RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 LINC00208Q96KT6 92 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 IBA57-AS1B1ANH7 110 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 SEC61GP60059 68 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 CRYGAP11844 174 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 UBE2D3P61077 147 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 UBE2D2P62837 147 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 J3QKU1 62 aa5.43□□□□□ -1.54
RIF1-201ENST00000243326 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 LINC00574Q9H8X3 128 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 SMR3AQ99954 134 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 CHCHD7Q9BUK0 85 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 DEFB131BA0A096LNP1 70 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 C11orf45Q8TAV5 145 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
RIF1-201ENST00000243326 AVPP01185 164 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 INAFM1C9JVW0 142 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 ODF3Q96PU9 254 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 ESRGQ1W209 222 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
RIF1-201ENST00000243326 LINC00846Q9NV44 126 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 PRYO14603 147 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
RIF1-201ENST00000243326 C11orf71Q6IPW1 123 aa5.41□□□□□ -1.54
RIF1-201ENST00000243326 TMEM89A2RUT3 159 aa5.4□□□□□ -1.54
RIF1-201ENST00000243326 ZNF292O60281 2723 aa5.4□□□□□ -1.54
RIF1-201ENST00000243326 SYCNQ0VAF6 134 aa5.4□□□□□ -1.54
RIF1-201ENST00000243326 Q8N2B8 174 aa5.4□□□□□ -1.54
RIF1-201ENST00000243326 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 SPINK1P00995 79 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 CDC42SE2Q9NRR3 84 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 Q6YL49 198 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 NTM-AS1Q6ZSK4 140 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 FSTL3O95633 263 aa5.4□□□□□ -1.55
RIF1-201ENST00000243326 Q8N6K4 173 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 TNFRSF13BO14836 293 aaPredicted RBP5.39□□□□□ -1.55
RIF1-201ENST00000243326 Q8N814 137 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 PLAC8L1A1L4L8 177 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 CYSRT1A8MQ03 144 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 PDE6GP18545 87 aa5.39□□□□□ -1.55
RIF1-201ENST00000243326 ZNF73O43830 326 aaPredicted RBP5.38□□□□□ -1.55
RIF1-201ENST00000243326 PYGO1Q9Y3Y4 419 aa5.38□□□□□ -1.55
RIF1-201ENST00000243326 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.38□□□□□ -1.55
RIF1-201ENST00000243326 FAM218AQ96MZ4 157 aa5.38□□□□□ -1.55
RIF1-201ENST00000243326 TEP1Q99973 2627 aaKnown RBP5.38□□□□□ -1.55
RIF1-201ENST00000243326 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
RIF1-201ENST00000243326 KLLNB2CW77 178 aa5.38□□□□□ -1.55
RIF1-201ENST00000243326 BRI3O95415 125 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 Q8N3U1 123 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 SETXQ7Z333 2677 aaKnown RBP5.37□□□□□ -1.55
RIF1-201ENST00000243326 M0R378 163 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 KRTAP10-9P60411 292 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 PSMG3-AS1Q96PY0 264 aa5.37□□□□□ -1.55
RIF1-201ENST00000243326 KPRPQ5T749 579 aaPredicted RBP5.36□□□□□ -1.55
RIF1-201ENST00000243326 SBSPONQ8IVN8 264 aa5.36□□□□□ -1.55
RIF1-201ENST00000243326 TRBV7-7A0A0K0K1E9 115 aa5.36□□□□□ -1.55
RIF1-201ENST00000243326 X6R8D5 127 aa5.36□□□□□ -1.55
RIF1-201ENST00000243326 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
RIF1-201ENST00000243326 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
RIF1-201ENST00000243326 TRBV6-4A0A1B0GX49 114 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
RIF1-201ENST00000243326 CENPFP49454 3210 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 IMUPQ9GZP8 106 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 OXLD1Q5BKU9 147 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 CD164L2Q6UWJ8 174 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 PRORYQ9H606 182 aa5.35□□□□□ -1.55
RIF1-201ENST00000243326 MRGPRG-AS1Q2M3A8 158 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 LINC01006Q8NI28 216 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 TEX15Q9BXT5 2789 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 H3BQ85 93 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 PRO0461Q9UI25 63 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 A0A0C4DFX4 3053 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
RIF1-201ENST00000243326 ODF3L2Q3SX64 289 aa5.34□□□□□ -1.56
RIF1-201ENST00000243326 CIRBP-AS1Q8TBR5 109 aa5.34□□□□□ -1.56
RIF1-201ENST00000243326 DNAH12Q6ZR08 3092 aa5.34□□□□□ -1.56
RIF1-201ENST00000243326 IGLV1-40P01703 118 aa5.33□□□□□ -1.56
RIF1-201ENST00000243326 Q6ZVQ6 151 aa5.33□□□□□ -1.56
RIF1-201ENST00000243326 FHL3Q13643 280 aa5.33□□□□□ -1.56
RIF1-201ENST00000243326 SMIM29Q86T20 159 aa5.33□□□□□ -1.56
RIF1-201ENST00000243326 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
RIF1-201ENST00000243326 SMCR5Q8TEV8 140 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 LY6G6DO95868 133 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 A0A1W2PPR1 153 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 A0A087WSZ3 146 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 CNFNQ9BYD5 112 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 H0Y9P7 68 aa5.32□□□□□ -1.56
RIF1-201ENST00000243326 PRLHP81277 87 aa5.31□□□□□ -1.56
RIF1-201ENST00000243326 FSHBP01225 129 aa5.31□□□□□ -1.56
RIF1-201ENST00000243326 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
RIF1-201ENST00000243326 AMELXQ99217 191 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms