RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
PHGDH-232ENST00000641947 J3QQQ9 107 aa11.97□□□□□ -0.49
PHGDH-232ENST00000641947 NHLRC4P0CG21 123 aaPredicted RBP11.97□□□□□ -0.49
PHGDH-232ENST00000641947 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
PHGDH-232ENST00000641947 FBN3Q75N90 2809 aa11.97□□□□□ -0.49
PHGDH-232ENST00000641947 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
PHGDH-232ENST00000641947 ANGP03950 147 aaKnown RBP11.97□□□□□ -0.49
PHGDH-232ENST00000641947 IGHV1-58A0A0C4DH39 117 aa11.96□□□□□ -0.49
PHGDH-232ENST00000641947 SEC11AP67812 179 aa11.96□□□□□ -0.49
PHGDH-232ENST00000641947 PLEKHB2Q96CS7 222 aa11.96□□□□□ -0.49
PHGDH-232ENST00000641947 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 IGLL5B9A064 214 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 C15orf53Q8NAA6 179 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 SIVA1O15304 175 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 IGHV3-30P01768 117 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 IGHV3-30-5P0DP03 117 aa11.95□□□□□ -0.5
PHGDH-232ENST00000641947 IGHV3OR16-9A0A0B4J2B5 98 aa11.94□□□□□ -0.5
PHGDH-232ENST00000641947 REG3AQ06141 175 aa11.94□□□□□ -0.5
PHGDH-232ENST00000641947 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
PHGDH-232ENST00000641947 H3BRM9 83 aa11.93□□□□□ -0.5
PHGDH-232ENST00000641947 CCL25O15444 150 aa11.93□□□□□ -0.5
PHGDH-232ENST00000641947 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
PHGDH-232ENST00000641947 LGALS3P17931 250 aaKnown RBP11.92□□□□□ -0.5
PHGDH-232ENST00000641947 HIGD1BQ9P298 99 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 KLK12Q9UKR0 248 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 LINC00588Q9Y4M8 146 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 TENM2Q9NT68 2774 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 M0R143 59 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 XCL1P47992 114 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 PRR34Q9NV39 138 aa11.92□□□□□ -0.5
PHGDH-232ENST00000641947 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
PHGDH-232ENST00000641947 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
PHGDH-232ENST00000641947 SS18Q15532 418 aa11.9□□□□□ -0.5
PHGDH-232ENST00000641947 BATFQ16520 125 aa11.9□□□□□ -0.5
PHGDH-232ENST00000641947 C10orf126Q8N4M7 172 aa11.9□□□□□ -0.5
PHGDH-232ENST00000641947 C5orf38Q86SI9 138 aa11.9□□□□□ -0.51
PHGDH-232ENST00000641947 A0A087WZ39 114 aa11.89□□□□□ -0.51
PHGDH-232ENST00000641947 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
PHGDH-232ENST00000641947 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-232ENST00000641947 ZFAND6Q6FIF0 208 aa11.88□□□□□ -0.51
PHGDH-232ENST00000641947 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
PHGDH-232ENST00000641947 HSD52Q0P140 79 aa11.87□□□□□ -0.51
PHGDH-232ENST00000641947 NDUFA12Q9UI09 145 aa11.87□□□□□ -0.51
PHGDH-232ENST00000641947 SCGB1D4Q6XE38 83 aa11.86□□□□□ -0.51
PHGDH-232ENST00000641947 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
PHGDH-232ENST00000641947 TGP01266 2768 aa11.86□□□□□ -0.51
PHGDH-232ENST00000641947 FOXI1Q12951 378 aa11.85□□□□□ -0.51
PHGDH-232ENST00000641947 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
PHGDH-232ENST00000641947 UBE2WQ96B02 151 aa11.85□□□□□ -0.51
PHGDH-232ENST00000641947 VPS13DQ5THJ4 4388 aa11.85□□□□□ -0.51
PHGDH-232ENST00000641947 A0A0J9YXY3 114 aa11.84□□□□□ -0.51
PHGDH-232ENST00000641947 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
PHGDH-232ENST00000641947 K7EP13 123 aa11.84□□□□□ -0.51
PHGDH-232ENST00000641947 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
PHGDH-232ENST00000641947 NDUFA1O15239 70 aa11.83□□□□□ -0.52
PHGDH-232ENST00000641947 CCL18P55774 89 aa11.83□□□□□ -0.52
PHGDH-232ENST00000641947 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 CRPP02741 224 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-232ENST00000641947 LITAFQ99732 161 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 FXYD2P54710 66 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 Q9H8V8 135 aa11.82□□□□□ -0.52
PHGDH-232ENST00000641947 GCSHP23434 173 aa11.81□□□□□ -0.52
PHGDH-232ENST00000641947 KRTAP26-1Q6PEX3 210 aa11.81□□□□□ -0.52
PHGDH-232ENST00000641947 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
PHGDH-232ENST00000641947 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
PHGDH-232ENST00000641947 TOMM7Q9P0U1 55 aa11.81□□□□□ -0.52
PHGDH-232ENST00000641947 COX7A2LO14548 114 aa11.8□□□□□ -0.52
PHGDH-232ENST00000641947 CEND1Q8N111 149 aa11.8□□□□□ -0.52
PHGDH-232ENST00000641947 MIAQ16674 131 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 SPANXB1Q9NS25 103 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-232ENST00000641947 TAL2Q16559 108 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 LINC01561Q8N1V8 128 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
PHGDH-232ENST00000641947 TRAV8-4A0A0B4J246 113 aa11.78□□□□□ -0.52
PHGDH-232ENST00000641947 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
PHGDH-232ENST00000641947 LBHQ53QV2 105 aaPredicted RBP11.77□□□□□ -0.52
PHGDH-232ENST00000641947 KIAA0087Q14695 138 aa11.77□□□□□ -0.53
PHGDH-232ENST00000641947 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
PHGDH-232ENST00000641947 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
PHGDH-232ENST00000641947 Q6ZVH6 145 aa11.76□□□□□ -0.53
PHGDH-232ENST00000641947 MALP21145 153 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 Q8IZM0 81 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 DAND5Q8N907 189 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 Q9HAA7 133 aa11.74□□□□□ -0.53
PHGDH-232ENST00000641947 KLK5Q9Y337 293 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-232ENST00000641947 IBA57-AS1B1ANH7 110 aa11.73□□□□□ -0.53
PHGDH-232ENST00000641947 EIF4EBP3O60516 100 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-232ENST00000641947 KRTAP1-5Q9BYS1 174 aa11.73□□□□□ -0.53
PHGDH-232ENST00000641947 A0A0U1RRA0 63 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 K7ERJ3 54 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 TIMM17BO60830 172 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms