RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 ACYP1P07311 99 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 BAALC-AS2P0C853 105 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 FHL2Q14192 279 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
CTSD-201ENST00000236671 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
CTSD-201ENST00000236671 B5MCH6 92 aa10.87□□□□□ -0.67
CTSD-201ENST00000236671 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
CTSD-201ENST00000236671 C16orf95Q9H693 158 aa10.86□□□□□ -0.67
CTSD-201ENST00000236671 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
CTSD-201ENST00000236671 CHCHD5Q9BSY4 110 aa10.85□□□□□ -0.67
CTSD-201ENST00000236671 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
CTSD-201ENST00000236671 NBEAL1Q6ZS30 2694 aa10.84□□□□□ -0.67
CTSD-201ENST00000236671 A0A087WZ39 114 aa10.84□□□□□ -0.67
CTSD-201ENST00000236671 LINC00158P58513 81 aa10.84□□□□□ -0.67
CTSD-201ENST00000236671 CCL18P55774 89 aa10.84□□□□□ -0.67
CTSD-201ENST00000236671 Q9HAA7 133 aa10.84□□□□□ -0.67
CTSD-201ENST00000236671 IBA57-AS1B1ANH7 110 aa10.83□□□□□ -0.68
CTSD-201ENST00000236671 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
CTSD-201ENST00000236671 NOTCH1P46531 2555 aa10.83□□□□□ -0.68
CTSD-201ENST00000236671 SDIM1Q6ZPB5 146 aa10.82□□□□□ -0.68
CTSD-201ENST00000236671 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
CTSD-201ENST00000236671 MALP21145 153 aa10.82□□□□□ -0.68
CTSD-201ENST00000236671 C5orf38Q86SI9 138 aa10.82□□□□□ -0.68
CTSD-201ENST00000236671 A0A087WYN8 130 aa10.81□□□□□ -0.68
CTSD-201ENST00000236671 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
CTSD-201ENST00000236671 LINC00959A0A1B0GUT2 108 aa10.8□□□□□ -0.68
CTSD-201ENST00000236671 LINC00643Q86TS7 51 aa10.8□□□□□ -0.68
CTSD-201ENST00000236671 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
CTSD-201ENST00000236671 INAFM2P0DMQ5 153 aa10.79□□□□□ -0.68
CTSD-201ENST00000236671 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
CTSD-201ENST00000236671 PFN2P35080 140 aa10.79□□□□□ -0.68
CTSD-201ENST00000236671 DEFB130BP0DP73 79 aa10.78□□□□□ -0.68
CTSD-201ENST00000236671 DEFB130AP0DP74 79 aa10.78□□□□□ -0.68
CTSD-201ENST00000236671 LINC00612Q8N6U2 182 aa10.78□□□□□ -0.68
CTSD-201ENST00000236671 KIR2DL5BQ8NHK3 375 aa10.77□□□□□ -0.69
CTSD-201ENST00000236671 FAM236AA0A1B0GUQ0 79 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 FAM236BA0A1B0GV22 79 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 H0YGX0 51 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 DNAL4O96015 105 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 GYPEP15421 78 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 GAGE2AQ6NT46 116 aa10.76□□□□□ -0.69
CTSD-201ENST00000236671 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
CTSD-201ENST00000236671 PAX4O43316 350 aa10.75□□□□□ -0.69
CTSD-201ENST00000236671 C9orf129Q5T035 196 aaKnown RBP10.75□□□□□ -0.69
CTSD-201ENST00000236671 XCL1P47992 114 aa10.75□□□□□ -0.69
CTSD-201ENST00000236671 C6orf226Q5I0X4 101 aa10.75□□□□□ -0.69
CTSD-201ENST00000236671 A0A1B0GUV1 79 aa10.73□□□□□ -0.69
CTSD-201ENST00000236671 ATP5G1P05496 136 aa10.73□□□□□ -0.69
CTSD-201ENST00000236671 LECT2O14960 151 aa10.73□□□□□ -0.69
CTSD-201ENST00000236671 Q8IZM0 81 aa10.73□□□□□ -0.69
CTSD-201ENST00000236671 OBSCN-AS1Q96MR7 158 aa10.73□□□□□ -0.69
CTSD-201ENST00000236671 SS18Q15532 418 aa10.72□□□□□ -0.69
CTSD-201ENST00000236671 CLPSL2Q6UWE3 100 aa10.72□□□□□ -0.69
CTSD-201ENST00000236671 OR13C6PQ8NH95 151 aa10.72□□□□□ -0.69
CTSD-201ENST00000236671 X6R8D5 127 aa10.72□□□□□ -0.69
CTSD-201ENST00000236671 CXCL5P42830 114 aa10.71□□□□□ -0.69
CTSD-201ENST00000236671 C14orf132Q9NPU4 83 aa10.71□□□□□ -0.69
CTSD-201ENST00000236671 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
CTSD-201ENST00000236671 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
CTSD-201ENST00000236671 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
CTSD-201ENST00000236671 A0A096LPF7 62 aa10.69□□□□□ -0.7
CTSD-201ENST00000236671 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
CTSD-201ENST00000236671 KLK5Q9Y337 293 aaPredicted RBP10.68□□□□□ -0.7
CTSD-201ENST00000236671 SLPIP03973 132 aa10.67□□□□□ -0.7
CTSD-201ENST00000236671 SMIM9A6NGZ8 99 aa10.66□□□□□ -0.7
CTSD-201ENST00000236671 NANOS2P60321 138 aaKnown RBP10.66□□□□□ -0.7
CTSD-201ENST00000236671 KIAA0087Q14695 138 aa10.66□□□□□ -0.7
CTSD-201ENST00000236671 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
CTSD-201ENST00000236671 NBEAL2Q6ZNJ1 2754 aa10.66□□□□□ -0.7
CTSD-201ENST00000236671 NCR3O14931 201 aa10.66□□□□□ -0.7
CTSD-201ENST00000236671 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
CTSD-201ENST00000236671 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
CTSD-201ENST00000236671 LINC00269Q8N2A0 174 aa10.64□□□□□ -0.71
CTSD-201ENST00000236671 ORMDL1Q9P0S3 153 aa10.64□□□□□ -0.71
CTSD-201ENST00000236671 HIST1H4AP62805 103 aaKnown RBP10.64□□□□□ -0.71
CTSD-201ENST00000236671 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
CTSD-201ENST00000236671 CD164L2Q6UWJ8 174 aa10.64□□□□□ -0.71
CTSD-201ENST00000236671 LINC00846Q9NV44 126 aa10.64□□□□□ -0.71
CTSD-201ENST00000236671 Q8N3U1 123 aa10.63□□□□□ -0.71
CTSD-201ENST00000236671 LYRM9A8MSI8 78 aa10.63□□□□□ -0.71
CTSD-201ENST00000236671 NDUFC2O95298 119 aa10.63□□□□□ -0.71
CTSD-201ENST00000236671 CHCHD10Q8WYQ3 142 aaPredicted RBP10.63□□□□□ -0.71
CTSD-201ENST00000236671 COX17Q14061 63 aa10.62□□□□□ -0.71
CTSD-201ENST00000236671 C3orf22Q8N5N4 141 aa10.62□□□□□ -0.71
CTSD-201ENST00000236671 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
CTSD-201ENST00000236671 SVIPQ8NHG7 77 aa10.61□□□□□ -0.71
CTSD-201ENST00000236671 Q6JHZ5 121 aa10.61□□□□□ -0.71
CTSD-201ENST00000236671 IGLV10-54A0A075B6I4 117 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 IGHV4-28A0A0C4DH34 117 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 A0A1B0GX51 115 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 UQCRQO14949 82 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 REG3AQ06141 175 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 DEFB4AO15263 64 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 Q8N814 137 aa10.6□□□□□ -0.71
CTSD-201ENST00000236671 ANGP03950 147 aaKnown RBP10.59□□□□□ -0.71
CTSD-201ENST00000236671 C9orf116Q5BN46 136 aaPredicted RBP10.59□□□□□ -0.71
CTSD-201ENST00000236671 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms