RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 DSCR9P59020 149 aa9.59□□□□□ -0.87
CCDC117-201ENST00000249064 LINC00337Q8N6G1 96 aa9.59□□□□□ -0.87
CCDC117-201ENST00000249064 CHD6Q8TD26 2715 aa9.59□□□□□ -0.87
CCDC117-201ENST00000249064 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 LITAFQ99732 161 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 Q6ZTI0 123 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 CCL18P55774 89 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 SS18Q15532 418 aa9.58□□□□□ -0.88
CCDC117-201ENST00000249064 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
CCDC117-201ENST00000249064 SMIM1B2RUZ4 78 aa9.57□□□□□ -0.88
CCDC117-201ENST00000249064 RPL28P46779 137 aaKnown RBP9.57□□□□□ -0.88
CCDC117-201ENST00000249064 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
CCDC117-201ENST00000249064 DEFB105AQ8NG35 78 aa9.57□□□□□ -0.88
CCDC117-201ENST00000249064 CELSR2Q9HCU4 2923 aa9.57□□□□□ -0.88
CCDC117-201ENST00000249064 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
CCDC117-201ENST00000249064 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
CCDC117-201ENST00000249064 C6orf99Q4VX62 202 aa9.56□□□□□ -0.88
CCDC117-201ENST00000249064 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
CCDC117-201ENST00000249064 PF4P02776 101 aa9.56□□□□□ -0.88
CCDC117-201ENST00000249064 RPS28P62857 69 aaKnown RBP9.56□□□□□ -0.88
CCDC117-201ENST00000249064 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
CCDC117-201ENST00000249064 A8MTW9 85 aa9.55□□□□□ -0.88
CCDC117-201ENST00000249064 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
CCDC117-201ENST00000249064 PRO0628Q9UI54 55 aa9.54□□□□□ -0.88
CCDC117-201ENST00000249064 LOC100131303A0A0U1RQF7 123 aa9.54□□□□□ -0.88
CCDC117-201ENST00000249064 K7EQD1 137 aa9.54□□□□□ -0.88
CCDC117-201ENST00000249064 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.54□□□□□ -0.88
CCDC117-201ENST00000249064 SMIM26A0A096LP01 95 aa9.53□□□□□ -0.88
CCDC117-201ENST00000249064 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
CCDC117-201ENST00000249064 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
CCDC117-201ENST00000249064 ITPR3Q14573 2671 aa9.52□□□□□ -0.88
CCDC117-201ENST00000249064 MAP6D1Q9H9H5 199 aa9.52□□□□□ -0.89
CCDC117-201ENST00000249064 HECTD1Q9ULT8 2610 aa9.52□□□□□ -0.89
CCDC117-201ENST00000249064 WFDC10AQ9H1F0 79 aa9.52□□□□□ -0.89
CCDC117-201ENST00000249064 FAM222AQ5U5X8 452 aa9.51□□□□□ -0.89
CCDC117-201ENST00000249064 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
CCDC117-201ENST00000249064 CCKP06307 115 aa9.51□□□□□ -0.89
CCDC117-201ENST00000249064 ZNF702PQ9H963 129 aa9.5□□□□□ -0.89
CCDC117-201ENST00000249064 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
CCDC117-201ENST00000249064 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
CCDC117-201ENST00000249064 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
CCDC117-201ENST00000249064 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
CCDC117-201ENST00000249064 FBN2P35556 2912 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 CCL24O00175 119 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 SEC61GP60059 68 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 IGHV4-31P0DP07 118 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 Q8N3U1 123 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 NF1P21359 2839 aa9.49□□□□□ -0.89
CCDC117-201ENST00000249064 Q6ZQY7 126 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 NREPQ16612 68 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC117-201ENST00000249064 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
CCDC117-201ENST00000249064 Q6YL49 198 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 Q8N9L7 120 aa9.48□□□□□ -0.89
CCDC117-201ENST00000249064 DEFB113Q30KQ7 82 aa9.47□□□□□ -0.89
CCDC117-201ENST00000249064 CELA1Q9UNI1 258 aa9.47□□□□□ -0.89
CCDC117-201ENST00000249064 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
CCDC117-201ENST00000249064 A0A087WZ39 114 aa9.47□□□□□ -0.89
CCDC117-201ENST00000249064 TRBV7-6A0A0J9YX20 115 aa9.47□□□□□ -0.89
CCDC117-201ENST00000249064 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
CCDC117-201ENST00000249064 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
CCDC117-201ENST00000249064 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
CCDC117-201ENST00000249064 C3orf84H3BNL1 204 aa9.46□□□□□ -0.9
CCDC117-201ENST00000249064 MIFP14174 115 aa9.46□□□□□ -0.9
CCDC117-201ENST00000249064 TRAV7A0A075B6U4 112 aa9.45□□□□□ -0.9
CCDC117-201ENST00000249064 PSPHP1O15172 72 aa9.45□□□□□ -0.9
CCDC117-201ENST00000249064 PLA2G2AP14555 144 aa9.45□□□□□ -0.9
CCDC117-201ENST00000249064 GYPEP15421 78 aa9.44□□□□□ -0.9
CCDC117-201ENST00000249064 ATP5EP2Q5VTU8 51 aa9.44□□□□□ -0.9
CCDC117-201ENST00000249064 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
CCDC117-201ENST00000249064 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
CCDC117-201ENST00000249064 DEFB4AO15263 64 aa9.44□□□□□ -0.9
CCDC117-201ENST00000249064 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
CCDC117-201ENST00000249064 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
CCDC117-201ENST00000249064 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
CCDC117-201ENST00000249064 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
CCDC117-201ENST00000249064 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
CCDC117-201ENST00000249064 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
CCDC117-201ENST00000249064 Q8N814 137 aa9.42□□□□□ -0.9
CCDC117-201ENST00000249064 OXTP01178 125 aa9.41□□□□□ -0.9
CCDC117-201ENST00000249064 RETNQ9HD89 108 aa9.41□□□□□ -0.9
CCDC117-201ENST00000249064 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
CCDC117-201ENST00000249064 BBC3Q96PG8 261 aaPredicted RBP9.41□□□□□ -0.9
CCDC117-201ENST00000249064 IGKV2-28A0A075B6P5 120 aa9.4□□□□□ -0.9
CCDC117-201ENST00000249064 IGKV2D-28P01615 120 aa9.4□□□□□ -0.9
CCDC117-201ENST00000249064 TRBV6-4A0A1B0GX49 114 aa9.39□□□□□ -0.91
CCDC117-201ENST00000249064 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
CCDC117-201ENST00000249064 C4orf3Q8WVX3 66 aa9.39□□□□□ -0.91
CCDC117-201ENST00000249064 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
CCDC117-201ENST00000249064 IGLV5-39A0A0G2JS06 123 aa9.39□□□□□ -0.91
CCDC117-201ENST00000249064 BPY2O14599 106 aa9.39□□□□□ -0.91
CCDC117-201ENST00000249064 Q6ZVQ6 151 aa9.38□□□□□ -0.91
CCDC117-201ENST00000249064 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
CCDC117-201ENST00000249064 AKAP9Q99996 3911 aa9.38□□□□□ -0.91
CCDC117-201ENST00000249064 KLK9Q2XQG4 91 aa9.38□□□□□ -0.91
CCDC117-201ENST00000249064 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms