00000250495 FAM19A5Q7Z5A7 132 aaPredicted RBP12.83□□□□□ -0.36
NEDD8-201ENST00000250495 LINC01561Q8N1V8 128 aa12.83□□□□□ -0.36
NEDD8-201ENST00000250495 C2orf88Q9BSF0 95 aa12.83□□□□□ -0.36
NEDD8-201ENST00000250495 TOMM6Q96B49 74 aa12.82□□□□□ -0.36
NEDD8-201ENST00000250495 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
NEDD8-201ENST00000250495 UBE2D1P51668 147 aa12.81□□□□□ -0.36
NEDD8-201ENST00000250495 LBHQ53QV2 105 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-201ENST00000250495 Q6ZN92 141 aa12.81□□□□□ -0.36
NEDD8-201ENST00000250495 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
NEDD8-201ENST00000250495 CTAG1AP78358 180 aa12.8□□□□□ -0.36
NEDD8-201ENST00000250495 C2orf66Q6UXQ4 117 aa12.8□□□□□ -0.36
NEDD8-201ENST00000250495 VCX2Q9H322 139 aa12.8□□□□□ -0.36
NEDD8-201ENST00000250495 H0Y8G0 127 aa12.79□□□□□ -0.36
NEDD8-201ENST00000250495 C2orf82Q6UX34 121 aa12.79□□□□□ -0.36
NEDD8-201ENST00000250495 KRTAP11-1Q8IUC1 163 aa12.79□□□□□ -0.36
NEDD8-201ENST00000250495 H0Y9J4 135 aa12.78□□□□□ -0.36
NEDD8-201ENST00000250495 NPSP0C0P6 89 aa12.78□□□□□ -0.36
NEDD8-201ENST00000250495 UBE2BP63146 152 aa12.78□□□□□ -0.36
NEDD8-201ENST00000250495 AMELXQ99217 191 aa12.78□□□□□ -0.36
NEDD8-201ENST00000250495 TRAV12-1A0A0B4J245 112 aa12.77□□□□□ -0.37
NEDD8-201ENST00000250495 M0QXV9 152 aa12.77□□□□□ -0.37
NEDD8-201ENST00000250495 PRSS2P07478 247 aa12.77□□□□□ -0.37
NEDD8-201ENST00000250495 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.37
NEDD8-201ENST00000250495 PRR26Q8N8Z3 221 aa12.77□□□□□ -0.37
NEDD8-201ENST00000250495 ZC2HC1BQ5TFG8 222 aa12.76□□□□□ -0.37
NEDD8-201ENST00000250495 ERASQ7Z444 233 aa12.75□□□□□ -0.37
NEDD8-201ENST00000250495 SCGB3A1Q96QR1 104 aa12.75□□□□□ -0.37
NEDD8-201ENST00000250495 CKS1BP61024 79 aa12.74□□□□□ -0.37
NEDD8-201ENST00000250495 C6orf226Q5I0X4 101 aa12.74□□□□□ -0.37
NEDD8-201ENST00000250495 C9orf129Q5T035 196 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms