RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 SSNA1O43805 119 aa6.15□□□□□ -1.42
PTP4A1-207ENST00000639568 PAGE4O60829 102 aa6.15□□□□□ -1.42
PTP4A1-207ENST00000639568 TMUB2Q71RG4 321 aa6.15□□□□□ -1.42
PTP4A1-207ENST00000639568 PACRGQ96M98 296 aaPredicted RBP6.15□□□□□ -1.42
PTP4A1-207ENST00000639568 PFDN1O60925 122 aa6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 MRPL55Q7Z7F7 128 aaKnown RBP6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 C9orf62Q8N4C0 152 aa6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 NDUFA12Q9UI09 145 aa6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 CSDC2Q9Y534 153 aaKnown RBP6.14□□□□□ -1.43
PTP4A1-207ENST00000639568 XP32Q5T750 250 aa6.13□□□□□ -1.43
PTP4A1-207ENST00000639568 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
PTP4A1-207ENST00000639568 MARVELD1Q9BSK0 173 aa6.13□□□□□ -1.43
PTP4A1-207ENST00000639568 RNASE7Q9H1E1 156 aaKnown RBP6.13□□□□□ -1.43
PTP4A1-207ENST00000639568 BORCS7-ASMTA0A0B4J1R7 106 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 TRBV6-5A0A0K0K1A5 114 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 RPL37AP8A6NKH3 93 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 FCER1GP30273 86 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 LINC00469Q8N7U9 141 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
PTP4A1-207ENST00000639568 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 IGHV3OR16-9A0A0B4J2B5 98 aa6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 TNFRSF6BO95407 300 aa6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 RPL35P42766 123 aaKnown RBP6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 FOXA3P55318 350 aaPredicted RBP6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 C3orf22Q8N5N4 141 aa6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 ENKURQ8TC29 256 aa6.11□□□□□ -1.43
PTP4A1-207ENST00000639568 RAB19A4D1S5 217 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 ZNF727A8MUV8 499 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 UPK1BO75841 260 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 RPL7L1Q6DKI1 246 aaKnown RBP6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 C2orf82Q6UX34 121 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 Q6ZUT4 128 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 NUDT10Q8NFP7 164 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 NUDT11Q96G61 164 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
PTP4A1-207ENST00000639568 TRBV27A0A0K0K1C4 114 aa6.09□□□□□ -1.43
PTP4A1-207ENST00000639568 CNFNQ9BYD5 112 aa6.09□□□□□ -1.43
PTP4A1-207ENST00000639568 TGIF2-C20orf24A0A0A6YYL0 155 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 KIAA0087Q14695 138 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 CENPWQ5EE01 88 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 TMEM18Q96B42 140 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
PTP4A1-207ENST00000639568 GAGE10A6NGK3 116 aa6.07□□□□□ -1.44
PTP4A1-207ENST00000639568 VCYO14598 125 aa6.07□□□□□ -1.44
PTP4A1-207ENST00000639568 A0A1B0GV50 99 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 SPINK1P00995 79 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 GNG4P50150 75 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 POLR2KP53803 58 aaKnown RBP6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 PCOTHQ58A44 107 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 SFT2D1Q8WV19 159 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 BIN3Q9NQY0 253 aa6.06□□□□□ -1.44
PTP4A1-207ENST00000639568 CKS1BP61024 79 aa6.05□□□□□ -1.44
PTP4A1-207ENST00000639568 FAM19A2Q8N3H0 131 aa6.05□□□□□ -1.44
PTP4A1-207ENST00000639568 KCNRGQ8N5I3 272 aa6.05□□□□□ -1.44
PTP4A1-207ENST00000639568 TIMM21Q9BVV7 248 aa6.05□□□□□ -1.44
PTP4A1-207ENST00000639568 IFITM10A6NMD0 228 aa6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 PRSS2P07478 247 aa6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 RPL32P62910 135 aaKnown RBP6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 PRLHP81277 87 aa6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 PNRC1Q12796 327 aaPredicted RBP6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 Q8NBF4 154 aa6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 SMIM12Q96EX1 92 aa6.04□□□□□ -1.44
PTP4A1-207ENST00000639568 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
PTP4A1-207ENST00000639568 HBBP68871 147 aa6.03□□□□□ -1.44
PTP4A1-207ENST00000639568 CFC1P0CG37 223 aa6.02□□□□□ -1.45
PTP4A1-207ENST00000639568 PLEKHB2Q96CS7 222 aa6.02□□□□□ -1.45
PTP4A1-207ENST00000639568 C6orf226Q5I0X4 101 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 FAM19A1Q7Z5A9 133 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 FAM213BQ8TBF2 198 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 TOMM7Q9P0U1 55 aa6.01□□□□□ -1.45
PTP4A1-207ENST00000639568 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 IGKV2D-28P01615 120 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 CCL20P78556 96 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 CBLN2Q8IUK8 224 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 C11orf52Q96A22 123 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
PTP4A1-207ENST00000639568 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 SLC25A20O43772 301 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 PPP1R17O96001 155 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 MBD3L1Q8WWY6 194 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 BORCS7Q96B45 105 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 SPANXA1Q9NS26 97 aa5.99□□□□□ -1.45
PTP4A1-207ENST00000639568 SUMO2P61956 95 aaKnown RBP5.98□□□□□ -1.45
PTP4A1-207ENST00000639568 RPL39P62891 51 aaKnown RBP5.98□□□□□ -1.45
PTP4A1-207ENST00000639568 MRPS36P82909 103 aaKnown RBP5.98□□□□□ -1.45
PTP4A1-207ENST00000639568 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
PTP4A1-207ENST00000639568 FXYD6-FXYD2A0A087WZ82 144 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 Q8N377 158 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 HIGD2AQ9BW72 106 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 MANBALQ9NQG1 85 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 GNG13Q9P2W3 67 aa5.97□□□□□ -1.45
PTP4A1-207ENST00000639568 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms