RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
GTF3A-209ENST00000640289 DNAH5Q8TE73 4624 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
GTF3A-209ENST00000640289 COX6A2Q02221 97 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
GTF3A-209ENST00000640289 DYNC1H1Q14204 4646 aaKnown RBP8.62□□□□□ -1.03
GTF3A-209ENST00000640289 COX7A2LO14548 114 aa8.62□□□□□ -1.03
GTF3A-209ENST00000640289 HIGD2BQ4VC39 106 aa8.62□□□□□ -1.03
GTF3A-209ENST00000640289 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
GTF3A-209ENST00000640289 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 MALP21145 153 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
GTF3A-209ENST00000640289 IGHV1-58A0A0C4DH39 117 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 NDUFA6P56556 154 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 PMVKQ15126 192 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 LINC01620Q4KN68 170 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 CFAP161Q6P656 301 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 FAM19A3Q7Z5A8 133 aa8.6□□□□□ -1.03
GTF3A-209ENST00000640289 ATP5LO75964 103 aa8.59□□□□□ -1.03
GTF3A-209ENST00000640289 SLPIP03973 132 aa8.59□□□□□ -1.03
GTF3A-209ENST00000640289 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
GTF3A-209ENST00000640289 PKHD1P08F94 4074 aa8.59□□□□□ -1.04
GTF3A-209ENST00000640289 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
GTF3A-209ENST00000640289 GCSHP23434 173 aa8.58□□□□□ -1.04
GTF3A-209ENST00000640289 KRTAP10-1P60331 282 aa8.58□□□□□ -1.04
GTF3A-209ENST00000640289 IFI27L1Q96BM0 104 aa8.58□□□□□ -1.04
GTF3A-209ENST00000640289 A0A087WZ39 114 aa8.57□□□□□ -1.04
GTF3A-209ENST00000640289 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
GTF3A-209ENST00000640289 HERVK_113P63121 156 aa8.57□□□□□ -1.04
GTF3A-209ENST00000640289 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
GTF3A-209ENST00000640289 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 APOMO95445 188 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 FABP4P15090 132 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
GTF3A-209ENST00000640289 SEC11AP67812 179 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
GTF3A-209ENST00000640289 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
GTF3A-209ENST00000640289 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
GTF3A-209ENST00000640289 ZNF561-AS1K7EIQ3 104 aa8.55□□□□□ -1.04
GTF3A-209ENST00000640289 SPAG11BQ08648 103 aa8.55□□□□□ -1.04
GTF3A-209ENST00000640289 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
GTF3A-209ENST00000640289 H0Y8G0 127 aa8.54□□□□□ -1.04
GTF3A-209ENST00000640289 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
GTF3A-209ENST00000640289 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
GTF3A-209ENST00000640289 C9orf163Q8N9P6 203 aa8.54□□□□□ -1.04
GTF3A-209ENST00000640289 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
GTF3A-209ENST00000640289 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
GTF3A-209ENST00000640289 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
GTF3A-209ENST00000640289 LINC01561Q8N1V8 128 aa8.53□□□□□ -1.04
GTF3A-209ENST00000640289 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
GTF3A-209ENST00000640289 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
GTF3A-209ENST00000640289 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
GTF3A-209ENST00000640289 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
GTF3A-209ENST00000640289 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
GTF3A-209ENST00000640289 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 SPINK8P0C7L1 97 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
GTF3A-209ENST00000640289 SYCNQ0VAF6 134 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 KIAA0087Q14695 138 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 Q6ZRU5 148 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
GTF3A-209ENST00000640289 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
GTF3A-209ENST00000640289 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
GTF3A-209ENST00000640289 ODF1Q14990 250 aa8.5□□□□□ -1.05
GTF3A-209ENST00000640289 C2orf48Q96LS8 159 aa8.5□□□□□ -1.05
GTF3A-209ENST00000640289 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
GTF3A-209ENST00000640289 F8VRH5 84 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 HAMPP81172 84 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
GTF3A-209ENST00000640289 H3BRM9 83 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 RYR1P21817 5038 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 KIAA1109Q2LD37 5005 aa8.48□□□□□ -1.05
GTF3A-209ENST00000640289 NDUFA1O15239 70 aa8.47□□□□□ -1.05
GTF3A-209ENST00000640289 PRSS2P07478 247 aa8.47□□□□□ -1.05
GTF3A-209ENST00000640289 XGP55808 180 aa8.47□□□□□ -1.05
GTF3A-209ENST00000640289 Q6ZSA8 131 aa8.47□□□□□ -1.05
GTF3A-209ENST00000640289 Q8IZM0 81 aa8.47□□□□□ -1.05
GTF3A-209ENST00000640289 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
GTF3A-209ENST00000640289 PANO1I0J062 215 aa8.46□□□□□ -1.06
GTF3A-209ENST00000640289 CDK2AP2O75956 126 aa8.46□□□□□ -1.06
GTF3A-209ENST00000640289 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.06
GTF3A-209ENST00000640289 COX7B2Q8TF08 81 aa8.46□□□□□ -1.06
GTF3A-209ENST00000640289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms