RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
TGFBR3-201ENST00000212355 PRR15LQ9BU68 103 aa9.72□□□□□ -0.85
TGFBR3-201ENST00000212355 ACACBO00763 2458 aa9.71□□□□□ -0.85
TGFBR3-201ENST00000212355 IL17DQ8TAD2 202 aa9.71□□□□□ -0.85
TGFBR3-201ENST00000212355 BEAN1Q3B7T3 259 aa9.71□□□□□ -0.85
TGFBR3-201ENST00000212355 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.85
TGFBR3-201ENST00000212355 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
TGFBR3-201ENST00000212355 FSTL3O95633 263 aa9.7□□□□□ -0.86
TGFBR3-201ENST00000212355 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
TGFBR3-201ENST00000212355 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
TGFBR3-201ENST00000212355 LINC01556Q5JQF7 62 aa9.69□□□□□ -0.86
TGFBR3-201ENST00000212355 SBSPONQ8IVN8 264 aa9.69□□□□□ -0.86
TGFBR3-201ENST00000212355 COX17Q14061 63 aa9.69□□□□□ -0.86
TGFBR3-201ENST00000212355 LINC00575Q6W349 94 aa9.69□□□□□ -0.86
TGFBR3-201ENST00000212355 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
TGFBR3-201ENST00000212355 Q6ZVQ6 151 aa9.68□□□□□ -0.86
TGFBR3-201ENST00000212355 V9GYY9 64 aa9.68□□□□□ -0.86
TGFBR3-201ENST00000212355 PRLHP81277 87 aa9.67□□□□□ -0.86
TGFBR3-201ENST00000212355 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
TGFBR3-201ENST00000212355 Q6JHZ5 121 aa9.67□□□□□ -0.86
TGFBR3-201ENST00000212355 PCNTO95613 3336 aa9.67□□□□□ -0.86
TGFBR3-201ENST00000212355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
TGFBR3-201ENST00000212355 CCDC168Q8NDH2 2452 aa9.65□□□□□ -0.86
TGFBR3-201ENST00000212355 PTPRBP23467 1997 aa9.65□□□□□ -0.86
TGFBR3-201ENST00000212355 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.87
TGFBR3-201ENST00000212355 MUC4Q99102 2169 aa9.65□□□□□ -0.87
TGFBR3-201ENST00000212355 Q9BRP9 147 aa9.64□□□□□ -0.87
TGFBR3-201ENST00000212355 Q8N3U1 123 aa9.64□□□□□ -0.87
TGFBR3-201ENST00000212355 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
TGFBR3-201ENST00000212355 K7ERS5 55 aa9.64□□□□□ -0.87
TGFBR3-201ENST00000212355 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
TGFBR3-201ENST00000212355 A0A087WSZ3 146 aa9.63□□□□□ -0.87
TGFBR3-201ENST00000212355 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
TGFBR3-201ENST00000212355 Q6ZRU5 148 aa9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 IGLV1-51P01701 117 aa9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 RPL28P46779 137 aaKnown RBP9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
TGFBR3-201ENST00000212355 CRYGAP11844 174 aa9.61□□□□□ -0.87
TGFBR3-201ENST00000212355 AMELXQ99217 191 aa9.61□□□□□ -0.87
TGFBR3-201ENST00000212355 PRYO14603 147 aa9.61□□□□□ -0.87
TGFBR3-201ENST00000212355 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
TGFBR3-201ENST00000212355 IGF2RP11717 2491 aa9.6□□□□□ -0.87
TGFBR3-201ENST00000212355 NDUFC1O43677 76 aa9.6□□□□□ -0.87
TGFBR3-201ENST00000212355 LYPD5Q6UWN5 251 aa9.59□□□□□ -0.87
TGFBR3-201ENST00000212355 CACNA1AO00555 2505 aa9.59□□□□□ -0.87
TGFBR3-201ENST00000212355 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
TGFBR3-201ENST00000212355 PMAIP1Q13794 54 aa9.58□□□□□ -0.88
TGFBR3-201ENST00000212355 NCOR2Q9Y618 2525 aa9.58□□□□□ -0.88
TGFBR3-201ENST00000212355 DOPEY1Q5JWR5 2465 aa9.57□□□□□ -0.88
TGFBR3-201ENST00000212355 H0Y9P7 68 aa9.57□□□□□ -0.88
TGFBR3-201ENST00000212355 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
TGFBR3-201ENST00000212355 NUPR2A6NF83 97 aa9.57□□□□□ -0.88
TGFBR3-201ENST00000212355 MYO18BQ8IUG5 2567 aa9.56□□□□□ -0.88
TGFBR3-201ENST00000212355 Q8N2B8 174 aa9.56□□□□□ -0.88
TGFBR3-201ENST00000212355 ATP5EP56381 51 aaPredicted RBP9.55□□□□□ -0.88
TGFBR3-201ENST00000212355 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
TGFBR3-201ENST00000212355 HCG22E2RYF7 251 aa9.54□□□□□ -0.88
TGFBR3-201ENST00000212355 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
TGFBR3-201ENST00000212355 SMIM29Q86T20 159 aa9.53□□□□□ -0.88
TGFBR3-201ENST00000212355 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
TGFBR3-201ENST00000212355 KIAA0087Q14695 138 aa9.52□□□□□ -0.89
TGFBR3-201ENST00000212355 CDIP1Q9H305 208 aa9.52□□□□□ -0.89
TGFBR3-201ENST00000212355 SMIM26A0A096LP01 95 aa9.52□□□□□ -0.89
TGFBR3-201ENST00000212355 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
TGFBR3-201ENST00000212355 FAM218AQ96MZ4 157 aa9.51□□□□□ -0.89
TGFBR3-201ENST00000212355 C5orf42Q9H799 3197 aa9.51□□□□□ -0.89
TGFBR3-201ENST00000212355 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
TGFBR3-201ENST00000212355 C22orf24Q9Y442 160 aa9.5□□□□□ -0.89
TGFBR3-201ENST00000212355 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
TGFBR3-201ENST00000212355 IGKV2-30P06310 120 aa9.49□□□□□ -0.89
TGFBR3-201ENST00000212355 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
TGFBR3-201ENST00000212355 MUC7Q8TAX7 377 aa9.48□□□□□ -0.89
TGFBR3-201ENST00000212355 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
TGFBR3-201ENST00000212355 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
TGFBR3-201ENST00000212355 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
TGFBR3-201ENST00000212355 CEP350Q5VT06 3117 aa9.46□□□□□ -0.89
TGFBR3-201ENST00000212355 C10orf142B7Z368 130 aa9.46□□□□□ -0.89
TGFBR3-201ENST00000212355 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
TGFBR3-201ENST00000212355 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
TGFBR3-201ENST00000212355 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
TGFBR3-201ENST00000212355 C4orf26Q17RF5 130 aa9.45□□□□□ -0.9
TGFBR3-201ENST00000212355 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
TGFBR3-201ENST00000212355 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
TGFBR3-201ENST00000212355 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
TGFBR3-201ENST00000212355 IGLV8-61A0A075B6I0 122 aa9.44□□□□□ -0.9
TGFBR3-201ENST00000212355 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
TGFBR3-201ENST00000212355 C16orf95Q9H693 158 aa9.43□□□□□ -0.9
TGFBR3-201ENST00000212355 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
TGFBR3-201ENST00000212355 C1orf64Q8NEQ6 169 aa9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 MOBPQ13875 183 aa9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 FHL3Q13643 280 aa9.42□□□□□ -0.9
TGFBR3-201ENST00000212355 ST20-AS1Q8NBB2 130 aa9.41□□□□□ -0.9
TGFBR3-201ENST00000212355 FSHBP01225 129 aa9.41□□□□□ -0.9
TGFBR3-201ENST00000212355 LINC00315P59091 139 aa9.4□□□□□ -0.9
TGFBR3-201ENST00000212355 C7orf65Q6ZTY9 151 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms