RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ANK2Q01484 3957 aa17.39■□□□□ 0.37
RUNDC3A-201ENST00000225441 TRAV26-1A0A087WT03 109 aa17.39■□□□□ 0.37
RUNDC3A-201ENST00000225441 LINC01561Q8N1V8 128 aa17.39■□□□□ 0.37
RUNDC3A-201ENST00000225441 CRPP02741 224 aa17.37■□□□□ 0.37
RUNDC3A-201ENST00000225441 C15orf53Q8NAA6 179 aa17.37■□□□□ 0.37
RUNDC3A-201ENST00000225441 IGLV4-60A0A075B6I1 120 aa17.36■□□□□ 0.37
RUNDC3A-201ENST00000225441 A0A1B0GUV1 79 aa17.36■□□□□ 0.37
RUNDC3A-201ENST00000225441 MIR7-3HGQ8N6C7 128 aa17.35■□□□□ 0.37
RUNDC3A-201ENST00000225441 PKD1L1Q8TDX9 2849 aa17.35■□□□□ 0.37
RUNDC3A-201ENST00000225441 ANAPC13Q9BS18 74 aa17.35■□□□□ 0.37
RUNDC3A-201ENST00000225441 SND1-IT1Q9HBX3 110 aa17.34■□□□□ 0.37
RUNDC3A-201ENST00000225441 LINC00959A0A1B0GUT2 108 aa17.32■□□□□ 0.36
RUNDC3A-201ENST00000225441 IGHV4-30-4P0DP06 118 aa17.31■□□□□ 0.36
RUNDC3A-201ENST00000225441 LINC00158P58513 81 aa17.31■□□□□ 0.36
RUNDC3A-201ENST00000225441 TOMM7Q9P0U1 55 aa17.31■□□□□ 0.36
RUNDC3A-201ENST00000225441 H0YGX0 51 aa17.31■□□□□ 0.36
RUNDC3A-201ENST00000225441 BAALC-AS2P0C853 105 aa17.31■□□□□ 0.36
RUNDC3A-201ENST00000225441 SS18Q15532 418 aa17.3■□□□□ 0.36
RUNDC3A-201ENST00000225441 CMYA5Q8N3K9 4069 aa17.3■□□□□ 0.36
RUNDC3A-201ENST00000225441 APOC4P55056 127 aa17.29■□□□□ 0.36
RUNDC3A-201ENST00000225441 TTC32Q5I0X7 151 aa17.29■□□□□ 0.36
RUNDC3A-201ENST00000225441 PRO0255Q9UI72 69 aa17.29■□□□□ 0.36
RUNDC3A-201ENST00000225441 NDUFV3P56181 108 aaKnown RBP17.28■□□□□ 0.36
RUNDC3A-201ENST00000225441 IGKV2-28A0A075B6P5 120 aa17.28■□□□□ 0.36
RUNDC3A-201ENST00000225441 IGKV2D-28P01615 120 aa17.28■□□□□ 0.36
RUNDC3A-201ENST00000225441 LYRM9A8MSI8 78 aa17.27■□□□□ 0.36
RUNDC3A-201ENST00000225441 INAFM2P0DMQ5 153 aa17.27■□□□□ 0.36
RUNDC3A-201ENST00000225441 GYPEP15421 78 aa17.27■□□□□ 0.36
RUNDC3A-201ENST00000225441 CCL18P55774 89 aa17.27■□□□□ 0.36
RUNDC3A-201ENST00000225441 LINC00337Q8N6G1 96 aa17.27■□□□□ 0.36
RUNDC3A-201ENST00000225441 DEFB130BP0DP73 79 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 DEFB130AP0DP74 79 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 IGKV3OR2-268A0A0C4DH90 116 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 TRBV7-7A0A0K0K1E9 115 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 Q8IZM0 81 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 IMUPQ9GZP8 106 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 X6R8D5 127 aa17.26■□□□□ 0.35
RUNDC3A-201ENST00000225441 C6orf226Q5I0X4 101 aa17.23■□□□□ 0.35
RUNDC3A-201ENST00000225441 C5orf38Q86SI9 138 aa17.23■□□□□ 0.35
RUNDC3A-201ENST00000225441 FAM218AQ96MZ4 157 aa17.23■□□□□ 0.35
RUNDC3A-201ENST00000225441 SMIM11BQ8TCY0 68 aa17.21■□□□□ 0.35
RUNDC3A-201ENST00000225441 NHLRC4P0CG21 123 aaPredicted RBP17.2■□□□□ 0.34
RUNDC3A-201ENST00000225441 MALP21145 153 aa17.2■□□□□ 0.34
RUNDC3A-201ENST00000225441 KRTAP21-3Q3LHN1 58 aa17.2■□□□□ 0.34
RUNDC3A-201ENST00000225441 SDIM1Q6ZPB5 146 aa17.2■□□□□ 0.34
RUNDC3A-201ENST00000225441 DEFB135Q30KP9 77 aa17.19■□□□□ 0.34
RUNDC3A-201ENST00000225441 DNAL4O96015 105 aa17.19■□□□□ 0.34
RUNDC3A-201ENST00000225441 CXCL5P42830 114 aa17.19■□□□□ 0.34
RUNDC3A-201ENST00000225441 KPRPQ5T749 579 aaPredicted RBP17.19■□□□□ 0.34
RUNDC3A-201ENST00000225441 LINC00643Q86TS7 51 aa17.19■□□□□ 0.34
RUNDC3A-201ENST00000225441 C22orf24Q9Y442 160 aa17.18■□□□□ 0.34
RUNDC3A-201ENST00000225441 PAX4O43316 350 aa17.17■□□□□ 0.34
RUNDC3A-201ENST00000225441 COX17Q14061 63 aa17.17■□□□□ 0.34
RUNDC3A-201ENST00000225441 PFN2P35080 140 aa17.14■□□□□ 0.34
RUNDC3A-201ENST00000225441 CD164L2Q6UWJ8 174 aa17.14■□□□□ 0.34
RUNDC3A-201ENST00000225441 XCL1P47992 114 aa17.14■□□□□ 0.33
RUNDC3A-201ENST00000225441 DNAH3Q8TD57 4116 aa17.13■□□□□ 0.33
RUNDC3A-201ENST00000225441 A0A1B0GX51 115 aa17.12■□□□□ 0.33
RUNDC3A-201ENST00000225441 NDUFC2O95298 119 aa17.12■□□□□ 0.33
RUNDC3A-201ENST00000225441 PRB2P02812 416 aaPredicted RBP17.12■□□□□ 0.33
RUNDC3A-201ENST00000225441 MUC7Q8TAX7 377 aa17.11■□□□□ 0.33
RUNDC3A-201ENST00000225441 OBSCN-AS1Q96MR7 158 aa17.11■□□□□ 0.33
RUNDC3A-201ENST00000225441 DNHD1Q96M86 4753 aa17.1■□□□□ 0.33
RUNDC3A-201ENST00000225441 IGHV4-28A0A0C4DH34 117 aa17.1■□□□□ 0.33
RUNDC3A-201ENST00000225441 NOTCH1P46531 2555 aa17.09■□□□□ 0.33
RUNDC3A-201ENST00000225441 K7EIL1 84 aa17.09■□□□□ 0.33
RUNDC3A-201ENST00000225441 Q9HAA7 133 aa17.09■□□□□ 0.33
RUNDC3A-201ENST00000225441 MGAM2Q2M2H8 2515 aa17.09■□□□□ 0.33
RUNDC3A-201ENST00000225441 A0A087WYN8 130 aa17.07■□□□□ 0.32
RUNDC3A-201ENST00000225441 NBEAL1Q6ZS30 2694 aa17.07■□□□□ 0.32
RUNDC3A-201ENST00000225441 CFAP161Q6P656 301 aa17.07■□□□□ 0.32
RUNDC3A-201ENST00000225441 OR13C6PQ8NH95 151 aa17.07■□□□□ 0.32
RUNDC3A-201ENST00000225441 MIFP14174 115 aa17.06■□□□□ 0.32
RUNDC3A-201ENST00000225441 KIAA0087Q14695 138 aa17.06■□□□□ 0.32
RUNDC3A-201ENST00000225441 ATP5G1P05496 136 aa17.04■□□□□ 0.32
RUNDC3A-201ENST00000225441 DAD1P61803 113 aa17.04■□□□□ 0.32
RUNDC3A-201ENST00000225441 Q8NAQ8 132 aa17.04■□□□□ 0.32
RUNDC3A-201ENST00000225441 LINC00167Q96N53 147 aa17.04■□□□□ 0.32
RUNDC3A-201ENST00000225441 LINC00269Q8N2A0 174 aa17.03■□□□□ 0.32
RUNDC3A-201ENST00000225441 CHCHD10Q8WYQ3 142 aaPredicted RBP17.03■□□□□ 0.32
RUNDC3A-201ENST00000225441 NBEAL2Q6ZNJ1 2754 aa17.03■□□□□ 0.32
RUNDC3A-201ENST00000225441 RETNQ9HD89 108 aa17.03■□□□□ 0.32
RUNDC3A-201ENST00000225441 REG3AQ06141 175 aa17.02■□□□□ 0.31
RUNDC3A-201ENST00000225441 SMCR5Q8TEV8 140 aa17.02■□□□□ 0.31
RUNDC3A-201ENST00000225441 LECT2O14960 151 aa17.01■□□□□ 0.31
RUNDC3A-201ENST00000225441 GAGE2AQ6NT46 116 aa17■□□□□ 0.31
RUNDC3A-201ENST00000225441 TMEM126AQ9H061 195 aa17■□□□□ 0.31
RUNDC3A-201ENST00000225441 ORMDL1Q9P0S3 153 aa17■□□□□ 0.31
RUNDC3A-201ENST00000225441 DEFB4AO15263 64 aa17■□□□□ 0.31
RUNDC3A-201ENST00000225441 C11orf68Q9H3H3 251 aaKnown RBP17■□□□□ 0.31
RUNDC3A-201ENST00000225441 KLK5Q9Y337 293 aaPredicted RBP17■□□□□ 0.31
RUNDC3A-201ENST00000225441 ANGP03950 147 aaKnown RBP16.98■□□□□ 0.31
RUNDC3A-201ENST00000225441 CLPSL2Q6UWE3 100 aa16.98■□□□□ 0.31
RUNDC3A-201ENST00000225441 A0A096LPF7 62 aa16.97■□□□□ 0.31
RUNDC3A-201ENST00000225441 SPART-AS1P0CW21 52 aa16.97■□□□□ 0.31
RUNDC3A-201ENST00000225441 LELP1Q5T871 98 aa16.97■□□□□ 0.31
RUNDC3A-201ENST00000225441 B5MCH6 92 aa16.95■□□□□ 0.3
RUNDC3A-201ENST00000225441 CCDC179H3BU77 68 aa16.94■□□□□ 0.3
RUNDC3A-201ENST00000225441 NANOS2P60321 138 aaKnown RBP16.93■□□□□ 0.3
RUNDC3A-201ENST00000225441 JMJD7-PLA2G4BH0Y9G9 81 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms