RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PIK3CD-AS1Q5SR53 167 aa11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
HNRNPU-228ENST00000640306 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
HNRNPU-228ENST00000640306 K7EQD1 137 aa11.8□□□□□ -0.52
HNRNPU-228ENST00000640306 IFITM1P13164 125 aa11.8□□□□□ -0.52
HNRNPU-228ENST00000640306 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
HNRNPU-228ENST00000640306 H3BT86 120 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 IGLV5-39A0A0G2JS06 123 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 TIMM17BO60830 172 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 GAGE7O76087 117 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 RPL35AP18077 110 aaKnown RBP11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
HNRNPU-228ENST00000640306 B5MCH6 92 aa11.78□□□□□ -0.52
HNRNPU-228ENST00000640306 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
HNRNPU-228ENST00000640306 NBEAL2Q6ZNJ1 2754 aa11.78□□□□□ -0.52
HNRNPU-228ENST00000640306 NDUFV3P56181 108 aaKnown RBP11.78□□□□□ -0.52
HNRNPU-228ENST00000640306 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
HNRNPU-228ENST00000640306 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.53
HNRNPU-228ENST00000640306 CCL24O00175 119 aa11.76□□□□□ -0.53
HNRNPU-228ENST00000640306 UBE2L6O14933 153 aa11.76□□□□□ -0.53
HNRNPU-228ENST00000640306 GAGE6Q13070 117 aa11.75□□□□□ -0.53
HNRNPU-228ENST00000640306 CCDC179H3BU77 68 aa11.74□□□□□ -0.53
HNRNPU-228ENST00000640306 F5H768 121 aa11.74□□□□□ -0.53
HNRNPU-228ENST00000640306 DNAJC9-AS1A6NH13 148 aa11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 COX7A2LO14548 114 aa11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 IL17DQ8TAD2 202 aa11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 FAM218AQ96MZ4 157 aa11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
HNRNPU-228ENST00000640306 LINC01600Q96MT4 127 aa11.72□□□□□ -0.53
HNRNPU-228ENST00000640306 Q9HAA7 133 aa11.72□□□□□ -0.53
HNRNPU-228ENST00000640306 ESM1Q9NQ30 184 aa11.72□□□□□ -0.53
HNRNPU-228ENST00000640306 TRBV10-1A0A0K0K1A3 114 aa11.71□□□□□ -0.53
HNRNPU-228ENST00000640306 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.54
HNRNPU-228ENST00000640306 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.54
HNRNPU-228ENST00000640306 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
HNRNPU-228ENST00000640306 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
HNRNPU-228ENST00000640306 TRGV4A0A0C4DH28 118 aa11.7□□□□□ -0.54
HNRNPU-228ENST00000640306 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
HNRNPU-228ENST00000640306 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
HNRNPU-228ENST00000640306 BAALC-AS2P0C853 105 aa11.68□□□□□ -0.54
HNRNPU-228ENST00000640306 LINC00158P58513 81 aa11.68□□□□□ -0.54
HNRNPU-228ENST00000640306 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
HNRNPU-228ENST00000640306 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
HNRNPU-228ENST00000640306 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
HNRNPU-228ENST00000640306 PFN2P35080 140 aa11.67□□□□□ -0.54
HNRNPU-228ENST00000640306 C3orf56Q8N813 242 aa11.67□□□□□ -0.54
HNRNPU-228ENST00000640306 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
HNRNPU-228ENST00000640306 TRAV25A0A0B4J276 109 aa11.66□□□□□ -0.54
HNRNPU-228ENST00000640306 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
HNRNPU-228ENST00000640306 SMR3AQ99954 134 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 CRPP02741 224 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 HERV-K104P63124 156 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 SMCR5Q8TEV8 140 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 SND1-IT1Q9HBX3 110 aa11.65□□□□□ -0.54
HNRNPU-228ENST00000640306 DEFB121Q5J5C9 76 aa11.64□□□□□ -0.55
HNRNPU-228ENST00000640306 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
HNRNPU-228ENST00000640306 Q6Q795 121 aa11.64□□□□□ -0.55
HNRNPU-228ENST00000640306 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
HNRNPU-228ENST00000640306 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 IGKV2-28A0A075B6P5 120 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 IGKV2D-28P01615 120 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 A0A096LPF7 62 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 FAM240AA0A1B0GVK7 77 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 C16orf74Q96GX8 76 aa11.63□□□□□ -0.55
HNRNPU-228ENST00000640306 ATP5G1P05496 136 aa11.62□□□□□ -0.55
HNRNPU-228ENST00000640306 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
HNRNPU-228ENST00000640306 LINC01006Q8NI28 216 aa11.62□□□□□ -0.55
HNRNPU-228ENST00000640306 GAGE2AQ6NT46 116 aa11.61□□□□□ -0.55
HNRNPU-228ENST00000640306 A0A087WYN8 130 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 TRACP01848 142 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 CCL18P55774 89 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 OR13C6PQ8NH95 151 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 SMIM11BQ8TCY0 68 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 HIVEP2P31629 2446 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
HNRNPU-228ENST00000640306 TRAV13-2A0A0B4J235 113 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 TRBV6-4A0A1B0GX49 114 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 FHL2Q14192 279 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 PAX4O43316 350 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 XCL1P47992 114 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
HNRNPU-228ENST00000640306 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
HNRNPU-228ENST00000640306 TMEM86BQ8N661 226 aa11.58□□□□□ -0.56
HNRNPU-228ENST00000640306 VWFP04275 2813 aa11.58□□□□□ -0.56
HNRNPU-228ENST00000640306 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms