RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 TMEM86BQ8N661 226 aa6.79□□□□□ -1.32
HNRNPU-216ENST00000638716 NBPF19A0A087WUL8 3843 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 COPS9Q8WXC6 57 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 ABCA12Q86UK0 2595 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 TLN2Q9Y4G6 2542 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 COX7A2LO14548 114 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 NHLRC4P0CG21 123 aaPredicted RBP6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 Q6Q795 121 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 C1orf43Q9BWL3 253 aa6.78□□□□□ -1.32
HNRNPU-216ENST00000638716 LRRK2Q5S007 2527 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 DNAJC9-AS1A6NH13 148 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 UBE2L6O14933 153 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 HECTD1Q9ULT8 2610 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 HERV-K104P63124 156 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
HNRNPU-216ENST00000638716 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
HNRNPU-216ENST00000638716 SONP18583 2426 aaKnown RBP6.76□□□□□ -1.33
HNRNPU-216ENST00000638716 LOC100131303A0A0U1RQF7 123 aa6.76□□□□□ -1.33
HNRNPU-216ENST00000638716 FAM240AA0A1B0GVK7 77 aa6.76□□□□□ -1.33
HNRNPU-216ENST00000638716 PLAC8L1A1L4L8 177 aa6.76□□□□□ -1.33
HNRNPU-216ENST00000638716 GAGE7O76087 117 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 GAGE12FP0CL80 117 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 GAGE12GP0CL81 117 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 GAGE12IP0CL82 117 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 MRPL23Q16540 153 aaKnown RBP6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 WFDC10AQ9H1F0 79 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 ESM1Q9NQ30 184 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
HNRNPU-216ENST00000638716 C2CD3Q4AC94 2353 aa6.74□□□□□ -1.33
HNRNPU-216ENST00000638716 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
HNRNPU-216ENST00000638716 RPL35AP18077 110 aaKnown RBP6.74□□□□□ -1.33
HNRNPU-216ENST00000638716 GAGE6Q13070 117 aa6.74□□□□□ -1.33
HNRNPU-216ENST00000638716 NF1P21359 2839 aa6.74□□□□□ -1.33
HNRNPU-216ENST00000638716 TRBV6-4A0A1B0GX49 114 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 TRACP01848 142 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 COX7B2Q8TF08 81 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
HNRNPU-216ENST00000638716 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 IGKV3OR2-268A0A0C4DH90 116 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 WFDC11Q8NEX6 87 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 APCP25054 2843 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 BAALC-AS2P0C853 105 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 HIST2H2BCQ6DN03 193 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 CSNK1G2-AS1Q8NCQ2 148 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 C19orf73Q9NVV2 129 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 JMJD1CQ15652 2540 aa6.72□□□□□ -1.33
HNRNPU-216ENST00000638716 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.33
HNRNPU-216ENST00000638716 TRAV13-2A0A0B4J235 113 aa6.71□□□□□ -1.34
HNRNPU-216ENST00000638716 B5MCH6 92 aa6.71□□□□□ -1.34
HNRNPU-216ENST00000638716 ACYP1P07311 99 aa6.71□□□□□ -1.34
HNRNPU-216ENST00000638716 C22orf24Q9Y442 160 aa6.71□□□□□ -1.34
HNRNPU-216ENST00000638716 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 CCDC179H3BU77 68 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 FHL2Q14192 279 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 LINC01006Q8NI28 216 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 F8WDY8 70 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 IGLV1-51P01701 117 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 CRPP02741 224 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 FAM222AQ5U5X8 452 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
HNRNPU-216ENST00000638716 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
HNRNPU-216ENST00000638716 TRBV7-7A0A0K0K1E9 115 aa6.69□□□□□ -1.34
HNRNPU-216ENST00000638716 FAM110AQ9BQ89 295 aa6.69□□□□□ -1.34
HNRNPU-216ENST00000638716 LINC00158P58513 81 aa6.69□□□□□ -1.34
HNRNPU-216ENST00000638716 CHCHD5Q9BSY4 110 aa6.69□□□□□ -1.34
HNRNPU-216ENST00000638716 SMCR5Q8TEV8 140 aa6.68□□□□□ -1.34
HNRNPU-216ENST00000638716 Q9HAA7 133 aa6.68□□□□□ -1.34
HNRNPU-216ENST00000638716 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 A0A087WZ39 114 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 CCL18P55774 89 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 C5orf38Q86SI9 138 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 SMIM11BQ8TCY0 68 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 C16orf95Q9H693 158 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 SETD2Q9BYW2 2564 aaPredicted RBP6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 MALP21145 153 aa6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 NIPBLQ6KC79 2804 aaeCLIP6.67□□□□□ -1.34
HNRNPU-216ENST00000638716 IBA57-AS1B1ANH7 110 aa6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 ANK3Q12955 4377 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 CCDC168Q8NDH2 2452 aa6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 A0A087WYN8 130 aa6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 PFN2P35080 140 aa6.66□□□□□ -1.34
HNRNPU-216ENST00000638716 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
HNRNPU-216ENST00000638716 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
HNRNPU-216ENST00000638716 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms