RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 CELA1Q9UNI1 258 aa11.65□□□□□ -0.54
GAPDH-201ENST00000229239 EGFEM1PQ0D2K5 195 aa11.64□□□□□ -0.55
GAPDH-201ENST00000229239 TRAV13-2A0A0B4J235 113 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 C9JAW5 83 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 KRTAP10-11P60412 298 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 Q8IZM0 81 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 PCP4P48539 62 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
GAPDH-201ENST00000229239 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
GAPDH-201ENST00000229239 ANKRD29Q8N6D5 301 aa11.62□□□□□ -0.55
GAPDH-201ENST00000229239 A0A096LPF7 62 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 LELP1Q5T871 98 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 CD164L2Q6UWJ8 174 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 CXCL5P42830 114 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 C6orf226Q5I0X4 101 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 SPATA25Q9BR10 227 aa11.61□□□□□ -0.55
GAPDH-201ENST00000229239 H3BT86 120 aa11.6□□□□□ -0.55
GAPDH-201ENST00000229239 LST1O00453 97 aa11.6□□□□□ -0.55
GAPDH-201ENST00000229239 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
GAPDH-201ENST00000229239 H3BNG1 76 aa11.59□□□□□ -0.55
GAPDH-201ENST00000229239 XCL1P47992 114 aa11.59□□□□□ -0.55
GAPDH-201ENST00000229239 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
GAPDH-201ENST00000229239 LINC00158P58513 81 aa11.59□□□□□ -0.55
GAPDH-201ENST00000229239 K7EIL1 84 aa11.58□□□□□ -0.56
GAPDH-201ENST00000229239 COX7A2LO14548 114 aa11.58□□□□□ -0.56
GAPDH-201ENST00000229239 LINC00269Q8N2A0 174 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 CRPP02741 224 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 REG3AQ06141 175 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 SND1-IT1Q9HBX3 110 aa11.57□□□□□ -0.56
GAPDH-201ENST00000229239 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
GAPDH-201ENST00000229239 COX17Q14061 63 aa11.55□□□□□ -0.56
GAPDH-201ENST00000229239 HTN3P15516 51 aa11.55□□□□□ -0.56
GAPDH-201ENST00000229239 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
GAPDH-201ENST00000229239 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
GAPDH-201ENST00000229239 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
GAPDH-201ENST00000229239 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
GAPDH-201ENST00000229239 RPL28P46779 137 aaKnown RBP11.54□□□□□ -0.56
GAPDH-201ENST00000229239 CKS1BP61024 79 aa11.54□□□□□ -0.56
GAPDH-201ENST00000229239 C2orf82Q6UX34 121 aa11.54□□□□□ -0.56
GAPDH-201ENST00000229239 SCGB1A1P11684 91 aa11.53□□□□□ -0.56
GAPDH-201ENST00000229239 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
GAPDH-201ENST00000229239 CLPSL2Q6UWE3 100 aa11.53□□□□□ -0.56
GAPDH-201ENST00000229239 TRACP01848 142 aa11.53□□□□□ -0.56
GAPDH-201ENST00000229239 MALP21145 153 aa11.53□□□□□ -0.56
GAPDH-201ENST00000229239 COL7A1Q02388 2944 aa11.52□□□□□ -0.57
GAPDH-201ENST00000229239 CCL18P55774 89 aa11.52□□□□□ -0.57
GAPDH-201ENST00000229239 CLEC2BQ92478 149 aa11.51□□□□□ -0.57
GAPDH-201ENST00000229239 PRR34Q9NV39 138 aa11.51□□□□□ -0.57
GAPDH-201ENST00000229239 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
GAPDH-201ENST00000229239 PFN2P35080 140 aa11.5□□□□□ -0.57
GAPDH-201ENST00000229239 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
GAPDH-201ENST00000229239 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
GAPDH-201ENST00000229239 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 LYPD5Q6UWN5 251 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 DNAH9Q9NYC9 4486 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 IGKV2-28A0A075B6P5 120 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 H0YGX0 51 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 IGKV2D-28P01615 120 aa11.49□□□□□ -0.57
GAPDH-201ENST00000229239 NDUFC2O95298 119 aa11.47□□□□□ -0.57
GAPDH-201ENST00000229239 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
GAPDH-201ENST00000229239 B9D2Q9BPU9 175 aa11.46□□□□□ -0.57
GAPDH-201ENST00000229239 Q8N3U1 123 aa11.46□□□□□ -0.58
GAPDH-201ENST00000229239 RETNQ9HD89 108 aa11.46□□□□□ -0.58
GAPDH-201ENST00000229239 IGLV10-54A0A075B6I4 117 aa11.45□□□□□ -0.58
GAPDH-201ENST00000229239 CDIP1Q9H305 208 aa11.44□□□□□ -0.58
GAPDH-201ENST00000229239 KLK12Q9UKR0 248 aa11.43□□□□□ -0.58
GAPDH-201ENST00000229239 TEX49A0A1B0GTD5 131 aa11.42□□□□□ -0.58
GAPDH-201ENST00000229239 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
GAPDH-201ENST00000229239 Q6ZTC4 211 aa11.42□□□□□ -0.58
GAPDH-201ENST00000229239 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
GAPDH-201ENST00000229239 A0A0J9YWU9 116 aa11.41□□□□□ -0.58
GAPDH-201ENST00000229239 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
GAPDH-201ENST00000229239 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
GAPDH-201ENST00000229239 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.58
GAPDH-201ENST00000229239 NHLRC4P0CG21 123 aaPredicted RBP11.39□□□□□ -0.59
GAPDH-201ENST00000229239 OR13C6PQ8NH95 151 aa11.39□□□□□ -0.59
GAPDH-201ENST00000229239 DNAL4O96015 105 aa11.38□□□□□ -0.59
GAPDH-201ENST00000229239 C11orf45Q8TAV5 145 aa11.38□□□□□ -0.59
GAPDH-201ENST00000229239 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
GAPDH-201ENST00000229239 A0A1B0GX51 115 aa11.38□□□□□ -0.59
GAPDH-201ENST00000229239 BAALC-AS2P0C853 105 aa11.38□□□□□ -0.59
GAPDH-201ENST00000229239 ACYP1P07311 99 aa11.37□□□□□ -0.59
GAPDH-201ENST00000229239 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
GAPDH-201ENST00000229239 FAM218AQ96MZ4 157 aa11.36□□□□□ -0.59
GAPDH-201ENST00000229239 DEFB131BA0A096LNP1 70 aa11.36□□□□□ -0.59
GAPDH-201ENST00000229239 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
GAPDH-201ENST00000229239 F8WDY8 70 aa11.35□□□□□ -0.59
GAPDH-201ENST00000229239 INAFM2P0DMQ5 153 aa11.34□□□□□ -0.59
GAPDH-201ENST00000229239 SNCGO76070 127 aa11.34□□□□□ -0.59
GAPDH-201ENST00000229239 LINC01556Q5JQF7 62 aa11.34□□□□□ -0.59
GAPDH-201ENST00000229239 XGP55808 180 aa11.33□□□□□ -0.6
GAPDH-201ENST00000229239 NANOS2P60321 138 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms