RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 C6orf226Q5I0X4 101 aa12.6□□□□□ -0.39
IFRD1-201ENST00000005558 C10orf25Q5T742 122 aa12.6□□□□□ -0.39
IFRD1-201ENST00000005558 SPAG11BQ08648 103 aa12.6□□□□□ -0.39
IFRD1-201ENST00000005558 Q6ZR54 194 aa12.6□□□□□ -0.39
IFRD1-201ENST00000005558 HINT1P49773 126 aaPredicted RBP12.59□□□□□ -0.39
IFRD1-201ENST00000005558 BVES-AS1Q5T3Y7 98 aa12.59□□□□□ -0.39
IFRD1-201ENST00000005558 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
IFRD1-201ENST00000005558 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
IFRD1-201ENST00000005558 SPANXB1Q9NS25 103 aaPredicted RBP12.59□□□□□ -0.39
IFRD1-201ENST00000005558 EIF4EBP3O60516 100 aaPredicted RBP12.58□□□□□ -0.4
IFRD1-201ENST00000005558 APOMO95445 188 aa12.58□□□□□ -0.4
IFRD1-201ENST00000005558 WFDC2Q14508 124 aa12.58□□□□□ -0.4
IFRD1-201ENST00000005558 HIGD2BQ4VC39 106 aa12.58□□□□□ -0.4
IFRD1-201ENST00000005558 HSD52Q0P140 79 aa12.58□□□□□ -0.4
IFRD1-201ENST00000005558 LINC00476Q8WZB0 136 aa12.58□□□□□ -0.4
IFRD1-201ENST00000005558 GVQW2A0A096LPI5 108 aaPredicted RBP12.57□□□□□ -0.4
IFRD1-201ENST00000005558 M0R2N4 97 aa12.57□□□□□ -0.4
IFRD1-201ENST00000005558 HERV-K104P63124 156 aa12.57□□□□□ -0.4
IFRD1-201ENST00000005558 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
IFRD1-201ENST00000005558 HYDINQ4G0P3 5121 aa12.56□□□□□ -0.4
IFRD1-201ENST00000005558 TIMM17BO60830 172 aa12.56□□□□□ -0.4
IFRD1-201ENST00000005558 PRSS2P07478 247 aa12.56□□□□□ -0.4
IFRD1-201ENST00000005558 RMI2Q96E14 147 aa12.56□□□□□ -0.4
IFRD1-201ENST00000005558 SLPIP03973 132 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 DAND5Q8N907 189 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 USP17L23D6RBM5 183 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 SMIM13P0DJ93 91 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 FXYD2P54710 66 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 TAL2Q16559 108 aa12.55□□□□□ -0.4
IFRD1-201ENST00000005558 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
IFRD1-201ENST00000005558 CEND1Q8N111 149 aa12.54□□□□□ -0.4
IFRD1-201ENST00000005558 A0A0U1RRA0 63 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 SPANXDQ9BXN6 97 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 SPANXCQ9NY87 97 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 M0R143 59 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 LECT2O14960 151 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 LY6G6CO95867 125 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 CKS1BP61024 79 aa12.53□□□□□ -0.4
IFRD1-201ENST00000005558 SACSQ9NZJ4 4579 aa12.52□□□□□ -0.4
IFRD1-201ENST00000005558 CXCL5P42830 114 aa12.52□□□□□ -0.41
IFRD1-201ENST00000005558 SOSTDC1Q6X4U4 206 aa12.52□□□□□ -0.41
IFRD1-201ENST00000005558 C6orf48Q9UBA6 75 aa12.52□□□□□ -0.41
IFRD1-201ENST00000005558 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
IFRD1-201ENST00000005558 DNAH17Q9UFH2 4485 aa12.51□□□□□ -0.41
IFRD1-201ENST00000005558 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
IFRD1-201ENST00000005558 TMEM238C9JI98 176 aa12.51□□□□□ -0.41
IFRD1-201ENST00000005558 GCSHP23434 173 aa12.51□□□□□ -0.41
IFRD1-201ENST00000005558 SRSF9Q13242 221 aaKnown RBP eCLIP12.51□□□□□ -0.41
IFRD1-201ENST00000005558 MUSTN1Q8IVN3 82 aa12.51□□□□□ -0.41
IFRD1-201ENST00000005558 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
IFRD1-201ENST00000005558 BATFQ16520 125 aa12.5□□□□□ -0.41
IFRD1-201ENST00000005558 SFTA2Q6UW10 78 aa12.5□□□□□ -0.41
IFRD1-201ENST00000005558 Q6ZRU5 148 aa12.5□□□□□ -0.41
IFRD1-201ENST00000005558 C2orf48Q96LS8 159 aa12.5□□□□□ -0.41
IFRD1-201ENST00000005558 ZNF561-AS1K7EIQ3 104 aa12.49□□□□□ -0.41
IFRD1-201ENST00000005558 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
IFRD1-201ENST00000005558 PFN2P35080 140 aa12.48□□□□□ -0.41
IFRD1-201ENST00000005558 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
IFRD1-201ENST00000005558 NPC2P61916 151 aa12.47□□□□□ -0.41
IFRD1-201ENST00000005558 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
IFRD1-201ENST00000005558 LINC00308Q8TCZ7 52 aa12.46□□□□□ -0.41
IFRD1-201ENST00000005558 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.41
IFRD1-201ENST00000005558 FRAS1Q86XX4 4008 aa12.46□□□□□ -0.41
IFRD1-201ENST00000005558 CIRBPQ14011 172 aaKnown RBP12.46□□□□□ -0.42
IFRD1-201ENST00000005558 Q6ZVH6 145 aa12.46□□□□□ -0.42
IFRD1-201ENST00000005558 LINC00158P58513 81 aa12.45□□□□□ -0.42
IFRD1-201ENST00000005558 A4D1N5 150 aa12.44□□□□□ -0.42
IFRD1-201ENST00000005558 SYCNQ0VAF6 134 aa12.44□□□□□ -0.42
IFRD1-201ENST00000005558 TRBV30A0A0K0K1B3 111 aa12.43□□□□□ -0.42
IFRD1-201ENST00000005558 A0A1B0GWB2 263 aa12.43□□□□□ -0.42
IFRD1-201ENST00000005558 F8WDY8 70 aa12.43□□□□□ -0.42
IFRD1-201ENST00000005558 PSCAO43653 123 aa12.43□□□□□ -0.42
IFRD1-201ENST00000005558 COX17Q14061 63 aa12.43□□□□□ -0.42
IFRD1-201ENST00000005558 K7ERJ3 54 aa12.42□□□□□ -0.42
IFRD1-201ENST00000005558 IFITM1P13164 125 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 LOC107984156A0A0G2JMH3 177 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 CFC1P0CG37 223 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 ARL17AQ8IVW1 177 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 Q8NDZ9 215 aa12.41□□□□□ -0.42
IFRD1-201ENST00000005558 PPDPFQ9H3Y8 114 aa12.4□□□□□ -0.42
IFRD1-201ENST00000005558 SND1-IT1Q9HBX3 110 aa12.39□□□□□ -0.43
IFRD1-201ENST00000005558 NHP2Q9NX24 153 aaKnown RBP12.39□□□□□ -0.43
IFRD1-201ENST00000005558 TAX1BP3O14907 124 aa12.39□□□□□ -0.43
IFRD1-201ENST00000005558 FAT2Q9NYQ8 4349 aa12.39□□□□□ -0.43
IFRD1-201ENST00000005558 CARD19Q96LW7 228 aa12.38□□□□□ -0.43
IFRD1-201ENST00000005558 RPL24P83731 157 aaKnown RBP12.37□□□□□ -0.43
IFRD1-201ENST00000005558 RNF151Q2KHN1 245 aa12.37□□□□□ -0.43
IFRD1-201ENST00000005558 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
IFRD1-201ENST00000005558 DNAH11Q96DT5 4516 aa12.37□□□□□ -0.43
IFRD1-201ENST00000005558 CNBPP62633 177 aaKnown RBP12.37□□□□□ -0.43
IFRD1-201ENST00000005558 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
IFRD1-201ENST00000005558 A0A087WTM6 91 aa12.36□□□□□ -0.43
IFRD1-201ENST00000005558 Q6ZRP5 223 aa12.36□□□□□ -0.43
IFRD1-201ENST00000005558 HECTD4Q9Y4D8 3996 aa12.36□□□□□ -0.43
IFRD1-201ENST00000005558 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
IFRD1-201ENST00000005558 A6NDN8 102 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms