RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 PPP1R17O96001 155 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 TLX1NBP0CAT3 122 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 CTRLP40313 264 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 RPL28P46779 137 aaKnown RBP4.52□□□□□ -1.69
PHGDH-217ENST00000641455 ASB16-AS1Q495Z4 193 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 EIF5A2Q9GZV4 153 aaKnown RBP4.52□□□□□ -1.69
PHGDH-217ENST00000641455 C6orf48Q9UBA6 75 aa4.52□□□□□ -1.69
PHGDH-217ENST00000641455 C7orf77A4D0Y5 90 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
PHGDH-217ENST00000641455 CFC1BP0CG36 223 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
PHGDH-217ENST00000641455 TMEM241Q24JQ0 296 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 MRPL52Q86TS9 123 aaKnown RBP4.51□□□□□ -1.69
PHGDH-217ENST00000641455 OCC1Q8TAD7 63 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 RNASE7Q9H1E1 156 aaKnown RBP4.51□□□□□ -1.69
PHGDH-217ENST00000641455 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
PHGDH-217ENST00000641455 IGKV2D-26A0A0A0MRZ7 120 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 F8WDY8 70 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 FCER1GP30273 86 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 CT83Q5H943 113 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 FAM231DQ6ZW35 169 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 AKAP14Q86UN6 197 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 TMEM18Q96B42 140 aa4.5□□□□□ -1.69
PHGDH-217ENST00000641455 TRBV20OR9-2A0A075B6H5 130 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 A0A1B0GUT8 65 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 RIGQ13278 110 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 LBHQ53QV2 105 aaPredicted RBP4.49□□□□□ -1.69
PHGDH-217ENST00000641455 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
PHGDH-217ENST00000641455 LINC00242Q5T6M2 205 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 SMIM7Q9BQ49 75 aa4.49□□□□□ -1.69
PHGDH-217ENST00000641455 A0A1B0GVG6 124 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 ZNF727A8MUV8 499 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 VCYO14598 125 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 TCAPO15273 167 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 BCE1O60756 84 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
PHGDH-217ENST00000641455 ALKAL2Q6UX46 152 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 Q6ZUT4 128 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 TMEM191AQ9H0A3 160 aa4.48□□□□□ -1.69
PHGDH-217ENST00000641455 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 HIGD1CA8MV81 97 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 K7EN84 100 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 PPP1R2P9O14990 202 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 FAM74A3Q4VXF1 159 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 PACRGQ96M98 296 aaPredicted RBP4.47□□□□□ -1.69
PHGDH-217ENST00000641455 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 C22orf24Q9Y442 160 aa4.47□□□□□ -1.69
PHGDH-217ENST00000641455 S100A8P05109 93 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 UBE2AP49459 152 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 MT1HP80294 61 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 FAM229BQ4G0N7 80 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
PHGDH-217ENST00000641455 LINC00469Q8N7U9 141 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 OSTCQ9NRP0 149 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 NAT8BQ9UHF3 227 aa4.46□□□□□ -1.7
PHGDH-217ENST00000641455 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 TRBV27A0A0K0K1C4 114 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 A0A1B0GW15 77 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 LINC00862A6NCI5 91 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 F8W036 122 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 RAB4AP20338 218 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 C2orf82Q6UX34 121 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 LINC01551Q86U37 167 aa4.45□□□□□ -1.7
PHGDH-217ENST00000641455 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
PHGDH-217ENST00000641455 hCG_2014768A0A024R1R8 64 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 TGIF2-C20orf24A0A0A6YYL0 155 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 RPL37AP8A6NKH3 93 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
PHGDH-217ENST00000641455 CTAG1AP78358 180 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 PEA15Q15121 130 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
PHGDH-217ENST00000641455 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
PHGDH-217ENST00000641455 IGHV3OR16-9A0A0B4J2B5 98 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 IFITM10A6NMD0 228 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 M0R2T5 61 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 RAB5AP20339 215 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 LORP23490 312 aaPredicted RBP4.43□□□□□ -1.7
PHGDH-217ENST00000641455 CKS2P33552 79 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 POLR2KP53803 58 aaKnown RBP4.43□□□□□ -1.7
PHGDH-217ENST00000641455 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
PHGDH-217ENST00000641455 C4orf48Q5BLP8 95 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
PHGDH-217ENST00000641455 GAGE10A6NGK3 116 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 KIAA0087Q14695 138 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 ADIRFQ15847 76 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 SPAG11AQ6PDA7 123 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 C3orf22Q8N5N4 141 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 NAT8Q9UHE5 227 aa4.42□□□□□ -1.7
PHGDH-217ENST00000641455 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
PHGDH-217ENST00000641455 PPBPP02775 128 aa4.41□□□□□ -1.7
PHGDH-217ENST00000641455 PRSS2P07478 247 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms